Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G10873 Trifolium pratense HOM05D003634 ORTHO05D004146 4.7e-36 154.1 81 100.0
Medtr3g449930 Medicago truncatula HOM05D003634 ORTHO05D004146 1.1e-29 132.9 81 90.1
Psat5g189160 Pisum sativum HOM05D003634 ORTHO05D004146 6.1e-28 127.1 81 81.5
Ca_13941_v3 Cicer arietinum L. HOM05D003634 ORTHO05D004146 2.9e-25 118.2 86 80.2
Phvul.006G027801 Phaseolus vulgaris HOM05D003634 ORTHO05D004146 2.7e-23 111.7 81 72.8
Glyma.02G282500 Glycine max HOM05D003634 ORTHO05D004146 4.6e-23 110.9 81 76.5
arahy.Tifrunner.gnm1.ann1.MMUF9T Arachis hypogaea HOM05D003634 ORTHO05D004146 5.9e-23 110.5 81 72.8
Lj6g0020294 Lotus japonicus HOM05D003634 ORTHO05D004146 5.9e-23 110.5 81 76.5
VMungo0647G2531 Vigna mungo HOM05D003634 ORTHO05D004146 7.8e-23 110.2 84 75.0
arahy.Tifrunner.gnm1.ann1.30A6BG Arachis hypogaea HOM05D003634 ORTHO05D004146 1.0e-22 109.8 81 77.8
Glyma.08G304200 Glycine max HOM05D003634 ORTHO05D004146 2.3e-22 108.6 82 73.2
arahy.Tifrunner.gnm1.ann1.1944SK Arachis hypogaea HOM05D003634 ORTHO05D004146 3.9e-22 107.8 81 76.5
Phvul.008G196500 Phaseolus vulgaris HOM05D003634 ORTHO05D004146 6.6e-22 107.1 81 72.8
VMungo0540G1926 Vigna mungo HOM05D003634 ORTHO05D004146 2.5e-21 105.1 82 70.7
Glyma.18G114900 Glycine max HOM05D003634 ORTHO05D004146 5.6e-21 104.0 85 69.4
Cc05_g00840 Coffea canephora HOM05D003634 ORTHO05D004146 2.8e-20 101.7 83 66.3
Ah.02g120770 Amaranthus hybridus HOM05D003634 ORTHO05D004146 4.7e-20 100.9 84 69.0
Nn7g37873 Nelumbo nucifera HOM05D003634 ORTHO05D004146 4.7e-20 100.9 81 69.1
Lalb_Chr04g0249011 Lupinus albus HOM05D003634 ORTHO05D004146 1.4e-19 99.4 84 70.2
Peaxi162Scf00359g01218 Petunia axillaris HOM05D003634 ORTHO05D004146 2.3e-19 98.6 83 65.1
Glyma.14G031800 Glycine max HOM05D003634 ORTHO05D004146 3.1e-19 98.2 85 70.6
CSS0028528 Camellia sinensis var. sinensis HOM05D003634 ORTHO05D004146 4.0e-19 97.8 87 63.2
QL08p045530 Quercus lobata HOM05D003634 ORTHO05D004146 4.0e-19 97.8 84 67.9
EL10Ac6g15357 Beta vulgaris HOM05D003634 ORTHO05D004146 6.8e-19 97.1 84 66.7
AUR62017838 Chenopodium quinoa HOM05D003634 ORTHO05D004146 2.6e-18 95.1 85 63.5
Dinv20234 Davidia involucrata HOM05D003634 ORTHO05D004146 2.6e-18 95.1 85 65.9
MBI18_g28201_MAGBIO Magnolia biondii HOM05D003634 ORTHO05D004146 3.4e-18 94.7 81 64.2
AUR62003524 Chenopodium quinoa HOM05D003634 ORTHO05D004146 4.4e-18 94.4 83 61.4
Ciclev10032502m.g Citrus clementina HOM05D003634 ORTHO05D004146 4.4e-18 94.4 84 66.7
LjContig00049g0021127 Lotus japonicus HOM05D003634 ORTHO05D004146 4.4e-18 94.4 81 65.4
PGR142G4178 Punica granatum HOM05D003634 ORTHO05D004146 4.4e-18 94.4 83 66.3
