Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G11001 Trifolium pratense HOM05D008198 ORTHO05D010220 8.1e-48 193.4 94 100.0
Medtr4g094640 Medicago truncatula HOM05D008198 ORTHO05D010220 1.1e-36 156.4 78 96.2
Ca_18253_v3 Cicer arietinum L. HOM05D008198 ORTHO05D010220 7.4e-33 143.7 80 87.5
Psat7g089000 Pisum sativum HOM05D008198 ORTHO05D010220 1.5e-30 136.0 79 87.3
VMungo0251G3138 Vigna mungo HOM05D008198 ORTHO05D010220 5.6e-25 117.5 82 74.4
Glyma.05G131701 Glycine max HOM05D008198 ORTHO05D010220 7.4e-25 117.1 80 72.5
Phvul.002G191200 Phaseolus vulgaris HOM05D008198 ORTHO05D010220 8.2e-24 113.6 84 70.2
Lj4g0024937 Lotus japonicus HOM05D008198 ORTHO05D010220 1.1e-23 113.2 85 74.1
Lalb_Chr07g0188441 Lupinus albus HOM05D008198 ORTHO05D010220 2.4e-23 112.1 85 75.3
Glyma.08G086200 Glycine max HOM05D008198 ORTHO05D010220 5.3e-23 110.9 80 72.5
Cfa000688 Carpinus fangiana HOM05D008198 ORTHO05D010220 7.6e-22 107.1 83 66.3
Haze_06107 Corylus avellana HOM05D008198 ORTHO05D010220 1.8e-18 95.9 85 63.5
Potri.001G123300 Populus trichocarpa HOM05D008198 ORTHO05D010220 2.3e-18 95.5 87 59.8
RcHm_v2.0_Chr5g0020591 Rosa chinensis HOM05D008198 ORTHO05D010220 5.1e-18 94.4 87 56.3
MD05G1249200 Malus domestica HOM05D008198 ORTHO05D010220 6.7e-18 94.0 74 63.5
Lalb_Chr04g0257791 Lupinus albus HOM05D008198 ORTHO05D010220 1.1e-17 93.2 69 72.5
QL11p013556 Quercus lobata HOM05D008198 ORTHO05D010220 1.5e-17 92.8 85 62.4
Prupe.4G115000 Prunus persica HOM05D008198 ORTHO05D010220 1.9e-17 92.4 71 67.6
Sabra01G0095000 Salix brachista HOM05D008198 ORTHO05D010220 3.3e-17 91.7 84 57.1
CiPaw.09G074800 Carya illinoinensis HOM05D008198 ORTHO05D010220 4.3e-17 91.3 83 57.8
FAN21G2662 Fragaria x ananassa HOM05D008198 ORTHO05D010220 5.7e-17 90.9 86 57.0
MD10G1229700 Malus domestica HOM05D008198 ORTHO05D010220 9.7e-17 90.1 75 64.0
Manes.03G073400 Manihot esculenta HOM05D008198 ORTHO05D010220 9.7e-17 90.1 93 52.7
Atru.chr10.441 Acer truncatum HOM05D008198 ORTHO05D010220 2.2e-16 89.0 73 64.4
ClCG01G025660 Citrullus lanatus HOM05D008198 ORTHO05D010220 2.2e-16 89.0 82 59.8
FvH4_3g12620 Fragaria vesca HOM05D008198 ORTHO05D010220 6.3e-16 87.4 76 61.8
FAN25G2935 Fragaria x ananassa HOM05D008198 ORTHO05D010220 6.3e-16 87.4 76 61.8
Oeu058939.1 Olea europaea HOM05D008198 ORTHO05D010220 6.3e-16 87.4 84 57.1
Sabra03G0076400 Salix brachista HOM05D008198 ORTHO05D010220 8.2e-16 87.0 83 54.2
Gohir.A03G217600 Gossypium hirsutum HOM05D008198 ORTHO05D010220 1.4e-15 86.3 74 58.1
Duzib248G0575 Durio zibethinus HOM05D008198 ORTHO05D010220 1.8e-15 85.9 84 52.4
Gohir.D02G239700 Gossypium hirsutum HOM05D008198 ORTHO05D010220 1.8e-15 85.9 72 58.3
Gorai.005G268000 Gossypium raimondii HOM05D008198 ORTHO05D010220 1.8e-15 85.9 72 58.3
