Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G110 Trifolium pratense HOM05D000647 ORTHO05D033977 2.2e-37 158.3 72 100.0
TPR.G15140 Trifolium pratense HOM05D000647 ORTHO05D000485 2.4e-36 154.8 72 95.8
Psat4g196880 Pisum sativum HOM05D000647 ORTHO05D000485 7.9e-27 123.2 72 75.0
Medtr8g014640 Medicago truncatula HOM05D000647 ORTHO05D000485 3.0e-26 121.3 71 73.2
Medtr8g466410 Medicago truncatula HOM05D000647 ORTHO05D000485 2.5e-25 118.2 73 75.3
Medtr8g014650 Medicago truncatula HOM05D000647 ORTHO05D000485 1.1e-23 112.8 72 73.6
Lj3g0002011 Lotus japonicus HOM05D000647 ORTHO05D000485 3.1e-23 111.3 72 68.1
TPR.G15144 Trifolium pratense HOM05D000647 ORTHO05D000485 1.2e-22 109.4 70 74.3
Lj3g0025679 Lotus japonicus HOM05D000647 ORTHO05D000485 2.6e-22 108.2 72 65.3
Psat4g196960 Pisum sativum HOM05D000647 ORTHO05D000485 7.1e-20 100.1 57 78.9
Glyma.08G200200 Glycine max HOM05D000647 ORTHO05D000485 1.2e-19 99.4 72 63.9
VMungo0331G0935 Vigna mungo HOM05D000647 ORTHO05D000485 3.9e-18 94.4 74 58.1
Phvul.010G144600 Phaseolus vulgaris HOM05D000647 ORTHO05D000485 6.7e-18 93.6 66 62.1
Lalb_Chr25g0280201 Lupinus albus HOM05D000647 ORTHO05D000485 2.5e-17 91.7 69 60.9
arahy.Tifrunner.gnm1.ann1.KJ9H1S Arachis hypogaea HOM05D000647 ORTHO05D000485 5.7e-17 90.5 68 58.8
arahy.Tifrunner.gnm1.ann1.END433 Arachis hypogaea HOM05D000647 ORTHO05D000485 1.3e-16 89.4 68 57.4
Glyma.07G014600 Glycine max HOM05D000647 ORTHO05D000485 1.3e-16 89.4 74 54.1
Medtr8g466370 Medicago truncatula HOM05D000647 ORTHO05D000485 4.5e-14 80.9 53 73.6
Glyma.08G200000 Glycine max HOM05D000647 ORTHO05D000485 1.9e-12 75.5 45 66.7
Phvul.010G144200 Phaseolus vulgaris HOM05D000647 ORTHO05D000485 9.4e-12 73.2 45 64.4
Dinv30425 Davidia involucrata HOM05D000647 ORTHO05D000485 4.6e-11 70.9 68 51.5
VMungo0331G0317 Vigna mungo HOM05D000647 ORTHO05D000485 6.1e-11 70.5 67 49.3
CiPaw.01G230300 Carya illinoinensis HOM05D000647 ORTHO05D000485 1.4e-10 69.3 71 47.9
Hma1.2p1_0430F.1_g151260 Hydrangea macrophylla HOM05D000647 ORTHO05D000485 1.4e-10 69.3 61 50.8
Prupe.3G057100 Prunus persica HOM05D000647 ORTHO05D000485 3.0e-10 68.2 69 49.3
RcHm_v2.0_Chr2g0140961 Rosa chinensis HOM05D000647 ORTHO05D000485 3.9e-10 67.8 70 48.6
RcHm_v2.0_Chr2g0141021 Rosa chinensis HOM05D000647 ORTHO05D000485 3.9e-10 67.8 66 50.0
RcHm_v2.0_Chr2g0140991 Rosa chinensis HOM05D000647 ORTHO05D000485 5.1e-10 67.4 67 47.8
Sopen03g039930 Solanum pennellii HOM05D000647 ORTHO05D000485 5.1e-10 67.4 73 41.1
GSVIVG01016957001 Vitis vinifera HOM05D000647 ORTHO05D000485 8.8e-10 66.6 44 61.4
Eucgr.J02927 Eucalyptus grandis HOM05D000647 ORTHO05D000485 1.5e-09 65.9 70 48.6
TAR624G1205 Trochodendron aralioides HOM05D000647 ORTHO05D000485 1.5e-09 65.9 67 46.3
Cfa003636 Carpinus fangiana HOM05D000647 ORTHO05D000485 2.0e-09 65.5 68 47.1
Haze_15861 Corylus avellana HOM05D000647 ORTHO05D000485 2.0e-09 65.5 68 47.1
FvH4_6g32570 Fragaria vesca HOM05D000647 ORTHO05D000485 2.0e-09 65.5 70 48.6