Cfa023023 Carpinus fangiana HOM05D003634 ORTHO05D004146 7.5e-18 93.6 81 65.4
Haze_13608 Corylus avellana HOM05D003634 ORTHO05D004146 7.5e-18 93.6 81 65.4
Atru.chr6.2016 Acer truncatum HOM05D003634 ORTHO05D004146 9.8e-18 93.2 85 65.9
Duzib264G1267 Durio zibethinus HOM05D003634 ORTHO05D004146 9.8e-18 93.2 84 65.5
Potri.002G055700 Populus trichocarpa HOM05D003634 ORTHO05D004146 9.8e-18 93.2 86 64.0
Lalb_Chr17g0348121 Lupinus albus HOM05D003634 ORTHO05D004146 2.9e-17 91.7 85 67.1
Aqoxy1G01593 Aquilegia oxysepala HOM05D003634 ORTHO05D004146 4.9e-17 90.9 83 62.7
Gohir.D04G034900 Gossypium hirsutum HOM05D003634 ORTHO05D004146 4.9e-17 90.9 86 66.3
Gorai.012G039400 Gossypium raimondii HOM05D003634 ORTHO05D004146 4.9e-17 90.9 86 66.3
Potri.005G206700 Populus trichocarpa HOM05D003634 ORTHO05D004146 8.3e-17 90.1 85 62.4
CiPaw.04G137000 Carya illinoinensis HOM05D003634 ORTHO05D004146 1.4e-16 89.4 86 64.0
CDE12G0092 Ceratophyllum demersum HOM05D003634 ORTHO05D004146 1.4e-16 89.4 81 59.3
Rhsim12G0013500 Rhododendron simsii HOM05D003634 ORTHO05D004146 1.4e-16 89.4 84 61.9
vmacro08742 Vaccinium macrocarpon HOM05D003634 ORTHO05D004146 1.4e-16 89.4 85 63.5
MBI02_g35794_MAGBIO Magnolia biondii HOM05D003634 ORTHO05D004146 1.9e-16 89.0 81 61.7
Sabra05G0157200 Salix brachista HOM05D003634 ORTHO05D004146 1.9e-16 89.0 83 61.4
Eucgr.A02039 Eucalyptus grandis HOM05D003634 ORTHO05D004146 2.4e-16 88.6 82 62.2
Gohir.A05G380700 Gossypium hirsutum HOM05D003634 ORTHO05D004146 2.4e-16 88.6 86 65.1
Thecc.01G166600 Theobroma cacao HOM05D003634 ORTHO05D004146 2.4e-16 88.6 91 60.4
Nitab4.5_0008321g0040 Nicotiana tabacum HOM05D003634 ORTHO05D004146 3.2e-16 88.2 89 64.0
Sabra02G0045200 Salix brachista HOM05D003634 ORTHO05D004146 5.4e-16 87.4 85 61.2
Ah.03g147560 Amaranthus hybridus HOM05D003634 ORTHO05D004146 7.0e-16 87.0 87 62.1
Solyc07g044860.3 Solanum lycopersicum HOM05D003634 ORTHO05D004146 7.0e-16 87.0 81 61.7
Prupe.3G179400 Prunus persica HOM05D003634 ORTHO05D004146 9.2e-16 86.7 84 64.3
Manes.02G089900 Manihot esculenta HOM05D003634 ORTHO05D004146 1.2e-15 86.3 84 60.7
TWI23G0402 Tripterygium wilfordii HOM05D003634 ORTHO05D004146 1.2e-15 86.3 84 56.0
SGA_v2.0_scaffold49G18386 Striga asiatica HOM05D003634 ORTHO05D004146 1.6e-15 85.9 83 56.6
PGSC0003DMG400000926 Solanum tuberosum HOM05D003634 ORTHO05D004146 2.7e-15 85.1 81 59.3
DCAR_009820 Daucus carota HOM05D003634 ORTHO05D004146 3.5e-15 84.7 84 60.7
Lalb_Chr10g0106481 Lupinus albus HOM05D003634 ORTHO05D004146 4.6e-15 84.3 86 61.6
MSTRG.14106 Avicennia marina HOM05D003634 ORTHO05D004146 6.0e-15 84.0 85 58.8
CAN.G212.2 Capsicum annuum HOM05D003634 ORTHO05D004146 1.3e-14 82.8 83 57.8
