Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G11031 Trifolium pratense HOM05D000922 ORTHO05D008200 1.1e-46 189.5 92 100.0
Glyma.17G088100 Glycine max HOM05D000922 ORTHO05D008200 1.4e-41 172.6 92 90.2
Ca_21935_v3 Cicer arietinum L. HOM05D000922 ORTHO05D008200 1.9e-41 172.2 92 90.2
Psat4g058400 Pisum sativum HOM05D000922 ORTHO05D008200 2.1e-40 168.7 92 92.4
Lalb_Chr12g0201661 Lupinus albus HOM05D000922 ORTHO05D008200 5.2e-39 164.1 92 87.0
Lj4g0019609 Lotus japonicus HOM05D000922 ORTHO05D008200 1.1e-38 162.9 92 83.7
Medtr4g105570 Medicago truncatula HOM05D000922 ORTHO05D008200 5.7e-38 160.6 91 90.1
VMungo1215G1163 Vigna mungo HOM05D000922 ORTHO05D008200 3.7e-37 157.9 92 87.0
arahy.Tifrunner.gnm1.ann1.RA2V7W Arachis hypogaea HOM05D000922 ORTHO05D008200 3.5e-35 151.4 92 78.3
arahy.Tifrunner.gnm1.ann1.HJA5XH Arachis hypogaea HOM05D000922 ORTHO05D008200 1.0e-34 149.8 92 77.2
Phvul.003G201800 Phaseolus vulgaris HOM05D000922 ORTHO05D008200 1.7e-34 149.1 92 82.6
RcHm_v2.0_Chr7g0193351 Rosa chinensis HOM05D000922 ORTHO05D008200 3.8e-34 147.9 92 75.0
arahy.Tifrunner.gnm1.ann1.UWQ2W3 Arachis hypogaea HOM05D000922 ORTHO05D008200 3.2e-33 144.8 92 75.0
Prupe.5G171600 Prunus persica HOM05D000922 ORTHO05D008200 4.2e-33 144.4 92 77.2
Atru.chr9.2496 Acer truncatum HOM05D000922 ORTHO05D008200 2.1e-32 142.1 93 74.2
Duzib205G0455 Durio zibethinus HOM05D000922 ORTHO05D008200 2.1e-32 142.1 92 76.1
Gohir.A09G171300 Gossypium hirsutum HOM05D000922 ORTHO05D008200 2.1e-32 142.1 92 77.2
Manes.05G195400 Manihot esculenta HOM05D000922 ORTHO05D008200 2.1e-32 142.1 90 75.6
Gohir.D09G167000 Gossypium hirsutum HOM05D000922 ORTHO05D008200 4.7e-32 141.0 92 76.1
Gorai.006G188800 Gossypium raimondii HOM05D000922 ORTHO05D008200 4.7e-32 141.0 92 76.1
TWI39G0231 Tripterygium wilfordii HOM05D000922 ORTHO05D008200 8.0e-32 140.2 92 78.3
MD14G1178100 Malus domestica HOM05D000922 ORTHO05D008200 1.0e-31 139.8 92 75.0
COL.COLO4_30070 Corchorus olitorius HOM05D000922 ORTHO05D008200 1.4e-31 139.4 92 75.0
CANSAT80G0818 Cannabis sativa HOM05D000922 ORTHO05D008200 1.8e-31 139.0 92 72.8
Manes.14G064200 Manihot esculenta HOM05D000922 ORTHO05D008200 6.7e-31 137.1 89 74.2
CiPaw.11G024500 Carya illinoinensis HOM05D000922 ORTHO05D008200 8.8e-31 136.7 93 75.3
arahy.Tifrunner.gnm1.ann1.R1G0J4 Arachis hypogaea HOM05D000922 ORTHO05D008200 1.2e-30 136.3 99 68.7
CSS0000249 Camellia sinensis var. sinensis HOM05D000922 ORTHO05D008200 1.2e-30 136.3 93 73.1
