Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G109 Trifolium pratense HOM05D003443 ORTHO05D008640 3.3e-19 97.4 51 100.0
Psat2g087720 Pisum sativum HOM05D003443 ORTHO05D008640 3.1e-17 90.9 51 90.2
Medtr5g058660 Medicago truncatula HOM05D003443 ORTHO05D008640 8.9e-17 89.4 51 92.2
Medtr5g059030 Medicago truncatula HOM05D003443 ORTHO05D008640 8.9e-17 89.4 51 92.2
Ca_26970_v3 Cicer arietinum L. HOM05D003443 ORTHO05D008640 7.6e-16 86.3 51 88.2
Lj1g0013808 Lotus japonicus HOM05D003443 ORTHO05D008640 2.7e-13 77.8 51 78.4
VMungo0647G0179 Vigna mungo HOM05D003443 ORTHO05D008640 8.7e-12 72.8 52 76.9
Glyma.14G162600 Glycine max HOM05D003443 ORTHO05D008640 2.1e-10 68.2 52 71.2
Lalb_Chr10g0101911 Lupinus albus HOM05D003443 ORTHO05D008640 8.1e-10 66.2 49 67.3
CiPaw.05G224500 Carya illinoinensis HOM05D003443 ORTHO05D008640 5.8e-08 60.1 41 78.0
Sabra02G0067600 Salix brachista HOM05D003443 ORTHO05D008640 2.2e-07 58.2 41 73.2
Atru.chr13.1408 Acer truncatum HOM05D003443 ORTHO05D008640 4.9e-07 57.0 41 70.7
Manes.18G075200 Manihot esculenta HOM05D003443 ORTHO05D008640 4.9e-07 57.0 41 73.2
Potri.002G086200 Populus trichocarpa HOM05D003443 ORTHO05D008640 6.4e-07 56.6 41 70.7
Eucgr.L01689 Eucalyptus grandis HOM05D003443 ORTHO05D008640 8.4e-07 56.2 40 70.0
Cfa015987 Carpinus fangiana HOM05D003443 ORTHO05D009887 2.4e-06 54.7 40 75.0
Gorai.009G244100 Gossypium raimondii HOM05D003443 ORTHO05D008640 3.2e-06 54.3 41 68.3
Carub.0006s2677 Capsella rubella HOM05D003443 ORTHO05D008640 4.2e-06 53.9 39 69.2
Gohir.A05G233400 Gossypium hirsutum HOM05D003443 ORTHO05D008640 5.4e-06 53.5 41 65.9
GSVIVG01008902001 Vitis vinifera HOM05D003443 ORTHO05D008640 5.4e-06 53.5 41 63.4
arahy.Tifrunner.gnm1.ann1.B00VWE Arachis hypogaea HOM05D003443 ORTHO05D008640 7.1e-06 53.1 49 55.1
arahy.Tifrunner.gnm1.ann1.ZIXY5S Arachis hypogaea HOM05D003443 ORTHO05D008640 7.1e-06 53.1 49 53.1
Aa31LG9G14320 Aethionema arabicum HOM05D003443 ORTHO05D008640 9.3e-06 52.8 50 54.0
Dinv40389 Davidia involucrata HOM05D003443 ORTHO05D008640 9.3e-06 52.8 39 69.2
Gohir.D05G235800 Gossypium hirsutum HOM05D003443 ORTHO05D008640 9.3e-06 52.8 41 65.9


User provided reference genes

Program Settings