Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G10899 Trifolium pratense HOM05D002619 ORTHO05D002804 3.1e-57 224.9 117 100.0
Ca_19195_v3 Cicer arietinum L. HOM05D002619 ORTHO05D002804 1.9e-22 109.4 120 55.8
Lj3g0007491 Lotus japonicus HOM05D002619 ORTHO05D002804 5.2e-20 101.3 127 54.3
arahy.Tifrunner.gnm1.ann1.J9PDVA Arachis hypogaea HOM05D002619 ORTHO05D002804 1.5e-14 83.2 124 45.2
Lalb_Chr03g0026881 Lupinus albus HOM05D002619 ORTHO05D002804 4.3e-14 81.6 117 48.7
arahy.Tifrunner.gnm1.ann1.13MW22 Arachis hypogaea HOM05D002619 ORTHO05D002804 5.6e-14 81.3 124 44.4
Lalb_Chr01g0003831 Lupinus albus HOM05D002619 ORTHO05D002804 7.3e-14 80.9 116 47.4
Glyma.11G143300 Glycine max HOM05D002619 ORTHO05D002804 2.1e-13 79.3 119 47.1
Medtr4g063070 Medicago truncatula HOM05D002619 ORTHO05D002804 2.1e-13 79.3 82 54.9
VMungo1127G0824 Vigna mungo HOM05D002619 ORTHO05D002804 8.9e-12 73.9 109 43.1
Glyma.12G066500 Glycine max HOM05D002619 ORTHO05D002804 2.0e-11 72.8 118 44.9
Glyma.15G041400 Glycine max HOM05D002619 ORTHO05D002804 2.6e-11 72.4 46 63.0
Potri.009G027100 Populus trichocarpa HOM05D002619 ORTHO05D002804 2.9e-10 68.9 117 40.2
Potri.001G235200 Populus trichocarpa HOM05D002619 ORTHO05D002804 4.9e-10 68.2 118 44.9
Glyma.13G332900 Glycine max HOM05D002619 ORTHO05D002804 6.4e-10 67.8 97 38.1
Phvul.011G067500 Phaseolus vulgaris HOM05D002619 ORTHO05D002804 1.1e-09 67.0 108 42.6
arahy.Tifrunner.gnm1.ann1.6E5JYA Arachis hypogaea HOM05D002619 ORTHO05D002804 1.4e-09 66.6 91 47.3
Sabra09G0018200 Salix brachista HOM05D002619 ORTHO05D002804 3.2e-09 65.5 83 44.6
Medtr2g096360 Medicago truncatula HOM05D002619 ORTHO05D002804 9.2e-09 63.9 52 53.8
Lalb_Chr24g0394271 Lupinus albus HOM05D002619 ORTHO05D002804 1.2e-08 63.5 91 45.1
Ca_01347_v3 Cicer arietinum L. HOM05D002619 ORTHO05D002804 1.6e-08 63.2 79 43.0
Ca_27691_v3 Cicer arietinum L. HOM05D002619 ORTHO05D002804 1.6e-08 63.2 79 43.0
TWI31G0042 Tripterygium wilfordii HOM05D002619 ORTHO05D002804 1.6e-08 63.2 92 40.2
Lj3g0023082 Lotus japonicus HOM05D002619 ORTHO05D002804 2.1e-08 62.8 113 38.9
arahy.Tifrunner.gnm1.ann1.S371Q2 Arachis hypogaea HOM05D002619 ORTHO05D002804 3.5e-08 62.0 91 42.9
CANSAT54G2555 Cannabis sativa HOM05D002619 ORTHO05D002804 1.3e-07 60.1 117 38.5
RcHm_v2.0_Chr5g0062781 Rosa chinensis HOM05D002619 ORTHO05D002804 1.7e-07 59.7 73 49.3
Actinidia07071 Actinidia chinensis HOM05D002619 ORTHO05D002804 3.0e-07 58.9 98 41.8
HanXRQChr01g0009911 Helianthus annuus HOM05D002619 ORTHO05D002804 3.0e-07 58.9 35 71.4
Nitab4.5_0003179g0060 Nicotiana tabacum HOM05D002619 ORTHO05D002804 3.9e-07 58.5 118 38.1
HanXRQChr11g0340291 Helianthus annuus HOM05D002619 ORTHO05D002804 5.1e-07 58.2 32 78.1
Sed0024909 Sechium edule HOM05D002619 ORTHO05D002804 6.6e-07 57.8 91 45.1
Eucgr.J02075 Eucalyptus grandis HOM05D002619 ORTHO05D002804 8.6e-07 57.4 122 31.1
Gorai.003G136700 Gossypium raimondii HOM05D002619 ORTHO05D002804 8.6e-07 57.4 84 39.3
Potri.008G010100 Populus trichocarpa HOM05D002619 ORTHO05D002804 8.6e-07 57.4 108 38.9
TPR.G34317 Trifolium pratense HOM05D002619 ORTHO05D002804 8.6e-07 57.4 77 36.4
Gohir.D03G130000 Gossypium hirsutum HOM05D002619 ORTHO05D002804 1.1e-06 57.0 87 40.2
Sabra06G0200800 Salix brachista HOM05D002619 ORTHO05D002804 1.5e-06 56.6 41 58.5
GSVIVG01025607001 Vitis vinifera HOM05D000001 ORTHO05D009784 1.5e-06 56.6 106 35.8
Cc01_g12250 Coffea canephora HOM05D002619 ORTHO05D002804 1.9e-06 56.2 38 60.5
MSTRG.12631 Avicennia marina HOM05D002619 ORTHO05D002804 2.5e-06 55.8 38 60.5
Migut.N02660 Erythranthe guttata HOM05D002619 ORTHO05D002804 2.5e-06 55.8 37 67.6
Psat7g219480 Pisum sativum HOM05D002619 ORTHO05D002804 3.3e-06 55.5 107 41.1
Sabra06G0201000 Salix brachista HOM05D002619 ORTHO05D002804 3.3e-06 55.5 116 37.1
Sed0027582 Sechium edule HOM05D002307 ORTHO05D002378 4.3e-06 55.1 67 49.3
CSS0041199 Camellia sinensis var. sinensis HOM05D002619 ORTHO05D002804 5.6e-06 54.7 119 37.0
Gohir.A13G229100 Gossypium hirsutum HOM05D002619 ORTHO05D002804 5.6e-06 54.7 91 37.4
Peaxi162Scf00406g00007 Petunia axillaris HOM05D002619 ORTHO05D002804 5.6e-06 54.7 125 36.0
FAN25G3511 Fragaria x ananassa HOM05D002619 ORTHO05D002804 7.3e-06 54.3 86 36.0
Nitab4.5_0003179g0010 Nicotiana tabacum HOM05D002619 ORTHO05D002804 7.3e-06 54.3 46 50.0
DCAR_005304 Daucus carota HOM05D002619 ORTHO05D002804 9.5e-06 53.9 119 36.1
Nitab4.5_0000610g0250 Nicotiana tabacum HOM05D002619 ORTHO05D002804 9.5e-06 53.9 101 37.6
Nitab4.5_0000610g0280 Nicotiana tabacum HOM05D002619 ORTHO05D002804 9.5e-06 53.9 46 47.8
Oeu062318.1 Olea europaea HOM05D002619 ORTHO05D002804 9.5e-06 53.9 38 60.5


User provided reference genes

Program Settings