Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G10794 Trifolium pratense HOM05D007837 ORTHO05D009965 6.2e-94 347.4 174 100.0
Lj3g0012849 Lotus japonicus HOM05D007837 ORTHO05D009965 6.1e-65 251.1 194 68.0
Glyma.12G002600 Glycine max HOM05D007837 ORTHO05D009965 3.0e-64 248.8 189 69.3
Phvul.011G003300 Phaseolus vulgaris HOM05D007837 ORTHO05D009965 6.7e-64 247.7 195 68.2
VMungo1127G0844 Vigna mungo HOM05D007837 ORTHO05D009965 1.5e-63 246.5 194 66.5
Medtr4g035250 Medicago truncatula HOM05D007837 ORTHO05D009965 1.2e-49 200.3 140 72.1
Cpa.g.sc192.12 Carica papaya HOM05D007837 ORTHO05D009965 1.1e-47 193.7 193 52.8
Atru.chr10.652 Acer truncatum HOM05D007837 ORTHO05D009965 2.2e-46 189.5 183 55.7
CSS0012057 Camellia sinensis var. sinensis HOM05D007837 ORTHO05D009965 4.1e-45 185.3 191 51.8
Dinv15942 Davidia involucrata HOM05D007837 ORTHO05D009965 3.5e-44 182.2 188 52.7
Gohir.A05G113000 Gossypium hirsutum HOM05D007837 ORTHO05D009965 7.7e-44 181.0 179 53.1
Gorai.009G117500 Gossypium raimondii HOM05D007837 ORTHO05D009965 1.0e-43 180.6 179 52.5
Potri.011G153800 Populus trichocarpa HOM05D007837 ORTHO05D009965 1.0e-43 180.6 134 64.2
Manes.16G061400 Manihot esculenta HOM05D007837 ORTHO05D009965 2.9e-43 179.1 134 60.4
Gohir.D05G113500 Gossypium hirsutum HOM05D007837 ORTHO05D009965 6.5e-43 177.9 179 52.5
Actinidia33640 Actinidia chinensis HOM05D007837 ORTHO05D009965 8.5e-43 177.6 134 61.9
CsaV3_6G053020 Cucumis sativus L. HOM05D007837 ORTHO05D009965 1.9e-42 176.4 190 46.8
FAN16G2143 Fragaria x ananassa HOM05D007837 ORTHO05D009965 7.2e-42 174.5 177 50.8
ClCG01G025810 Citrullus lanatus HOM05D007837 ORTHO05D009965 9.4e-42 174.1 190 47.9
TWI15G0587 Tripterygium wilfordii HOM05D007837 ORTHO05D009965 9.4e-42 174.1 193 50.8
FvH4_3g11620 Fragaria vesca HOM05D007837 ORTHO05D009965 1.2e-41 173.7 177 50.3
FAN21G3089 Fragaria x ananassa HOM05D007837 ORTHO05D009965 1.6e-41 173.3 177 50.3
Lj1A1155T50 Lonicera japonica HOM05D007837 ORTHO05D009965 2.1e-41 172.9 160 56.2
MD10G1240200 Malus domestica HOM05D007837 ORTHO05D009965 2.1e-41 172.9 132 63.6
Dinv06743 Davidia involucrata HOM05D007837 ORTHO05D009965 3.6e-41 172.2 193 50.3
FAN25G3065 Fragaria x ananassa HOM05D007837 ORTHO05D009965 3.6e-41 172.2 181 50.3
MELO3C007007.2 Cucumis melo HOM05D007837 ORTHO05D009965 6.1e-41 171.4 190 46.3
Ciclev10017939m.g Citrus clementina HOM05D007837 ORTHO05D009965 8.0e-41 171.0 138 58.7
RcHm_v2.0_Chr5g0018641 Rosa chinensis HOM05D007837 ORTHO05D009965 1.0e-40 170.6 177 50.3
Duzib160G0902 Durio zibethinus HOM05D007837 ORTHO05D009965 1.8e-40 169.9 133 60.9
arahy.Tifrunner.gnm1.ann1.SA9RL2 Arachis hypogaea HOM05D007837 ORTHO05D009965 3.0e-40 169.1 130 66.9
Psat7g145400 Pisum sativum HOM05D007837 ORTHO05D009965 3.0e-40 169.1 90 90.0
Prupe.4G103700 Prunus persica HOM05D007837 ORTHO05D009965 3.0e-40 169.1 172 51.7
Thecc.06G015600 Theobroma cacao HOM05D007837 ORTHO05D009965 3.0e-40 169.1 155 55.5
Migut.M01930 Erythranthe guttata HOM05D007837 ORTHO05D009965 4.0e-40 168.7 158 55.7
TAR626G0822 Trochodendron aralioides HOM05D007837 ORTHO05D009965 4.0e-40 168.7 134 60.4
