Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G10852 Trifolium pratense HOM05D005630 ORTHO05D006979 1.6e-38 162.5 100 100.0
TPR.G31501 Trifolium pratense HOM05D005630 ORTHO05D006979 6.9e-21 104.0 49 100.0
Psat3g037680 Pisum sativum HOM05D005630 ORTHO05D006979 1.3e-19 99.8 49 93.9
Psat5g026240 Pisum sativum HOM05D005630 ORTHO05D006979 1.3e-19 99.8 49 93.9
TPR.G21379 Trifolium pratense HOM05D005630 ORTHO05D006979 2.9e-19 98.6 49 91.8
Ca_08945_v3 Cicer arietinum L. HOM05D005630 ORTHO05D006979 3.8e-19 98.2 49 91.8
Medtr6g088605 Medicago truncatula HOM05D005630 ORTHO05D006979 4.9e-19 97.8 49 87.8
Medtr7g103190 Medicago truncatula HOM05D005630 ORTHO05D006979 8.4e-19 97.1 49 89.8
Lalb_Chr01g0020901 Lupinus albus HOM05D005630 ORTHO05D006979 7.9e-17 90.5 49 81.6
Lj3g0020108 Lotus japonicus HOM05D005630 ORTHO05D006979 1.5e-15 86.3 49 75.5
Glyma.01G008800 Glycine max HOM05D005630 ORTHO05D006979 2.5e-15 85.5 49 71.4
Lj2g0025219 Lotus japonicus HOM05D005630 ORTHO05D006979 9.6e-15 83.6 49 73.5
Glyma.16G077600 Glycine max HOM05D005630 ORTHO05D006979 1.6e-14 82.8 49 69.4
MD02G1012200 Malus domestica HOM05D005630 ORTHO05D006979 2.8e-14 82.0 49 71.4
SalBow1G1736 Salvia bowleyana HOM05D005630 ORTHO05D006979 2.8e-14 82.0 49 75.5
Sed0022514 Sechium edule HOM05D005630 ORTHO05D006979 2.8e-14 82.0 49 75.5
arahy.Tifrunner.gnm1.ann1.N9H741 Arachis hypogaea HOM05D005630 ORTHO05D006979 3.7e-14 81.6 49 73.5
BcaB06g25926 Brassica carinata HOM05D005630 ORTHO05D006979 3.7e-14 81.6 49 75.5
CSS0013521 Camellia sinensis var. sinensis HOM05D005630 ORTHO05D006979 3.7e-14 81.6 49 75.5
Rhsim03G0057400 Rhododendron simsii HOM05D005630 ORTHO05D006979 3.7e-14 81.6 55 69.1
vmacro07529 Vaccinium macrocarpon HOM05D005630 ORTHO05D006979 3.7e-14 81.6 49 73.5
VMungo0464G1149 Vigna mungo HOM05D005630 ORTHO05D006979 3.7e-14 81.6 49 71.4
BcaB04g19003 Brassica carinata HOM05D005630 ORTHO05D006979 4.8e-14 81.3 49 75.5
C03p49710 Brassica napus HOM05D005630 ORTHO05D006979 4.8e-14 81.3 49 75.5
BolC3t17269H Brassica oleracea HOM05D005630 ORTHO05D006979 4.8e-14 81.3 49 75.5
CANSAT11G0524 Cannabis sativa HOM05D005630 ORTHO05D006979 4.8e-14 81.3 49 75.5
CARHR094150 Cardamine hirsuta HOM05D005630 ORTHO05D006979 4.8e-14 81.3 49 73.5
Cfa020874 Carpinus fangiana HOM05D005630 ORTHO05D006979 4.8e-14 81.3 49 75.5
AL3G32110 Arabidopsis lyrata HOM05D005630 ORTHO05D006979 6.2e-14 80.9 49 73.5
AT3G18760 Arabidopsis thaliana HOM05D005630 ORTHO05D006979 6.2e-14 80.9 49 73.5
