Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G10819 Trifolium pratense HOM05D005596 ORTHO05D006994 3.9e-69 264.6 129 100.0
Medtr1g101540 Medicago truncatula HOM05D005596 ORTHO05D006994 5.3e-58 227.6 122 89.3
Ca_10798_v3 Cicer arietinum L. HOM05D005596 ORTHO05D006994 6.5e-56 220.7 121 86.8
Glyma.10G239200 Glycine max HOM05D005596 ORTHO05D006994 6.1e-54 214.2 122 83.6
Lalb_Chr06g0160971 Lupinus albus HOM05D005596 ORTHO05D006994 8.2e-51 203.8 121 81.0
LjContig00238g0007789 Lotus japonicus HOM05D005596 ORTHO05D006994 4.1e-50 201.4 119 80.7
Phvul.007G066540 Phaseolus vulgaris HOM05D005596 ORTHO05D006994 7.0e-50 200.7 121 80.2
Cfa008276 Carpinus fangiana HOM05D005596 ORTHO05D006994 5.9e-49 197.6 116 82.8
Haze_13762 Corylus avellana HOM05D005596 ORTHO05D006994 1.7e-48 196.1 116 81.9
QL09p016060 Quercus lobata HOM05D005596 ORTHO05D006994 1.7e-48 196.1 119 79.8
QL09p015812 Quercus lobata HOM05D005596 ORTHO05D006994 5.0e-48 194.5 119 79.0
Sabra12G0100700 Salix brachista HOM05D005596 ORTHO05D006994 8.5e-48 193.7 119 79.0
TWI39G0482 Tripterygium wilfordii HOM05D005596 ORTHO05D006994 4.2e-47 191.4 118 76.3
CiPaw.03G102200 Carya illinoinensis HOM05D005596 ORTHO05D006994 5.5e-47 191.0 122 77.0
Ciclev10005112m.g Citrus clementina HOM05D005596 ORTHO05D006994 6.1e-46 187.6 119 77.3
Potri.012G133900 Populus trichocarpa HOM05D005596 ORTHO05D006994 6.1e-46 187.6 119 79.0
Eucgr.K00221 Eucalyptus grandis HOM05D005596 ORTHO05D006994 3.0e-45 185.3 120 70.0
Thecc.03G170100 Theobroma cacao HOM05D005596 ORTHO05D006994 6.7e-45 184.1 120 72.5
Manes.06G143300 Manihot esculenta HOM05D005596 ORTHO05D006994 1.2e-44 183.3 118 73.7
GSVIVG01010628001 Vitis vinifera HOM05D005596 ORTHO05D006994 1.5e-44 183.0 118 73.7
Gohir.D09G040500 Gossypium hirsutum HOM05D005596 ORTHO05D006994 7.5e-44 180.6 115 73.9
Gorai.006G046300 Gossypium raimondii HOM05D005596 ORTHO05D006994 7.5e-44 180.6 115 73.9
Duzib205G1479 Durio zibethinus HOM05D005596 ORTHO05D006994 1.3e-43 179.9 118 71.2
CSS0004859 Camellia sinensis var. sinensis HOM05D005596 ORTHO05D006994 1.7e-43 179.5 119 73.1
FAN03G2823 Fragaria x ananassa HOM05D005596 ORTHO05D006994 1.7e-43 179.5 124 72.6
Hma1.2p1_0099F.1_g048580 Hydrangea macrophylla HOM05D005596 ORTHO05D006994 2.2e-43 179.1 121 71.9
Nn6g34264 Nelumbo nucifera HOM05D005596 ORTHO05D006994 2.2e-43 179.1 116 73.3
CSS0017210 Camellia sinensis var. sinensis HOM05D005596 ORTHO05D006994 2.8e-43 178.7 119 73.1
Gohir.A09G039400 Gossypium hirsutum HOM05D005596 ORTHO05D006994 2.8e-43 178.7 115 73.9
PGR142G4172 Punica granatum HOM05D005596 ORTHO05D006994 3.7e-43 178.3 119 71.4