Eucgr.J02693 Eucalyptus grandis HOM05D000647 ORTHO05D000485 2.5e-09 65.1 70 47.1
TWI75G0668 Tripterygium wilfordii HOM05D000647 ORTHO05D000485 2.5e-09 65.1 49 57.1
FAN02G4266 Fragaria x ananassa HOM05D000647 ORTHO05D000485 3.3e-09 64.7 70 45.7
CSS0030342 Camellia sinensis var. sinensis HOM05D000647 ORTHO05D000485 4.3e-09 64.3 70 45.7
CAN.G635.42 Capsicum annuum HOM05D000647 ORTHO05D000485 4.3e-09 64.3 68 41.2
CiPaw.01G230200 Carya illinoinensis HOM05D000647 ORTHO05D000485 4.3e-09 64.3 72 47.2
Duzib251G0197 Durio zibethinus HOM05D000647 ORTHO05D000485 5.7e-09 63.9 71 46.5
Glyma.07G014500 Glycine max HOM05D000647 ORTHO05D000485 5.7e-09 63.9 74 47.3
Potri.001G191000 Populus trichocarpa HOM05D000647 ORTHO05D000485 5.7e-09 63.9 68 45.6
CSS0032840 Camellia sinensis var. sinensis HOM05D000647 ORTHO05D000485 7.4e-09 63.5 68 47.1
MBI04_g07000_MAGBIO Magnolia biondii HOM05D001290 ORTHO05D000485 7.4e-09 63.5 72 45.8
VMungo0331G0217 Vigna mungo HOM05D000647 ORTHO05D000485 7.4e-09 63.5 70 42.9
FAN09G3664 Fragaria x ananassa HOM05D000647 ORTHO05D000485 9.7e-09 63.2 70 45.7
Sabra01G0150600 Salix brachista HOM05D000647 ORTHO05D000485 9.7e-09 63.2 42 64.3
Rhsim08G0228500 Rhododendron simsii HOM05D000647 ORTHO05D000485 1.3e-08 62.8 71 45.1
FAN09G3927 Fragaria x ananassa HOM05D000647 ORTHO05D000485 1.7e-08 62.4 67 40.3
RcHm_v2.0_Chr2g0140951 Rosa chinensis HOM05D000647 ORTHO05D000485 1.7e-08 62.4 66 45.5
CAN.G1143.20 Capsicum annuum HOM05D000647 ORTHO05D000485 2.8e-08 61.6 73 41.1
FvH4_6g32551 Fragaria vesca HOM05D000647 ORTHO05D000485 2.8e-08 61.6 70 44.3
Peaxi162Scf00207g01227 Petunia axillaris HOM05D000647 ORTHO05D000485 2.8e-08 61.6 78 41.0
Nitab4.5_0001991g0040 Nicotiana tabacum HOM05D000647 ORTHO05D000485 3.7e-08 61.2 68 39.7
CSS0022202 Camellia sinensis var. sinensis HOM05D000647 ORTHO05D000485 4.8e-08 60.8 69 43.5
FAN05G0021 Fragaria x ananassa HOM05D000647 ORTHO05D000485 4.8e-08 60.8 36 63.9
TAR624G0545 Trochodendron aralioides HOM05D000647 ORTHO05D000485 4.8e-08 60.8 67 43.3
CAN.G635.40 Capsicum annuum HOM05D000647 ORTHO05D033977 6.3e-08 60.5 68 39.7
COL.COLO4_30532 Corchorus olitorius HOM05D000647 ORTHO05D000485 6.3e-08 60.5 73 43.8
MD09G1200500 Malus domestica HOM05D000647 ORTHO05D000485 6.3e-08 60.5 71 43.7
PSO210G0616 Papaver somniferum HOM05D000647 ORTHO05D000485 6.3e-08 60.5 58 44.8
Solyc03g121100.4 Solanum lycopersicum HOM05D000647 ORTHO05D000485 6.3e-08 60.5 72 38.9
FvH4_6g32560 Fragaria vesca HOM05D000647 ORTHO05D000485 8.2e-08 60.1 40 57.5
FAN02G3175 Fragaria x ananassa HOM05D000647 ORTHO05D000485 8.2e-08 60.1 40 57.5
Nn7g37586 Nelumbo nucifera HOM05D000647 ORTHO05D000485 8.2e-08 60.1 69 43.5
Thecc.02G309200 Theobroma cacao HOM05D000647 ORTHO05D000485 8.2e-08 60.1 72 41.7
Nitab4.5_0001991g0060 Nicotiana tabacum HOM05D000647 ORTHO05D000485 1.1e-07 59.7 69 36.2
PGSC0003DMG400002523 Solanum tuberosum HOM05D000647 ORTHO05D000485 1.1e-07 59.7 75 38.7
