Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G10907 Trifolium pratense HOM05D000286 ORTHO05D000170 2.0e-18 94.7 47 100.0
TPR.G15172 Trifolium pratense HOM05D000286 ORTHO05D000170 7.4e-18 92.8 47 97.9
arahy.Tifrunner.gnm1.ann1.NI1FRU Arachis hypogaea HOM05D000286 ORTHO05D000170 1.3e-17 92.0 47 95.7
arahy.Tifrunner.gnm1.ann1.R0L7V6 Arachis hypogaea HOM05D000286 ORTHO05D000170 1.3e-17 92.0 47 95.7
Lalb_Chr24g0397811 Lupinus albus HOM05D000286 ORTHO05D000170 2.8e-17 90.9 47 93.6
Medtr6g084420 Medicago truncatula HOM05D000286 ORTHO05D000170 2.8e-17 90.9 47 95.7
Psat1g037320 Pisum sativum HOM05D000286 ORTHO05D000170 6.3e-17 89.7 47 89.4
VMungo0464G0946 Vigna mungo HOM05D000286 ORTHO05D000170 1.1e-16 89.0 47 91.5
Glyma.09G184000 Glycine max HOM05D000286 ORTHO05D000170 1.4e-16 88.6 47 91.5
Phvul.004G156600 Phaseolus vulgaris HOM05D000286 ORTHO05D000170 3.1e-16 87.4 47 91.5
Lj2g0019092 Lotus japonicus HOM05D000286 ORTHO05D000170 5.3e-16 86.7 47 87.2
Glyma.07G092100 Glycine max HOM05D000286 ORTHO05D000170 1.6e-15 85.1 46 89.1
Nn3g17859 Nelumbo nucifera HOM05D000286 ORTHO05D000170 2.2e-09 64.7 46 71.7
Dinv33945 Davidia involucrata HOM05D000286 ORTHO05D000170 4.1e-08 60.5 46 67.4
COL.COLO4_09327 Corchorus olitorius HOM05D000286 ORTHO05D000170 5.4e-08 60.1 46 65.2
TAR629G2246 Trochodendron aralioides HOM05D000286 ORTHO05D000170 7.0e-08 59.7 46 65.2
TAR629G2561 Trochodendron aralioides HOM05D000286 ORTHO05D000170 7.0e-08 59.7 46 65.2
Atru.chr1.1700 Acer truncatum HOM05D000286 ORTHO05D000170 1.6e-07 58.5 46 65.2
Gohir.A12G054000 Gossypium hirsutum HOM05D000286 ORTHO05D000170 1.6e-07 58.5 46 60.9
Gohir.D12G052600 Gossypium hirsutum HOM05D000286 ORTHO05D000170 1.6e-07 58.5 46 60.9
Gorai.008G055800 Gossypium raimondii HOM05D000286 ORTHO05D000170 1.6e-07 58.5 46 60.9
Lj4A191G50 Lonicera japonica HOM05D000286 ORTHO05D000170 3.5e-07 57.4 46 63.0
Thecc.04G134000 Theobroma cacao HOM05D000286 ORTHO05D000170 3.5e-07 57.4 46 63.0
Oeu036859.2 Olea europaea HOM05D000286 ORTHO05D000170 4.5e-07 57.0 45 64.4
Peaxi162Scf00501g00317 Petunia axillaris HOM05D000286 ORTHO05D000170 4.5e-07 57.0 45 62.2
Duzib133G0868 Durio zibethinus HOM05D000286 ORTHO05D000170 5.9e-07 56.6 46 60.9
MD09G1252900 Malus domestica HOM05D000286 ORTHO05D000170 7.7e-07 56.2 46 60.9
TAR371G0426 Trochodendron aralioides HOM05D000286 ORTHO05D000170 7.7e-07 56.2 46 63.0
Migut.H00216 Erythranthe guttata HOM05D000286 ORTHO05D000170 1.7e-06 55.1 45 62.2
PSO017G1987 Papaver somniferum HOM05D000286 ORTHO05D000170 1.7e-06 55.1 46 63.0
SalBow5G5259 Salvia bowleyana HOM05D000286 ORTHO05D000170 2.2e-06 54.7 45 62.2
Solyc02g063160.4 Solanum lycopersicum HOM05D000286 ORTHO05D000170 2.2e-06 54.7 45 57.8
Sopen02g014230 Solanum pennellii HOM05D000286 ORTHO05D000170 2.2e-06 54.7 45 57.8
PGSC0003DMG401024183 Solanum tuberosum HOM05D000286 ORTHO05D000170 2.2e-06 54.7 45 57.8
CiPaw.03G061400 Carya illinoinensis HOM05D000286 ORTHO05D000170 2.9e-06 54.3 45 60.0
Ciclev10012092m.g Citrus clementina HOM05D000286 ORTHO05D000170 2.9e-06 54.3 46 58.7
Duzib138G1029 Durio zibethinus HOM05D000286 ORTHO05D000170 2.9e-06 54.3 45 57.8
MBI16_g23777_MAGBIO Magnolia biondii HOM05D000286 ORTHO05D000170 2.9e-06 54.3 46 60.9
MD17G1244600 Malus domestica HOM05D000286 ORTHO05D000170 2.9e-06 54.3 46 56.5
Medtr7g007260 Medicago truncatula HOM05D000286 ORTHO05D000170 2.9e-06 54.3 46 58.7
Nitab4.5_0001217g0020 Nicotiana tabacum HOM05D000286 ORTHO05D000170 2.9e-06 54.3 45 60.0
PGSC0003DMG400010417 Solanum tuberosum HOM05D000286 ORTHO05D000170 2.9e-06 54.3 46 58.7
CAN.G225.3 Capsicum annuum HOM05D000286 ORTHO05D000170 3.8e-06 53.9 45 55.6
FvH4_3g25850 Fragaria vesca HOM05D000286 ORTHO05D000170 3.8e-06 53.9 46 58.7
Potri.017G114800 Populus trichocarpa HOM05D000286 ORTHO05D000170 3.8e-06 53.9 46 63.0
THA.LOC104802440 Tarenaya hassleriana HOM05D000286 ORTHO05D000170 3.8e-06 53.9 46 63.0
Actinidia36319 Actinidia chinensis HOM05D000286 ORTHO05D000170 5.0e-06 53.5 45 60.0
CANSAT78G0849 Cannabis sativa HOM05D000286 ORTHO05D000170 5.0e-06 53.5 46 65.2
Haze_14151 Corylus avellana HOM05D000286 ORTHO05D000170 5.0e-06 53.5 46 56.5
PSO478G2988 Papaver somniferum HOM05D000286 ORTHO05D000170 5.0e-06 53.5 46 60.9
TPR.G9722 Trifolium pratense HOM05D000286 ORTHO05D000170 6.5e-06 53.1 46 56.5
CDE04G1471 Ceratophyllum demersum HOM05D000286 ORTHO05D000170 8.5e-06 52.8 46 63.0


User provided reference genes

Program Settings