Thecc.02G006400 Theobroma cacao HOM05D008198 ORTHO05D010220 4.1e-15 84.7 81 55.6
CiPaw.10G063000 Carya illinoinensis HOM05D008198 ORTHO05D010220 5.3e-15 84.3 98 54.1
Ciclev10017172m.g Citrus clementina HOM05D008198 ORTHO05D010220 2.0e-14 82.4 76 60.5
Nn7g38206 Nelumbo nucifera HOM05D008198 ORTHO05D010220 2.0e-14 82.4 93 54.8
Sopen02g017700 Solanum pennellii HOM05D008198 ORTHO05D010220 7.7e-14 80.5 78 53.8
Sed0017835 Sechium edule HOM05D008198 ORTHO05D010220 1.3e-13 79.7 84 53.6
CARHR226750 Cardamine hirsuta HOM05D008198 ORTHO05D010220 3.8e-13 78.2 94 53.2
Potri.003G110200 Populus trichocarpa HOM05D008198 ORTHO05D010220 3.8e-13 78.2 87 57.5
CSS0019680 Camellia sinensis var. sinensis HOM05D008198 ORTHO05D010220 2.5e-12 75.5 74 56.8
PGSC0003DMG400010446 Solanum tuberosum HOM05D008198 ORTHO05D010220 5.5e-12 74.3 85 50.6
Dinv09067 Davidia involucrata HOM05D008198 ORTHO05D010220 9.4e-12 73.6 66 63.6
Carub.0007s2117 Capsella rubella HOM05D008198 ORTHO05D010220 1.2e-11 73.2 76 50.0
COL.COLO4_17639 Corchorus olitorius HOM05D008198 ORTHO05D010220 1.2e-11 73.2 75 54.7
SalBow8G3784 Salvia bowleyana HOM05D008198 ORTHO05D010220 1.2e-11 73.2 72 55.6
TWI38G1073 Tripterygium wilfordii HOM05D008198 ORTHO05D010220 1.2e-11 73.2 86 53.5
AL7G33930 Arabidopsis lyrata HOM05D008198 ORTHO05D010220 1.6e-11 72.8 89 55.1
Migut.M01995 Erythranthe guttata HOM05D008198 ORTHO05D010220 1.6e-11 72.8 76 56.6
BcaNung01739 Brassica carinata HOM05D008198 ORTHO05D010220 4.6e-11 71.2 83 47.0
Sp7g18430 Schrenkiella parvula HOM05D008198 ORTHO05D010220 4.6e-11 71.2 88 48.9
A01p11780 Brassica napus HOM05D008198 ORTHO05D010220 7.9e-11 70.5 84 47.6
BraA01t01120Z Brassica rapa HOM05D008198 ORTHO05D010220 7.9e-11 70.5 84 47.6
BcaC09g51355 Brassica carinata HOM05D008198 ORTHO05D010220 1.8e-10 69.3 84 48.8
Thhalv10026564m.g Eutrema salsugineum HOM05D008198 ORTHO05D010220 8.8e-10 67.0 73 49.3
AT4G19980 Arabidopsis thaliana HOM05D008198 ORTHO05D010220 1.1e-09 66.6 84 47.6
C01p13980 Brassica napus HOM05D008198 ORTHO05D010220 2.5e-09 65.5 84 46.4
BolC1t01365H Brassica oleracea HOM05D008198 ORTHO05D010220 2.5e-09 65.5 84 46.4
Eucgr.L01648 Eucalyptus grandis HOM05D008198 ORTHO05D010220 3.3e-09 65.1 68 60.3
C03p82100 Brassica napus HOM05D008198 ORTHO05D010220 1.3e-08 63.2 73 49.3
BolC3t20547H Brassica oleracea HOM05D008198 ORTHO05D010220 1.3e-08 63.2 73 49.3
SGA_v2.0_scaffold298G47697 Striga asiatica HOM05D008198 ORTHO05D010220 1.3e-08 63.2 68 51.5
Aa31LG6G2390 Aethionema arabicum HOM05D008198 ORTHO05D010220 3.7e-08 61.6 79 45.6
Actinidia22419 Actinidia chinensis HOM05D008198 ORTHO05D010220 1.2e-06 56.6 61 52.5


User provided reference genes

Program Settings