A03p40820 Brassica napus HOM05D005630 ORTHO05D006979 6.2e-14 80.9 49 75.5
Sp3g16800 Schrenkiella parvula HOM05D005630 ORTHO05D006979 6.2e-14 80.9 49 75.5
BcaC05g28577 Brassica carinata HOM05D005630 ORTHO05D006979 8.1e-14 80.5 49 73.5
C05p46800 Brassica napus HOM05D005630 ORTHO05D006979 8.1e-14 80.5 49 73.5
BolC5t33410H Brassica oleracea HOM05D005630 ORTHO05D006979 8.1e-14 80.5 49 73.5
BraA03t13240Z Brassica rapa HOM05D005630 ORTHO05D006979 8.1e-14 80.5 49 73.5
Nn8g40117 Nelumbo nucifera HOM05D005630 ORTHO05D006979 8.1e-14 80.5 55 67.3
Peaxi162Scf00083g01117 Petunia axillaris HOM05D005630 ORTHO05D006979 8.1e-14 80.5 57 61.4
A05p30870 Brassica napus HOM05D005630 ORTHO05D006979 1.1e-13 80.1 49 73.5
BraA05t21929Z Brassica rapa HOM05D005630 ORTHO05D006979 1.1e-13 80.1 49 73.5
Carub.0003s1855 Capsella rubella HOM05D005630 ORTHO05D006979 1.4e-13 79.7 49 73.5
Haze_19305 Corylus avellana HOM05D005630 ORTHO05D006979 1.4e-13 79.7 49 71.4
Phvul.004G170400 Phaseolus vulgaris HOM05D005630 ORTHO05D006979 1.4e-13 79.7 49 67.3
PGR142G4039 Punica granatum HOM05D005630 ORTHO05D006979 1.4e-13 79.7 49 71.4
CiPaw.04G061600 Carya illinoinensis HOM05D005630 ORTHO05D006979 1.8e-13 79.3 49 77.6
ClCG10G005100 Citrullus lanatus HOM05D005630 ORTHO05D006979 1.8e-13 79.3 49 73.5
Lsat_1_v5_gn_5_90640 Lactuca sativa HOM05D005630 ORTHO05D006979 1.8e-13 79.3 49 71.4
Potri.018G113200 Populus trichocarpa HOM05D005630 ORTHO05D006979 1.8e-13 79.3 49 71.4
Sc08g0004950 Simmondsia chinensis HOM05D005630 ORTHO05D006979 1.8e-13 79.3 49 71.4
Sopen02g029090 Solanum pennellii HOM05D005630 ORTHO05D006979 1.8e-13 79.3 49 71.4
TAR383G0582 Trochodendron aralioides HOM05D005630 ORTHO05D006979 1.8e-13 79.3 49 71.4
Gohir.D05G282200 Gossypium hirsutum HOM05D005630 ORTHO05D006979 2.4e-13 79.0 49 73.5
Gorai.009G295600 Gossypium raimondii HOM05D005630 ORTHO05D006979 2.4e-13 79.0 49 73.5
Oeu028785.1 Olea europaea HOM05D005630 ORTHO05D006979 2.4e-13 79.0 49 71.4
QL02p091555 Quercus lobata HOM05D005630 ORTHO05D006979 2.4e-13 79.0 49 75.5
Nitab4.5_0000914g0010 Nicotiana tabacum HOM05D005630 ORTHO05D006979 3.1e-13 78.6 49 71.4
PGSC0003DMG400023408 Solanum tuberosum HOM05D005630 ORTHO05D006979 3.1e-13 78.6 49 69.4
Atru.chr7.200 Acer truncatum HOM05D005630 ORTHO05D006979 4.0e-13 78.2 49 69.4
Cc06_g16720 Coffea canephora HOM05D005630 ORTHO05D006979 4.0e-13 78.2 49 73.5
Solyc05g054990.3 Solanum lycopersicum HOM05D005630 ORTHO05D006979 4.0e-13 78.2 49 67.3