PSO782G2992 Papaver somniferum HOM05D005596 ORTHO05D006994 4.8e-43 177.9 118 70.3
Atru.chr1.530 Acer truncatum HOM05D005596 ORTHO05D006994 6.3e-43 177.6 122 71.3
DCAR_018164 Daucus carota HOM05D005596 ORTHO05D006994 6.3e-43 177.6 115 72.2
FvH4_7g28970 Fragaria vesca HOM05D005596 ORTHO05D006994 6.3e-43 177.6 124 71.8
FAN06G1108 Fragaria x ananassa HOM05D005596 ORTHO05D006994 6.3e-43 177.6 124 71.8
FAN06G4254 Fragaria x ananassa HOM05D005596 ORTHO05D006994 6.3e-43 177.6 124 71.8
FAN10G2089 Fragaria x ananassa HOM05D005596 ORTHO05D006994 6.3e-43 177.6 124 71.8
FAN10G3222 Fragaria x ananassa HOM05D005596 ORTHO05D006994 6.3e-43 177.6 124 71.8
Lj8A29T43 Lonicera japonica HOM05D005596 ORTHO05D006994 6.3e-43 177.6 118 71.2
FAN03G1867 Fragaria x ananassa HOM05D005596 ORTHO05D006994 1.4e-42 176.4 124 71.0
CANSAT21G1758 Cannabis sativa HOM05D005596 ORTHO05D006994 1.8e-42 176.0 120 73.3
Carub.0008s1212 Capsella rubella HOM05D005596 ORTHO05D006994 1.8e-42 176.0 120 71.7
MELO3C006872.2 Cucumis melo HOM05D005596 ORTHO05D006994 1.8e-42 176.0 118 69.5
Eucgr.K00218 Eucalyptus grandis HOM05D005596 ORTHO05D006994 1.8e-42 176.0 120 70.0
Prupe.2G289700 Prunus persica HOM05D005596 ORTHO05D006994 1.8e-42 176.0 124 71.8
ECA233G5181 Erigeron canadensis HOM05D005596 ORTHO05D006994 2.4e-42 175.6 118 70.3
RcHm_v2.0_Chr1g0376671 Rosa chinensis HOM05D005596 ORTHO05D006994 2.4e-42 175.6 121 73.6
TAR375G0353 Trochodendron aralioides HOM05D005596 ORTHO05D006994 2.4e-42 175.6 116 71.6
PSO478G4610 Papaver somniferum HOM05D005596 ORTHO05D006994 3.1e-42 175.3 118 69.5
Rhsim03G0176700 Rhododendron simsii HOM05D005596 ORTHO05D006994 3.1e-42 175.3 120 72.5
FAN01G2242 Fragaria x ananassa HOM05D005596 ORTHO05D006994 4.1e-42 174.9 124 70.2
PGSC0003DMG400014264 Solanum tuberosum HOM05D005596 ORTHO05D006994 4.1e-42 174.9 115 71.3
Solyc03g026260.3 Solanum lycopersicum HOM05D005596 ORTHO05D006994 5.3e-42 174.5 115 71.3
Sopen03g005130 Solanum pennellii HOM05D005596 ORTHO05D006994 5.3e-42 174.5 115 71.3
Actinidia28519 Actinidia chinensis HOM05D005596 ORTHO05D006994 7.0e-42 174.1 118 72.0
Actinidia34077 Actinidia chinensis HOM05D005596 ORTHO05D006994 7.0e-42 174.1 118 72.0
AT5G52030 Arabidopsis thaliana HOM05D005596 ORTHO05D006994 1.2e-41 173.3 120 69.2
CARHR264970 Cardamine hirsuta HOM05D005596 ORTHO05D006994 2.0e-41 172.6 120 70.0
CAN.G548.11 Capsicum annuum HOM05D005596 ORTHO05D006994 2.7e-41 172.2 115 69.6
vmacro06726 Vaccinium macrocarpon HOM05D005596 ORTHO05D006994 5.9e-41 171.0 120 70.0
vmacro06733 Vaccinium macrocarpon HOM05D005596 ORTHO05D006994 5.9e-41 171.0 120 70.0