Thecc.03G014600 Theobroma cacao HOM05D000922 ORTHO05D008200 1.2e-30 136.3 92 73.9
MD06G1172200 Malus domestica HOM05D000922 ORTHO05D008200 1.5e-30 136.0 91 73.6
Dinv20636 Davidia involucrata HOM05D000922 ORTHO05D008200 2.0e-30 135.6 92 70.7
Nn3g16820 Nelumbo nucifera HOM05D000922 ORTHO05D008200 2.0e-30 135.6 93 73.1
QL10p010977 Quercus lobata HOM05D000922 ORTHO05D008200 2.6e-30 135.2 91 73.6
Actinidia04732 Actinidia chinensis HOM05D000922 ORTHO05D007418 4.4e-30 134.4 90 74.4
Nitab4.5_0000514g0030 Nicotiana tabacum HOM05D000922 ORTHO05D008200 5.7e-30 134.0 92 72.8
Nitab4.5_0008678g0030 Nicotiana tabacum HOM05D000922 ORTHO05D008200 5.7e-30 134.0 92 72.8
Sabra15G0103100 Salix brachista HOM05D000922 ORTHO05D008200 9.7e-30 133.3 91 71.4
Solyc03g112810.3 Solanum lycopersicum HOM05D000922 ORTHO05D008200 9.7e-30 133.3 91 72.5
CAN.G1166.6 Capsicum annuum HOM05D000922 ORTHO05D008200 1.3e-29 132.9 91 72.5
Eucgr.G00068 Eucalyptus grandis HOM05D000922 ORTHO05D008200 1.3e-29 132.9 93 69.9
arahy.Tifrunner.gnm1.ann1.3C9G4H Arachis hypogaea HOM05D000922 ORTHO05D008200 1.7e-29 132.5 88 72.7
Lj5C125T23 Lonicera japonica HOM05D000922 ORTHO05D008200 2.2e-29 132.1 93 72.0
Hund09449 Selenicereus undatus HOM05D000922 ORTHO05D008200 2.2e-29 132.1 93 72.0
Sopen03g031890 Solanum pennellii HOM05D000922 ORTHO05D008200 2.8e-29 131.7 91 71.4
FAN04G0130 Fragaria x ananassa HOM05D000922 ORTHO05D008200 4.8e-29 131.0 92 69.6
Sed0005243 Sechium edule HOM05D000922 ORTHO05D008200 4.8e-29 131.0 93 74.2
DCAR_026150 Daucus carota HOM05D000922 ORTHO05D008200 6.3e-29 130.6 93 72.0
FAN13G3248 Fragaria x ananassa HOM05D000922 ORTHO05D008200 6.3e-29 130.6 92 69.6
AUR62010095 Chenopodium quinoa HOM05D000922 ORTHO05D008200 8.2e-29 130.2 93 67.7
AUR62013091 Chenopodium quinoa HOM05D000922 ORTHO05D008200 8.2e-29 130.2 93 67.7
MELO3C002273.2 Cucumis melo HOM05D000922 ORTHO05D008200 8.2e-29 130.2 94 71.3
CsaV3_1G008590 Cucumis sativus L. HOM05D000922 ORTHO05D008200 8.2e-29 130.2 94 71.3
PGSC0003DMG400018154 Solanum tuberosum HOM05D000922 ORTHO05D008200 8.2e-29 130.2 91 71.4
GSVIVG01007722001 Vitis vinifera HOM05D000922 ORTHO05D008200 8.2e-29 130.2 93 69.9
FvH4_5g05480 Fragaria vesca HOM05D000922 ORTHO05D008200 1.1e-28 129.8 92 69.6
FAN18G2418 Fragaria x ananassa HOM05D000922 ORTHO05D008200 1.1e-28 129.8 92 69.6
FAN18G3465 Fragaria x ananassa HOM05D000922 ORTHO05D008200 1.1e-28 129.8 92 69.6
ClCG01G013230 Citrullus lanatus HOM05D000922 ORTHO05D008200 1.4e-28 129.4 94 72.3
MSTRG.11466 Avicennia marina HOM05D000922 ORTHO05D008200 1.8e-28 129.0 93 68.8