Sopen05g033450 Solanum pennellii HOM05D005630 ORTHO05D006979 4.0e-13 78.2 49 67.3
MSTRG.19630 Avicennia marina HOM05D005630 ORTHO05D006979 5.3e-13 77.8 49 71.4
ECA234G3390 Erigeron canadensis HOM05D000399 ORTHO05D000304 5.3e-13 77.8 49 71.4
Lj7A451T27 Lonicera japonica HOM05D005630 ORTHO05D006979 5.3e-13 77.8 49 71.4
MD15G1158000 Malus domestica HOM05D005630 ORTHO05D006979 5.3e-13 77.8 49 69.4
Manes.03G015700 Manihot esculenta HOM05D005630 ORTHO05D006979 5.3e-13 77.8 49 67.3
Prupe.7G253200 Prunus persica HOM05D005630 ORTHO05D006979 5.3e-13 77.8 49 71.4
RcHm_v2.0_Chr2g0086501 Rosa chinensis HOM05D005630 ORTHO05D006979 5.3e-13 77.8 49 71.4
Solyc02g084380.3 Solanum lycopersicum HOM05D005630 ORTHO05D006979 5.3e-13 77.8 49 71.4
SGA_v2.0_scaffold336G49163 Striga asiatica HOM05D005630 ORTHO05D006979 5.3e-13 77.8 49 71.4
THA.LOC104826572 Tarenaya hassleriana HOM05D005630 ORTHO05D006979 5.3e-13 77.8 49 65.3
Aa31LG8G5570 Aethionema arabicum HOM05D005630 ORTHO05D006979 6.9e-13 77.4 49 69.4
Thhalv10021733m.g Eutrema salsugineum HOM05D005630 ORTHO05D006979 6.9e-13 77.4 49 67.3
Gohir.A05G280400 Gossypium hirsutum HOM05D005630 ORTHO05D006979 6.9e-13 77.4 49 71.4
Nitab4.5_0002880g0080 Nicotiana tabacum HOM05D005630 ORTHO05D006979 6.9e-13 77.4 57 61.4
CAN.G1505.19 Capsicum annuum HOM05D005630 ORTHO05D006979 9.0e-13 77.0 49 69.4
Duzib128G0941 Durio zibethinus HOM05D005630 ORTHO05D006979 9.0e-13 77.0 49 67.3
FvH4_1g01540 Fragaria vesca HOM05D005630 ORTHO05D006979 9.0e-13 77.0 49 71.4
FAN19G2317 Fragaria x ananassa HOM05D005630 ORTHO05D006979 9.0e-13 77.0 49 71.4
FAN23G2038 Fragaria x ananassa HOM05D005630 ORTHO05D006979 9.0e-13 77.0 49 69.4
FAN28G1107 Fragaria x ananassa HOM05D005630 ORTHO05D006979 9.0e-13 77.0 49 71.4
Prupe.3G048400 Prunus persica HOM05D005630 ORTHO05D006979 9.0e-13 77.0 49 71.4
THA.LOC104815401 Tarenaya hassleriana HOM05D005630 ORTHO05D006979 9.0e-13 77.0 49 65.3
Actinidia03956 Actinidia chinensis HOM05D005630 ORTHO05D006979 1.2e-12 76.6 49 71.4
MELO3C014176.2 Cucumis melo HOM05D005630 ORTHO05D006979 1.2e-12 76.6 49 73.5
TWI34G2008 Tripterygium wilfordii HOM05D005630 ORTHO05D006979 1.2e-12 76.6 49 69.4
Eucgr.H01228 Eucalyptus grandis HOM05D005630 ORTHO05D006979 1.5e-12 76.3 49 71.4
Eucgr.H01921 Eucalyptus grandis HOM05D005630 ORTHO05D006979 1.5e-12 76.3 49 71.4
HanXRQChr10g0314501 Helianthus annuus HOM05D005630 ORTHO05D006979 1.5e-12 76.3 49 65.3
PSO210G0346 Papaver somniferum HOM05D005630 ORTHO05D006979 2.0e-12 75.9 49 71.4
