Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G11017 Trifolium pratense HOM05D008092 ORTHO05D010277 2.0e-32 141.7 66 100.0
TPR.G14075 Trifolium pratense HOM05D008092 ORTHO05D010277 1.1e-27 125.9 66 90.9
Psat1g056120 Pisum sativum HOM05D008092 ORTHO05D010277 9.1e-22 106.3 70 74.3
Lalb_Chr02g0156941 Lupinus albus HOM05D008092 ORTHO05D010277 1.5e-16 89.0 65 63.1
Glyma.05G005000 Glycine max HOM05D008092 ORTHO05D010277 1.4e-14 82.4 55 69.1
VMungo0464G1885 Vigna mungo HOM05D008092 ORTHO05D010277 1.4e-14 82.4 55 69.1
Phvul.004G010900 Phaseolus vulgaris HOM05D008092 ORTHO05D010277 1.8e-14 82.0 55 70.9
Glyma.19G005600 Glycine max HOM05D008092 ORTHO05D010277 3.1e-14 81.3 55 69.1
arahy.Tifrunner.gnm1.ann1.KZ8L38 Arachis hypogaea HOM05D008092 ORTHO05D010277 4.1e-14 80.9 53 69.8
arahy.Tifrunner.gnm1.ann1.M07V8F Arachis hypogaea HOM05D008092 ORTHO05D010277 4.1e-14 80.9 53 69.8
Lj2g0022146 Lotus japonicus HOM05D008092 ORTHO05D010277 7.0e-14 80.1 66 63.6
Medtr6g005430 Medicago truncatula HOM05D008092 ORTHO05D010277 2.7e-13 78.2 40 87.5
CiPaw.03G041800 Carya illinoinensis HOM05D008092 ORTHO05D010277 9.5e-11 69.7 51 62.7
CANSAT64G0606 Cannabis sativa HOM05D008092 ORTHO05D010277 1.6e-10 68.9 41 73.2
Prupe.3G289300 Prunus persica HOM05D008092 ORTHO05D010277 2.8e-10 68.2 44 65.9
CiPaw.02G035400 Carya illinoinensis HOM05D008092 ORTHO05D010277 3.6e-10 67.8 40 70.0
Manes.17G115000 Manihot esculenta HOM05D008092 ORTHO05D010277 8.0e-10 66.6 40 67.5
Atru.chr6.2355 Acer truncatum HOM05D008092 ORTHO05D010277 1.8e-09 65.5 41 68.3
CiPaw.04G027500 Carya illinoinensis HOM05D008092 ORTHO05D010277 1.8e-09 65.5 40 67.5
Dinv33463 Davidia involucrata HOM05D008092 ORTHO05D010277 1.8e-09 65.5 54 53.7
Duzib187G1326 Durio zibethinus HOM05D008092 ORTHO05D010277 1.8e-09 65.5 41 65.9
vmacro05852 Vaccinium macrocarpon HOM05D008092 ORTHO05D010277 1.8e-09 65.5 50 58.0
CSS0000484 Camellia sinensis var. sinensis HOM05D008092 ORTHO05D010277 2.3e-09 65.1 45 60.0
CSS0015151 Camellia sinensis var. sinensis HOM05D008092 ORTHO05D010277 2.3e-09 65.1 45 60.0
COL.COLO4_29084 Corchorus olitorius HOM05D008092 ORTHO05D010277 2.3e-09 65.1 41 65.9
QL02p075225 Quercus lobata HOM05D008092 ORTHO05D010277 2.3e-09 65.1 41 65.9
QL93p1842_0091 Quercus lobata HOM05D008092 ORTHO05D010277 2.3e-09 65.1 41 65.9
TAR374G1215 Trochodendron aralioides HOM05D008092 ORTHO05D010277 2.3e-09 65.1 41 65.9
TWI36G1451 Tripterygium wilfordii HOM05D008092 ORTHO05D010277 6.8e-09 63.5 40 65.0
GSVIVG01032429001 Vitis vinifera HOM05D008092 ORTHO05D010277 6.8e-09 63.5 44 61.4
Gohir.D10G086900 Gossypium hirsutum HOM05D008092 ORTHO05D010277 8.9e-09 63.2 41 63.4
Gorai.011G095100 Gossypium raimondii HOM05D008092 ORTHO05D010277 8.9e-09 63.2 41 63.4
MD17G1030500 Malus domestica HOM05D008092 ORTHO05D010277 8.9e-09 63.2 43 60.5
PGR083G2137 Punica granatum HOM05D008092 ORTHO05D010277 8.9e-09 63.2 39 69.2
MBI10_g33304_MAGBIO Magnolia biondii HOM05D008092 ORTHO05D010277 2.0e-08 62.0 41 63.4
MBI10_g44380_MAGBIO Magnolia biondii HOM05D008092 ORTHO05D010277 2.0e-08 62.0 41 63.4
Thecc.04G015000 Theobroma cacao HOM05D008092 ORTHO05D010277 2.0e-08 62.0 41 61.0
Cfa007393 Carpinus fangiana HOM05D008092 ORTHO05D010277 2.6e-08 61.6 41 61.0
Gohir.A10G102700 Gossypium hirsutum HOM05D008092 ORTHO05D010277 2.6e-08 61.6 41 61.0
Nn3g16773 Nelumbo nucifera HOM05D008092 ORTHO05D010277 2.6e-08 61.6 41 61.0
Actinidia06006 Actinidia chinensis HOM05D008092 ORTHO05D010277 4.4e-08 60.8 40 57.5
Nitab4.5_0000118g0190 Nicotiana tabacum HOM05D008092 ORTHO05D010277 5.8e-08 60.5 48 56.2
CDE02G4384 Ceratophyllum demersum HOM05D008092 ORTHO05D010277 9.8e-08 59.7 39 64.1
Rhsim10G0018500 Rhododendron simsii HOM05D008092 ORTHO05D010277 1.3e-07 59.3 40 55.0
Cc00_g25440 Coffea canephora HOM05D008092 ORTHO05D010277 2.9e-07 58.2 43 55.8
Eucgr.I01759 Eucalyptus grandis HOM05D008092 ORTHO05D010277 3.7e-07 57.8 44 61.4
DCAR_021714 Daucus carota HOM05D008092 ORTHO05D010277 6.4e-07 57.0 50 52.0
Sc03g0007590 Simmondsia chinensis HOM05D008092 ORTHO05D010277 1.4e-06 55.8 42 52.4
PSO017G5173 Papaver somniferum HOM05D008092 ORTHO05D010277 1.9e-06 55.5 41 56.1
PSO478G3237 Papaver somniferum HOM05D008092 ORTHO05D010277 1.9e-06 55.5 41 56.1
Cpa.g.sc108.51 Carica papaya HOM05D008092 ORTHO05D010277 3.2e-06 54.7 32 71.9
HanXRQChr09g0255051 Helianthus annuus HOM05D008092 ORTHO05D010277 3.2e-06 54.7 37 54.1
Lsat_1_v5_gn_4_183520 Lactuca sativa HOM05D008092 ORTHO05D010277 3.2e-06 54.7 37 56.8
Eucgr.I01763 Eucalyptus grandis HOM05D008092 ORTHO05D010277 9.2e-06 53.1 37 62.2


User provided reference genes

Program Settings