Cpa.g.sc187.7 Carica papaya HOM05D003634 ORTHO05D004146 1.7e-14 82.4 85 58.8
Sopen07g023420 Solanum pennellii HOM05D003634 ORTHO05D004146 1.7e-14 82.4 81 59.3
Nitab4.5_0000019g0250 Nicotiana tabacum HOM05D003634 ORTHO05D004146 2.3e-14 82.0 87 63.2
Hund04362 Selenicereus undatus HOM05D003634 ORTHO05D004146 5.0e-14 80.9 86 53.5
DCAR_023039 Daucus carota HOM05D003634 ORTHO05D004146 6.6e-14 80.5 84 56.0
PSO675G5089 Papaver somniferum HOM05D003634 ORTHO05D004146 8.6e-14 80.1 85 58.8
BcaNung05935 Brassica carinata HOM05D003634 ORTHO05D004146 1.1e-13 79.7 85 57.6
CDE04G2981 Ceratophyllum demersum HOM05D003634 ORTHO05D004146 1.5e-13 79.3 81 53.1
Lj1A651T46 Lonicera japonica HOM05D003634 ORTHO05D004146 1.5e-13 79.3 86 57.0
Manes.01G131300 Manihot esculenta HOM05D003634 ORTHO05D004146 1.5e-13 79.3 86 58.1
MSTRG.12265 Avicennia marina HOM05D003634 ORTHO05D004146 2.5e-13 78.6 87 55.2
Sed0008663 Sechium edule HOM05D003634 ORTHO05D004146 2.5e-13 78.6 82 58.5
A09p66850 Brassica napus HOM05D003634 ORTHO05D004146 3.3e-13 78.2 85 56.5
BolC8t52634H Brassica oleracea HOM05D003634 ORTHO05D004146 3.3e-13 78.2 85 56.5
PSO541G1729 Papaver somniferum HOM05D003634 ORTHO05D004146 3.3e-13 78.2 84 54.8
A10p05270 Brassica napus HOM05D003634 ORTHO05D004146 4.3e-13 77.8 85 56.5
BraA10t42792Z Brassica rapa HOM05D003634 ORTHO05D004146 4.3e-13 77.8 85 56.5
Oeu056845.1 Olea europaea HOM05D003634 ORTHO05D004146 5.6e-13 77.4 81 58.0
Oeu056847.1 Olea europaea HOM05D003634 ORTHO05D004146 5.6e-13 77.4 81 58.0
AL4G25720 Arabidopsis lyrata HOM05D003634 ORTHO05D004146 9.5e-13 76.6 84 52.4
C08p51070 Brassica napus HOM05D003634 ORTHO05D004146 9.5e-13 76.6 85 55.3
BraA09t42022Z Brassica rapa HOM05D003634 ORTHO05D004146 9.5e-13 76.6 85 55.3
COL.COLO4_29888 Corchorus olitorius HOM05D003634 ORTHO05D004146 9.5e-13 76.6 62 67.7
Migut.H01272 Erythranthe guttata HOM05D003634 ORTHO05D004146 1.2e-12 76.3 84 52.4
BcaC07g42054 Brassica carinata HOM05D003634 ORTHO05D004146 2.1e-12 75.5 87 56.3
Sp1g05410 Schrenkiella parvula HOM05D003634 ORTHO05D004146 3.6e-12 74.7 84 53.6
BcaB01g04916 Brassica carinata HOM05D003634 ORTHO05D004146 4.7e-12 74.3 85 52.9
Thhalv10008504m.g Eutrema salsugineum HOM05D003634 ORTHO05D004146 4.7e-12 74.3 86 57.0
BolC5t29259H Brassica oleracea HOM05D003634 ORTHO05D004146 6.2e-12 73.9 86 55.8
Lsat_1_v5_gn_3_35220 Lactuca sativa HOM05D003634 ORTHO05D004146 6.2e-12 73.9 85 60.0
AL1G16690 Arabidopsis lyrata HOM05D003634 ORTHO05D004146 8.1e-12 73.6 86 55.8
C05p04870 Brassica napus HOM05D003634 ORTHO05D004146 8.1e-12 73.6 86 55.8
Carub.0001s0601 Capsella rubella HOM05D003634 ORTHO05D004146 8.1e-12 73.6 86 55.8
