Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G10961 Trifolium pratense HOM05D000402 ORTHO05D410658 1.1e-19 99.0 51 100.0
TPR.G4451 Trifolium pratense HOM05D000402 ORTHO05D000263 1.1e-11 72.4 45 84.4
TPR.G36340 Trifolium pratense HOM05D000402 ORTHO05D000263 2.5e-11 71.2 45 84.4
Medtr8g031610 Medicago truncatula HOM05D000402 ORTHO05D000263 1.4e-09 65.5 38 86.8
Medtr8g031600 Medicago truncatula HOM05D000402 ORTHO05D000263 2.4e-09 64.7 38 84.2
Medtr8g031630 Medicago truncatula HOM05D000402 ORTHO05D000263 9.0e-09 62.8 38 81.6
Medtr8g031650 Medicago truncatula HOM05D000402 ORTHO05D000263 9.0e-09 62.8 38 81.6
TPR.G4370 Trifolium pratense HOM05D000402 ORTHO05D000263 2.0e-08 61.6 33 87.9
Medtr5g062280 Medicago truncatula HOM05D000402 ORTHO05D000263 1.7e-07 58.5 33 84.8
Potri.002G157000 Populus trichocarpa HOM05D000402 ORTHO05D000263 6.4e-07 56.6 40 65.0
Glyma.07G073900 Glycine max HOM05D000402 ORTHO05D000263 8.4e-07 56.2 37 75.7
Psat4g153960 Pisum sativum HOM05D000402 ORTHO05D000263 1.9e-06 55.1 38 68.4
Prupe.2G160800 Prunus persica HOM05D000402 ORTHO05D000263 1.9e-06 55.1 39 66.7
Prupe.2G161100 Prunus persica HOM05D000402 ORTHO05D000263 1.9e-06 55.1 39 66.7
Prupe.4G240700 Prunus persica HOM05D000402 ORTHO05D000263 2.4e-06 54.7 40 65.0
CiPaw.01G056600 Carya illinoinensis HOM05D000402 ORTHO05D000263 4.2e-06 53.9 38 76.3
Haze_15452 Corylus avellana HOM05D000402 ORTHO05D000263 4.2e-06 53.9 39 74.4
QL12p033713 Quercus lobata HOM05D000402 ORTHO05D000263 4.2e-06 53.9 34 79.4
Ca_03739_v3 Cicer arietinum L. HOM05D000402 ORTHO05D000263 5.4e-06 53.5 33 78.8
FvH4_7g13601 Fragaria vesca HOM05D000402 ORTHO05D000263 5.4e-06 53.5 40 65.0
FAN06G1931 Fragaria x ananassa HOM05D000602 ORTHO05D002573 5.4e-06 53.5 40 65.0
Lj3g0010474 Lotus japonicus HOM05D000402 ORTHO05D000263 5.4e-06 53.5 38 71.1
Phvul.010G095500 Phaseolus vulgaris HOM05D000402 ORTHO05D000263 5.4e-06 53.5 38 71.1
Sabra02G0124600 Salix brachista HOM05D000402 ORTHO05D000263 5.4e-06 53.5 40 60.0
VMungo0331G0555 Vigna mungo HOM05D000402 ORTHO05D000263 5.4e-06 53.5 38 71.1
CiPaw.01G056900 Carya illinoinensis HOM05D000402 ORTHO05D000263 7.1e-06 53.1 38 76.3
Cpa.g.sc18.202 Carica papaya HOM05D000402 ORTHO05D000263 9.3e-06 52.8 38 65.8
CiPaw.01G056800 Carya illinoinensis HOM05D000402 ORTHO05D000263 9.3e-06 52.8 47 57.4
Lj9A579T33 Lonicera japonica HOM05D000402 ORTHO05D000263 9.3e-06 52.8 37 73.0
Psat2g074280 Pisum sativum HOM05D000402 ORTHO05D000263 9.3e-06 52.8 33 81.8
Prupe.2G161300 Prunus persica HOM05D000402 ORTHO05D000263 9.3e-06 52.8 40 60.0
Prupe.2G161900 Prunus persica HOM05D000402 ORTHO05D000263 9.3e-06 52.8 40 62.5
Thecc.01G364100 Theobroma cacao HOM05D000402 ORTHO05D000263 9.3e-06 52.8 38 65.8


User provided reference genes

Program Settings