Thhalv10013712m.g Eutrema salsugineum HOM05D005596 ORTHO05D006994 7.7e-41 170.6 118 69.5
Peaxi162Scf00648g00016 Petunia axillaris HOM05D005596 ORTHO05D006994 7.7e-41 170.6 117 69.2
AL8G26370 Arabidopsis lyrata HOM05D005596 ORTHO05D006994 1.3e-40 169.9 118 70.3
Migut.F00380 Erythranthe guttata HOM05D005596 ORTHO05D006994 1.3e-40 169.9 118 70.3
Aa31LG3G8420 Aethionema arabicum HOM05D005596 ORTHO05D006994 1.7e-40 169.5 117 70.1
BcaC03g14556 Brassica carinata HOM05D005596 ORTHO05D006994 1.7e-40 169.5 119 68.9
C02p20060 Brassica napus HOM05D005596 ORTHO05D006994 1.7e-40 169.5 119 68.9
Hund04701 Selenicereus undatus HOM05D005596 ORTHO05D006994 1.7e-40 169.5 121 65.3
arahy.Tifrunner.gnm1.ann1.8H8JUA Arachis hypogaea HOM05D005596 ORTHO05D006994 2.2e-40 169.1 126 69.0
BcaB05g23951 Brassica carinata HOM05D005596 ORTHO05D006994 2.2e-40 169.1 120 68.3
MD01G1196400 Malus domestica HOM05D005596 ORTHO05D006994 2.2e-40 169.1 123 69.9
BolC2t08136H Brassica oleracea HOM05D005596 ORTHO05D006994 2.9e-40 168.7 119 68.9
A02p12010 Brassica napus HOM05D005596 ORTHO05D006994 3.8e-40 168.3 120 67.5
BraA02t06264Z Brassica rapa HOM05D005596 ORTHO05D006994 3.8e-40 168.3 120 67.5
Oeu022544.2 Olea europaea HOM05D005596 ORTHO05D006994 6.5e-40 167.5 118 68.6
Lsat_1_v5_gn_8_7641 Lactuca sativa HOM05D005596 ORTHO05D006994 8.5e-40 167.2 122 64.8
AUR62021241 Chenopodium quinoa HOM05D005596 ORTHO05D006994 1.1e-39 166.8 118 66.9
EL10Ac3g05686 Beta vulgaris HOM05D005596 ORTHO05D006994 1.9e-39 166.0 114 68.4
HanXRQChr13g0405601 Helianthus annuus HOM05D005596 ORTHO05D006994 1.9e-39 166.0 118 67.8
Cc02_g03410 Coffea canephora HOM05D005596 ORTHO05D006994 2.5e-39 165.6 118 66.9
MBI12_g25031_MAGBIO Magnolia biondii HOM05D005596 ORTHO05D006994 2.5e-39 165.6 110 70.0
MELO3C031206.2 Cucumis melo HOM05D005596 ORTHO05D006994 3.2e-39 165.2 117 67.5
Cpa.g.sc107.2 Carica papaya HOM05D005596 ORTHO05D006994 4.2e-39 164.9 109 73.4
Sp6g14270 Schrenkiella parvula HOM05D005596 ORTHO05D006994 5.5e-39 164.5 119 67.2
Sed0010012 Sechium edule HOM05D005596 ORTHO05D006994 5.5e-39 164.5 110 70.9
SGA_v2.0_scaffold2G01084 Striga asiatica HOM05D005596 ORTHO05D006994 7.2e-39 164.1 116 69.8
MSTRG.8768 Avicennia marina HOM05D005596 ORTHO05D006994 2.7e-38 162.2 121 63.6
EL10Ac5g12249 Beta vulgaris HOM05D005596 ORTHO05D006994 3.6e-38 161.8 118 64.4
ClCG05G007790 Citrullus lanatus HOM05D005596 ORTHO05D006994 3.6e-38 161.8 110 70.0
AUR62016035 Chenopodium quinoa HOM05D005596 ORTHO05D006994 4.7e-38 161.4 118 64.4
THA.LOC104811480 Tarenaya hassleriana HOM05D005596 ORTHO05D006994 4.7e-38 161.4 116 66.4