CARHR006360 Cardamine hirsuta HOM05D003634 ORTHO05D004146 8.1e-12 73.6 86 55.8
Psat2g018280 Pisum sativum HOM05D003634 ORTHO05D004146 8.1e-12 73.6 90 54.4
Aa31LG5G6070 Aethionema arabicum HOM05D003634 ORTHO05D004146 1.4e-11 72.8 86 51.2
AT1G06680 Arabidopsis thaliana HOM05D003634 ORTHO05D004146 1.4e-11 72.8 86 54.7
Oeu012357.1 Olea europaea HOM05D003634 ORTHO05D004146 1.4e-11 72.8 85 54.1
BcaB02g10342 Brassica carinata HOM05D003634 ORTHO05D004146 1.8e-11 72.4 85 52.9
BcaC02g11165 Brassica carinata HOM05D003634 ORTHO05D004146 2.3e-11 72.0 84 53.6
C04p19800 Brassica napus HOM05D003634 ORTHO05D004146 2.3e-11 72.0 84 53.6
BolC4t23513H Brassica oleracea HOM05D003634 ORTHO05D004146 2.3e-11 72.0 84 53.6
Carub.0004s1200 Capsella rubella HOM05D003634 ORTHO05D004146 2.3e-11 72.0 85 50.6
CAN.G488.26 Capsicum annuum HOM05D003634 ORTHO05D004146 2.3e-11 72.0 79 54.4
Aa31LG1G7720 Aethionema arabicum HOM05D003634 ORTHO05D004146 3.1e-11 71.6 83 53.0
Medtr5g090410 Medicago truncatula HOM05D003634 ORTHO05D004146 3.1e-11 71.6 88 54.5
Gohir.A10G151800 Gossypium hirsutum HOM05D003634 ORTHO05D004146 4.0e-11 71.2 91 52.7
TPR.G8779 Trifolium pratense HOM05D003634 ORTHO05D004146 4.0e-11 71.2 86 55.8
HanXRQChr04g0099261 Helianthus annuus HOM05D003634 ORTHO05D004146 5.2e-11 70.9 84 54.8
ATR0681G398 Amborella trichopoda HOM05D003634 ORTHO05D004146 6.8e-11 70.5 80 52.5
VMungo1080G1482 Vigna mungo HOM05D000073 ORTHO05D000033 6.8e-11 70.5 82 58.5
CANSAT64G2967 Cannabis sativa HOM05D003634 ORTHO05D004146 1.5e-10 69.3 85 51.8
ECA246G2888 Erigeron canadensis HOM05D003634 ORTHO05D004146 1.5e-10 69.3 83 51.8
HanXRQChr05g0129681 Helianthus annuus HOM05D003634 ORTHO05D004146 1.5e-10 69.3 81 54.3
Sc07g0004260 Simmondsia chinensis HOM05D003634 ORTHO05D004146 1.5e-10 69.3 85 52.9
BcaC07g36796 Brassica carinata HOM05D003634 ORTHO05D004146 2.0e-10 68.9 87 54.0
C08p02670 Brassica napus HOM05D003634 ORTHO05D004146 2.0e-10 68.9 87 54.0
BolC8t47063H Brassica oleracea HOM05D003634 ORTHO05D004146 2.0e-10 68.9 87 54.0
Sed0027030 Sechium edule HOM05D003634 ORTHO05D004146 2.6e-10 68.6 83 49.4
A08p35900 Brassica napus HOM05D003634 ORTHO05D004146 3.4e-10 68.2 87 54.0
BraA08t35497Z Brassica rapa HOM05D003634 ORTHO05D004146 3.4e-10 68.2 87 54.0
Lj8C98T13 Lonicera japonica HOM05D003634 ORTHO05D004146 3.4e-10 68.2 91 49.5
unitig_52.g17321 Utricularia gibba HOM05D003634 ORTHO05D004146 3.4e-10 68.2 82 48.8
A05p14800 Brassica napus HOM05D003634 ORTHO05D004146 4.4e-10 67.8 85 48.2
BraA05t20408Z Brassica rapa HOM05D003634 ORTHO05D004146 4.4e-10 67.8 85 48.2
SalBow7G4383 Salvia bowleyana HOM05D003634 ORTHO05D004146 5.8e-10 67.4 82 47.6
THA.LOC104826247 Tarenaya hassleriana HOM05D003634 ORTHO05D004146 5.8e-10 67.4 85 47.1