Potri.015G078600 Populus trichocarpa HOM05D000922 ORTHO05D008200 2.4e-28 128.6 91 69.2
PGR044G1577 Punica granatum HOM05D000922 ORTHO05D008200 2.4e-28 128.6 93 68.8
THA.LOC104818216 Tarenaya hassleriana HOM05D000922 ORTHO05D008200 3.1e-28 128.3 88 72.7
TAR629G0323 Trochodendron aralioides HOM05D000922 ORTHO05D008200 4.1e-28 127.9 93 66.7
HPP92_011872 Vanilla planifolia HOM05D000922 ORTHO05D008200 4.1e-28 127.9 92 67.4
TAR371G0469 Trochodendron aralioides HOM05D000922 ORTHO05D008200 9.1e-28 126.7 92 69.6
Haze_07527 Corylus avellana HOM05D000922 ORTHO05D008200 1.6e-27 125.9 92 70.7
AL8G40030 Arabidopsis lyrata HOM05D000922 ORTHO05D008200 2.0e-27 125.6 92 70.7
Rhsim08G0173800 Rhododendron simsii HOM05D000922 ORTHO05D007418 2.7e-27 125.2 92 68.5
CARHR276810 Cardamine hirsuta HOM05D000922 ORTHO05D008200 3.5e-27 124.8 92 70.7
vmacro19401 Vaccinium macrocarpon HOM05D000922 ORTHO05D008200 3.5e-27 124.8 93 67.7
BraA06t25925Z Brassica rapa HOM05D000922 ORTHO05D008200 7.7e-27 123.6 92 69.6
Sp2g26130 Schrenkiella parvula HOM05D000922 ORTHO05D008200 7.7e-27 123.6 92 69.6
Aa31LG4G16810 Aethionema arabicum HOM05D002875 ORTHO05D003215 1.0e-26 123.2 92 67.4
EL10Ac9g21439 Beta vulgaris HOM05D000922 ORTHO05D008200 1.0e-26 123.2 87 69.0
BcaC01g02547 Brassica carinata HOM05D000922 ORTHO05D008200 1.0e-26 123.2 92 69.6
C03p63610 Brassica napus HOM05D000922 ORTHO05D008200 1.0e-26 123.2 92 69.6
BolC3t18619H Brassica oleracea HOM05D000922 ORTHO05D008200 1.0e-26 123.2 92 69.6
A06p29780 Brassica napus HOM05D000922 ORTHO05D008200 1.3e-26 122.9 92 69.6
Thhalv10004944m.g Eutrema salsugineum HOM05D000922 ORTHO05D008200 1.7e-26 122.5 92 69.6
Carub.0008s2371 Capsella rubella HOM05D000922 ORTHO05D008200 2.2e-26 122.1 92 67.4
Peaxi162Scf00089g01850 Petunia axillaris HOM05D000922 ORTHO05D008200 2.2e-26 122.1 92 68.5
Aqoxy3G02881 Aquilegia oxysepala HOM05D000922 ORTHO05D008200 2.9e-26 121.7 92 64.1
SalBow1G6106 Salvia bowleyana HOM05D000922 ORTHO05D008200 3.8e-26 121.3 91 65.9
SalBow5G5253 Salvia bowleyana HOM05D000922 ORTHO05D008200 3.8e-26 121.3 91 65.9
BcaB02g09714 Brassica carinata HOM05D000922 ORTHO05D008200 5.0e-26 120.9 92 68.5
AT5G63000 Arabidopsis thaliana HOM05D000922 ORTHO05D008200 6.5e-26 120.6 92 68.5
Cc04_g12150 Coffea canephora HOM05D000922 ORTHO05D008200 8.5e-26 120.2 93 65.6
Migut.O00114 Erythranthe guttata HOM05D000922 ORTHO05D008200 8.5e-26 120.2 83 71.1
Lsat_1_v5_gn_5_15061 Lactuca sativa HOM05D000922 ORTHO05D008200 1.1e-25 119.8 92 65.2