SalBow4G2853 Salvia bowleyana HOM05D005596 ORTHO05D006994 6.1e-38 161.0 112 69.6
Sc25g0000360 Simmondsia chinensis HOM05D005596 ORTHO05D006994 2.0e-36 156.0 118 65.3
Nitab4.5_0001083g0020 Nicotiana tabacum HOM05D005596 ORTHO05D006994 7.5e-36 154.1 117 62.4
arahy.Tifrunner.gnm1.ann1.EY18QM Arachis hypogaea HOM05D005596 ORTHO05D006994 9.8e-36 153.7 117 66.7
Os08g0545700 Oryza sativa ssp. japonica HOM05D005596 ORTHO05D006994 2.2e-35 152.5 105 69.5
ATR0757G105 Amborella trichopoda HOM05D005596 ORTHO05D006994 3.7e-35 151.8 122 62.3
HPP92_020336 Vanilla planifolia HOM05D005596 ORTHO05D006994 4.8e-35 151.4 113 61.9
Nitab4.5_0002394g0030 Nicotiana tabacum HOM05D005596 ORTHO05D006994 1.1e-34 150.2 117 62.4
Zm00001eb037540 Zea mays HOM05D005596 ORTHO05D006994 1.4e-34 149.8 105 67.6
unitig_0.g2489 Utricularia gibba HOM05D005596 ORTHO05D006994 2.7e-33 145.6 121 59.5
Glyma.20G155300 Glycine max HOM05D005596 ORTHO05D006994 1.0e-29 133.7 73 84.9
CsaV3_3G016780 Cucumis sativus L. HOM05D005596 ORTHO05D006994 3.4e-28 128.6 80 75.0
CiPaw.01G039000 Carya illinoinensis HOM05D005596 ORTHO05D006994 2.8e-27 125.6 79 78.5
Aqoxy7G00456 Aquilegia oxysepala HOM05D005596 ORTHO05D006994 3.7e-27 125.2 82 69.5
Pp3c25_14680 Physcomitrium patens HOM05D005596 ORTHO05D006994 1.8e-26 122.9 117 51.3
VMungo0720G0093 Vigna mungo HOM05D005596 ORTHO05D006994 3.1e-26 122.1 74 81.1
Actinidia32899 Actinidia chinensis HOM05D005596 ORTHO05D006994 5.4e-26 121.3 82 69.5
MELO3C004678.2 Cucumis melo HOM05D005596 ORTHO05D006994 5.4e-26 121.3 80 72.5
MELO3C035596.2 Cucumis melo HOM05D005596 ORTHO05D006994 1.7e-24 116.3 117 53.0
Mapoly0043s0066 Marchantia polymorpha HOM05D005596 ORTHO05D006994 1.7e-24 116.3 111 50.5
CBR_g7940 Chara braunii HOM05D000019 ORTHO05D000048 4.3e-23 111.7 119 51.3
Cre16.g677800 Chlamydomonas reinhardtii HOM05D005596 ORTHO05D006994 5.4e-18 94.7 87 57.5
PRCOL_00003000 Prasinoderma coloniale HOM05D005596 ORTHO05D006994 9.2e-18 94.0 82 56.1
Medtr4g088945 Medicago truncatula HOM05D000054 ORTHO05D259780 1.2e-17 93.6 52 88.5
AagrBONN_evm.TU.Sc2ySwM_344.2862 Anthoceros agrestis HOM05D005596 ORTHO05D006994 1.6e-14 83.2 82 51.2
MELO3C010054.2 Cucumis melo HOM05D005596 ORTHO05D006994 3.6e-14 82.0 59 59.3
Psat6g200160 Pisum sativum HOM05D005596 ORTHO05D006994 1.1e-10 70.5 43 81.4
CDE11G1004 Ceratophyllum demersum HOM05D005596 ORTHO05D006994 1.4e-10 70.1 45 75.6
MD07G1263300 Malus domestica HOM05D005596 ORTHO05D006994 3.0e-08 62.4 34 88.2


User provided reference genes

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