TWI14G0595 Tripterygium wilfordii HOM05D003634 ORTHO05D004146 5.8e-10 67.4 90 46.7
Actinidia12527 Actinidia chinensis HOM05D003634 ORTHO05D004146 7.5e-10 67.0 86 54.7
Phvul.005G151800 Phaseolus vulgaris HOM05D000073 ORTHO05D000033 7.5e-10 67.0 80 55.0
HPP92_015688 Vanilla planifolia HOM05D003634 ORTHO05D004146 7.5e-10 67.0 81 49.4
CARHR124260 Cardamine hirsuta HOM05D003634 ORTHO05D004146 9.9e-10 66.6 81 46.9
HanXRQChr06g0171591 Helianthus annuus HOM05D003634 ORTHO05D004146 1.3e-09 66.2 88 47.7
Nitab4.5_0005601g0020 Nicotiana tabacum HOM05D003634 ORTHO05D004146 1.3e-09 66.2 74 60.8
Actinidia07505 Actinidia chinensis HOM05D003634 ORTHO05D004146 1.7e-09 65.9 89 53.9
Gohir.D10G114500 Gossypium hirsutum HOM05D003634 ORTHO05D004146 2.2e-09 65.5 91 48.4
PGR042G1985 Punica granatum HOM05D003634 ORTHO05D004146 2.2e-09 65.5 84 53.6
Phvul.005G151700 Phaseolus vulgaris HOM05D000073 ORTHO05D000033 6.4e-09 63.9 80 53.8
VMungo1080G0223 Vigna mungo HOM05D000073 ORTHO05D000033 6.4e-09 63.9 80 53.8
Thhalv10017096m.g Eutrema salsugineum HOM05D003634 ORTHO05D004146 8.3e-09 63.5 86 50.0
PGSC0003DMG400031395 Solanum tuberosum HOM05D003634 ORTHO05D004146 8.3e-09 63.5 79 48.1
FAN05G3719 Fragaria x ananassa HOM05D003634 ORTHO05D004146 1.9e-08 62.4 86 47.7
Nitab4.5_0006644g0080 Nicotiana tabacum HOM05D003634 ORTHO05D004146 2.4e-08 62.0 77 54.5
unitig_578.g16007 Utricularia gibba HOM05D003634 ORTHO05D004146 2.4e-08 62.0 82 53.7
FvH4_6g38900 Fragaria vesca HOM05D003634 ORTHO05D004146 3.2e-08 61.6 86 47.7
FAN02G0185 Fragaria x ananassa HOM05D003634 ORTHO05D004146 3.2e-08 61.6 86 47.7
FAN14G5409 Fragaria x ananassa HOM05D003634 ORTHO05D004146 3.2e-08 61.6 86 47.7
VMungo1080G0774 Vigna mungo HOM05D000073 ORTHO05D000033 5.4e-08 60.8 82 53.7
VMungo1080G1514 Vigna mungo HOM05D000073 ORTHO05D000033 7.1e-08 60.5 80 55.0
Zm00001eb117670 Zea mays HOM05D003634 ORTHO05D004146 1.2e-07 59.7 82 52.4
FAN09G2615 Fragaria x ananassa HOM05D003634 ORTHO05D004146 2.1e-07 58.9 86 46.5
MD09G1146300 Malus domestica HOM05D003634 ORTHO05D004146 2.1e-07 58.9 87 46.0
MD17G1132900 Malus domestica HOM05D003634 ORTHO05D004146 2.1e-07 58.9 87 46.0
Os07g0141400 Oryza sativa ssp. japonica HOM05D003634 ORTHO05D004146 2.1e-07 58.9 82 52.4
Gorai.011G126200 Gossypium raimondii HOM05D003634 ORTHO05D004146 2.7e-07 58.5 90 44.4
SEGI_24342 Sequoiadendron giganteum HOM05D003634 ORTHO05D004146 2.7e-07 58.5 72 51.4
unitig_8.g4601 Utricularia gibba HOM05D003634 ORTHO05D004146 3.0e-06 55.1 82 47.6
THA.LOC104816082 Tarenaya hassleriana HOM05D003634 ORTHO05D004146 5.1e-06 54.3 63 57.1


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