Ciclev10022297m.g Citrus clementina HOM05D000922 ORTHO05D008200 4.2e-25 117.9 91 67.0
HanXRQChr05g0155781 Helianthus annuus HOM05D000922 ORTHO05D008200 4.2e-25 117.9 90 64.4
ECA246G4361 Erigeron canadensis HOM05D000922 ORTHO05D008200 9.4e-25 116.7 92 63.0
PGR044G0925 Punica granatum HOM05D000922 ORTHO05D008200 9.4e-25 116.7 93 61.3
Zm00001eb332970 Zea mays HOM05D000922 ORTHO05D008200 6.1e-24 114.0 95 61.1
arahy.Tifrunner.gnm1.ann1.JAVP2G Arachis hypogaea HOM05D000922 ORTHO05D008200 1.0e-23 113.2 75 68.0
FAN08G1692 Fragaria x ananassa HOM05D000922 ORTHO05D008200 1.0e-23 113.2 113 55.8
ATR1091G108 Amborella trichopoda HOM05D000922 ORTHO05D008200 1.4e-23 112.8 91 62.6
SGA_v2.0_scaffold90G27896 Striga asiatica HOM05D000922 ORTHO05D008200 4.0e-23 111.3 79 68.4
MBI16_g39217_MAGBIO Magnolia biondii HOM05D000922 ORTHO05D008200 6.8e-23 110.5 115 54.8
unitig_0.g1435 Utricularia gibba HOM05D000922 ORTHO05D008200 3.4e-22 108.2 91 57.1
Os01g0271000 Oryza sativa ssp. japonica HOM05D000922 ORTHO05D008200 4.4e-22 107.8 94 59.6
PSO832G1073 Papaver somniferum HOM05D000922 ORTHO05D008200 6.3e-21 104.0 92 57.6
CDE07G1875 Ceratophyllum demersum HOM05D000922 ORTHO05D008200 3.1e-20 101.7 62 77.4
Dinv38572 Davidia involucrata HOM05D000922 ORTHO05D008200 1.6e-19 99.4 69 66.7
SHI38067 Sapria himalayana HOM05D000922 ORTHO05D008200 1.3e-18 96.3 89 56.2
SEGI_40590 Sequoiadendron giganteum HOM05D000922 ORTHO05D008200 1.7e-18 95.9 94 54.3
arahy.Tifrunner.gnm1.ann1.Q2CJ89 Arachis hypogaea HOM05D000922 ORTHO05D008200 1.4e-15 86.3 92 52.2
Sc04g0001730 Simmondsia chinensis HOM05D000922 ORTHO05D008200 1.8e-15 85.9 48 81.2
Oeu023435.1 Olea europaea HOM05D000922 ORTHO05D008200 8.8e-15 83.6 47 78.7
Mapoly0191s0008 Marchantia polymorpha HOM05D000922 ORTHO05D008200 4.1e-12 74.7 95 43.2
Cpa.g.sc76.32 Carica papaya HOM05D000922 ORTHO05D008200 5.4e-12 74.3 60 65.0
Glyma.05G038900 Glycine max HOM05D000922 ORTHO05D008200 1.7e-10 69.3 36 91.7
Peaxi162Scf00089g01839 Petunia axillaris HOM05D000922 ORTHO05D008200 1.4e-07 59.7 56 50.0
CBR_g38960 Chara braunii HOM05D000922 ORTHO05D008200 4.0e-07 58.2 103 35.0
AagrBONN_evm.TU.Sc2ySwM_228.4800 Anthoceros agrestis HOM05D000922 ORTHO05D008200 2.0e-06 55.8 85 36.5
Medtr4g105580 Medicago truncatula HOM05D000922 ORTHO05D008200 3.4e-06 55.1 84 38.1
SMO111G0048 Selaginella moellendorffii HOM05D000922 ORTHO05D008200 9.8e-06 53.5 48 52.1


User provided reference genes

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