Sopen06g021870 Solanum pennellii HOM05D000647 ORTHO05D000485 1.4e-07 59.3 73 38.4
Duzib160G0421 Durio zibethinus HOM05D000647 ORTHO05D000485 1.8e-07 58.9 72 40.3
Gorai.013G029100 Gossypium raimondii HOM05D000647 ORTHO05D000485 1.8e-07 58.9 72 44.4
Thecc.06G101900 Theobroma cacao HOM05D000647 ORTHO05D000485 1.8e-07 58.9 68 42.6
Gohir.A13G027100 Gossypium hirsutum HOM05D000647 ORTHO05D000485 3.1e-07 58.2 59 45.8
Gohir.D13G025900 Gossypium hirsutum HOM05D000647 ORTHO05D000485 3.1e-07 58.2 72 44.4
Nitab4.5_0006022g0020 Nicotiana tabacum HOM05D000647 ORTHO05D000485 3.1e-07 58.2 66 37.9
PSO210G1307 Papaver somniferum HOM05D000647 ORTHO05D000485 3.1e-07 58.2 49 51.0
Peaxi162Scf00038g01132 Petunia axillaris HOM05D000647 ORTHO05D000485 3.1e-07 58.2 72 37.5
VMungo0331G0762 Vigna mungo HOM05D000647 ORTHO05D000485 3.1e-07 58.2 71 45.1
CSS0048668 Camellia sinensis var. sinensis HOM05D000647 ORTHO05D000485 4.1e-07 57.8 72 41.7
MD09G1200900 Malus domestica HOM05D000647 ORTHO05D000485 4.1e-07 57.8 71 42.3
MD09G1201200 Malus domestica HOM05D000647 ORTHO05D000485 4.1e-07 57.8 71 42.3
PSO210G1480 Papaver somniferum HOM05D000647 ORTHO05D000485 4.1e-07 57.8 58 46.6
COL.COLO4_27632 Corchorus olitorius HOM05D000647 ORTHO05D000485 5.3e-07 57.4 40 55.0
Nitab4.5_0000300g0180 Nicotiana tabacum HOM05D000647 ORTHO05D000485 5.3e-07 57.4 68 39.7
PSO210G2115 Papaver somniferum HOM05D000647 ORTHO05D000485 5.3e-07 57.4 58 44.8
Phvul.010G144300 Phaseolus vulgaris HOM05D000647 ORTHO05D000485 5.3e-07 57.4 71 45.1
CSS0016270 Camellia sinensis var. sinensis HOM05D000647 ORTHO05D000485 9.1e-07 56.6 69 40.6
Nitab4.5_0004969g0070 Nicotiana tabacum HOM05D000647 ORTHO05D000485 1.2e-06 56.2 42 47.6
Prupe.3G057000 Prunus persica HOM05D000647 ORTHO05D000485 1.2e-06 56.2 69 42.0
Glyma.08G200100 Glycine max HOM05D000647 ORTHO05D000485 1.5e-06 55.8 47 57.4
Manes.11G032000 Manihot esculenta HOM05D000647 ORTHO05D000485 1.5e-06 55.8 69 42.0
Cfa003635 Carpinus fangiana HOM05D000647 ORTHO05D000485 2.0e-06 55.5 65 43.1
MBI04_g06999_MAGBIO Magnolia biondii HOM05D000647 ORTHO05D000485 2.0e-06 55.5 71 43.7
Sc13g0006570 Simmondsia chinensis HOM05D000647 ORTHO05D000485 2.0e-06 55.5 68 45.6
CANSAT56G3029 Cannabis sativa HOM05D000647 ORTHO05D000485 2.6e-06 55.1 74 41.9
Haze_15862 Corylus avellana HOM05D000647 ORTHO05D000485 2.6e-06 55.1 65 44.6
Dinv37965 Davidia involucrata HOM05D000647 ORTHO05D000485 2.6e-06 55.1 72 38.9
Solyc06g062390.3 Solanum lycopersicum HOM05D000647 ORTHO05D000485 2.6e-06 55.1 73 35.6
CANSAT56G1136 Cannabis sativa HOM05D000647 ORTHO05D000485 3.4e-06 54.7 41 51.2
vmacro18844 Vaccinium macrocarpon HOM05D000647 ORTHO05D000485 3.4e-06 54.7 71 40.8
PGSC0003DMG401016495 Solanum tuberosum HOM05D000647 ORTHO05D000485 5.9e-06 53.9 74 39.2
Sopen06g021860 Solanum pennellii HOM05D000647 ORTHO05D000485 7.7e-06 53.5 73 35.6


User provided reference genes

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