COL.COLO4_22875 Corchorus olitorius HOM05D007837 ORTHO05D009965 5.2e-40 168.3 168 51.8
MD05G1261900 Malus domestica HOM05D007837 ORTHO05D009965 1.5e-39 166.8 132 61.4
DCAR_001340 Daucus carota HOM05D007837 ORTHO05D009965 2.6e-39 166.0 152 53.3
Oeu008970.1 Olea europaea HOM05D007837 ORTHO05D009965 1.7e-38 163.3 150 54.7
Sed0012016 Sechium edule HOM05D007837 ORTHO05D009965 1.7e-38 163.3 180 48.9
Nitab4.5_0001219g0090 Nicotiana tabacum HOM05D007837 ORTHO05D009965 2.2e-38 162.9 156 51.9
Nitab4.5_0011721g0030 Nicotiana tabacum HOM05D007837 ORTHO05D009965 2.8e-38 162.5 133 56.4
Cc09_g07320 Coffea canephora HOM05D007837 ORTHO05D009965 6.3e-38 161.4 134 55.2
CANSAT35G1648 Cannabis sativa HOM05D007837 ORTHO05D009965 2.4e-37 159.5 134 55.2
Solyc02g069550.1 Solanum lycopersicum HOM05D007837 ORTHO05D009965 3.1e-37 159.1 157 51.0
PGR042G0413 Punica granatum HOM05D007837 ORTHO05D009965 4.1e-37 158.7 134 56.0
Sopen02g018680 Solanum pennellii HOM05D007837 ORTHO05D009965 5.3e-37 158.3 133 55.6
TAR633G0058 Trochodendron aralioides HOM05D007837 ORTHO05D009965 1.2e-36 157.1 134 58.2
PSO541G2349 Papaver somniferum HOM05D007837 ORTHO05D009965 2.0e-36 156.4 155 50.3
Aqoxy3G03542 Aquilegia oxysepala HOM05D007837 ORTHO05D009965 2.7e-36 156.0 139 58.3
PSO675G4978 Papaver somniferum HOM05D007837 ORTHO05D009965 1.7e-35 153.3 155 49.0
Peaxi162Scf00195g00413 Petunia axillaris HOM05D007837 ORTHO05D009965 6.5e-35 151.4 149 52.3
Lsat_1_v5_gn_1_90680 Lactuca sativa HOM05D007837 ORTHO05D001664 2.7e-33 146.0 134 56.0
SalBow8G2294 Salvia bowleyana HOM05D007837 ORTHO05D009965 4.7e-33 145.2 134 53.0
SalBow8G2521 Salvia bowleyana HOM05D007837 ORTHO05D009965 4.7e-33 145.2 134 53.0
QL05p065337 Quercus lobata HOM05D007837 ORTHO05D009965 6.8e-32 141.4 133 54.1
Potri.001G443025 Populus trichocarpa HOM05D007837 ORTHO05D009965 5.9e-28 128.3 89 68.5
ATR1098G128 Amborella trichopoda HOM05D007837 ORTHO05D009965 2.3e-27 126.3 147 42.9
MBI18_g28215_MAGBIO Magnolia biondii HOM05D007837 ORTHO05D009965 2.5e-26 122.9 124 46.8
SEGI_16109 Sequoiadendron giganteum HOM05D007837 ORTHO05D009965 6.3e-22 108.2 124 45.2
Haze_05985 Corylus avellana HOM05D007837 ORTHO05D009965 7.3e-18 94.7 64 68.8
arahy.Tifrunner.gnm1.ann1.FUT705 Arachis hypogaea HOM05D007837 ORTHO05D009965 1.6e-17 93.6 59 76.3
Hma1.2p1_0410F.1_g147010 Hydrangea macrophylla HOM05D007837 ORTHO05D009965 5.2e-16 88.6 59 67.8
SMO118G0556 Selaginella moellendorffii HOM05D007837 ORTHO05D009965 4.9e-14 82.0 115 34.8
GSVIVG01037969001 Vitis vinifera HOM05D007837 ORTHO05D009965 4.9e-14 82.0 59 66.1
TAR626G1098 Trochodendron aralioides HOM05D001154 ORTHO05D010892 1.8e-13 80.1 95 49.5
AagrBONN_evm.TU.Sc2ySwM_228.3840 Anthoceros agrestis HOM05D007837 ORTHO05D009965 9.2e-13 77.8 113 34.5
Hma1.2p1_0410F.1_g147000 Hydrangea macrophylla HOM05D007837 ORTHO05D009965 9.2e-13 77.8 91 49.5
TAR365G1222 Trochodendron aralioides HOM05D001154 ORTHO05D010892 1.6e-12 77.0 95 48.4
TAR362G0005 Trochodendron aralioides HOM05D007837 ORTHO05D009965 2.3e-11 73.2 64 50.0


User provided reference genes

Program Settings