PSO210G6044 Papaver somniferum HOM05D005630 ORTHO05D006979 2.0e-12 75.9 49 71.4
SGA_v2.0_scaffold416G51224 Striga asiatica HOM05D005630 ORTHO05D006979 2.0e-12 75.9 49 71.4
Hma1.2p1_1164F.1_g262820 Hydrangea macrophylla HOM05D005630 ORTHO05D006979 2.6e-12 75.5 49 69.4
unitig_46.g18303 Utricularia gibba HOM05D005630 ORTHO05D006979 2.6e-12 75.5 49 67.3
VMungo0464G1592 Vigna mungo HOM05D005630 ORTHO05D006979 2.6e-12 75.5 49 65.3
CsaV3_3G004770 Cucumis sativus L. HOM05D005630 ORTHO05D006979 3.4e-12 75.1 49 71.4
Migut.J01281 Erythranthe guttata HOM05D005630 ORTHO05D006979 3.4e-12 75.1 49 65.3
Nitab4.5_0003965g0050 Nicotiana tabacum HOM05D005630 ORTHO05D006979 3.4e-12 75.1 49 67.3
Ciclev10009802m.g Citrus clementina HOM05D005630 ORTHO05D006979 4.5e-12 74.7 49 67.3
FAN26G1041 Fragaria x ananassa HOM05D005630 ORTHO05D006979 4.5e-12 74.7 49 67.3
COL.COLO4_35448 Corchorus olitorius HOM05D000321 ORTHO05D000204 5.8e-12 74.3 49 67.3
MBI07_g35858_MAGBIO Magnolia biondii HOM05D005630 ORTHO05D006979 5.8e-12 74.3 49 69.4
Oeu040774.1 Olea europaea HOM05D005630 ORTHO05D006979 1.0e-11 73.6 49 67.3
unitig_46.g18374 Utricularia gibba HOM05D005736 ORTHO05D007215 4.9e-11 71.2 49 63.3
EL10Ac4g09637 Beta vulgaris HOM05D005630 ORTHO05D006979 8.4e-11 70.5 49 63.3
CAN.G1465.11 Capsicum annuum HOM05D005630 ORTHO05D006979 8.4e-11 70.5 49 65.3
AUR62001080 Chenopodium quinoa HOM05D005630 ORTHO05D006979 8.4e-11 70.5 49 63.3
CDE02G3819 Ceratophyllum demersum HOM05D005630 ORTHO05D006979 1.1e-10 70.1 49 61.2
Nitab4.5_0005975g0020 Nicotiana tabacum HOM05D005630 ORTHO05D006979 1.4e-10 69.7 49 63.3
DCAR_019353 Daucus carota HOM05D000452 ORTHO05D000647 5.5e-10 67.8 49 61.2
HPP92_008634 Vanilla planifolia HOM05D005630 ORTHO05D006979 5.5e-10 67.8 49 55.1
Actinidia37787 Actinidia chinensis HOM05D005630 ORTHO05D006979 1.6e-09 66.2 43 72.1
Zm00001eb119770 Zea mays HOM05D005630 ORTHO05D006979 2.1e-09 65.9 48 62.5
MD16G1239100 Malus domestica HOM05D005630 ORTHO05D006979 2.7e-09 65.5 73 45.2
GSVIVG01001041001 Vitis vinifera HOM05D005630 ORTHO05D006979 6.0e-09 64.3 43 67.4
Os01g0220300 Oryza sativa ssp. japonica HOM05D005630 ORTHO05D006979 7.9e-09 63.9 49 59.2
AUR62004880 Chenopodium quinoa HOM05D005630 ORTHO05D006979 1.0e-08 63.5 49 57.1
SEGI_16423 Sequoiadendron giganteum HOM05D005630 ORTHO05D006979 6.2e-06 54.3 46 47.8


User provided reference genes

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