Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G10788 Trifolium pratense HOM05D000832 ORTHO05D051456 1.5e-34 149.1 78 100.0
Medtr1g094000 Medicago truncatula HOM05D000832 ORTHO05D000982 2.7e-33 144.8 76 98.7
Psat6g181480 Pisum sativum HOM05D000832 ORTHO05D000982 2.7e-33 144.8 76 98.7
Ca_10524_v3 Cicer arietinum L. HOM05D000832 ORTHO05D000982 1.0e-32 142.9 76 97.4
Lj5g0020451 Lotus japonicus HOM05D000832 ORTHO05D000982 8.8e-32 139.8 76 90.8
VMungo0720G2531 Vigna mungo HOM05D000832 ORTHO05D000982 3.4e-31 137.9 76 88.2
Lalb_Chr02g0151871 Lupinus albus HOM05D000832 ORTHO05D000982 7.5e-31 136.7 76 89.5
Phvul.007G101300 Phaseolus vulgaris HOM05D000832 ORTHO05D000982 9.8e-31 136.3 76 88.2
Glyma.10G205500 Glycine max HOM05D000832 ORTHO05D000982 1.7e-30 135.6 76 86.8
arahy.Tifrunner.gnm1.ann1.3YC2HT Arachis hypogaea HOM05D000832 ORTHO05D000982 3.1e-29 131.3 76 85.5
PGR102G0673 Punica granatum HOM05D000832 ORTHO05D000982 1.6e-28 129.0 76 82.9
Atru.chr11.1403 Acer truncatum HOM05D000832 ORTHO05D000982 2.0e-28 128.6 76 81.6
Ciclev10030580m.g Citrus clementina HOM05D000832 ORTHO05D000982 2.0e-28 128.6 76 82.9
MD16G1050300 Malus domestica HOM05D000832 ORTHO05D000982 2.0e-28 128.6 76 81.6
Sabra08G0086500 Salix brachista HOM05D000832 ORTHO05D000982 2.0e-28 128.6 76 84.2
AL1G39660 Arabidopsis lyrata HOM05D000832 ORTHO05D000982 5.9e-28 127.1 76 81.6
Carub.0001s2485 Capsella rubella HOM05D000832 ORTHO05D000982 5.9e-28 127.1 76 81.6
Migut.E00286 Erythranthe guttata HOM05D000832 ORTHO05D000982 5.9e-28 127.1 76 82.9
Thhalv10006672m.g Eutrema salsugineum HOM05D000832 ORTHO05D000982 5.9e-28 127.1 76 81.6
CARHR025810 Cardamine hirsuta HOM05D000832 ORTHO05D000982 7.7e-28 126.7 76 81.6
Manes.14G095900 Manihot esculenta HOM05D000832 ORTHO05D000982 7.7e-28 126.7 76 81.6
TWI31G0281 Tripterygium wilfordii HOM05D000832 ORTHO05D000982 7.7e-28 126.7 76 81.6
Manes.06G074600 Manihot esculenta HOM05D000832 ORTHO05D000982 1.0e-27 126.3 76 80.3
TPR.G2687 Trifolium pratense HOM05D000832 ORTHO05D000982 1.0e-27 126.3 76 80.3
Sp1g22570 Schrenkiella parvula HOM05D000832 ORTHO05D000982 1.3e-27 125.9 76 80.3
Duzib248G1658 Durio zibethinus HOM05D000832 ORTHO05D000982 1.7e-27 125.6 76 77.6
Eucgr.B03067 Eucalyptus grandis HOM05D000832 ORTHO05D000982 1.7e-27 125.6 76 82.9
MD13G1049200 Malus domestica HOM05D000832 ORTHO05D000982 1.7e-27 125.6 76 80.3
Potri.010G131800 Populus trichocarpa HOM05D000832 ORTHO05D000982 1.7e-27 125.6 76 82.9
BcaC05g26646 Brassica carinata HOM05D000832 ORTHO05D000982 2.2e-27 125.2 76 80.3
A09p39680 Brassica napus HOM05D000832 ORTHO05D000982 2.2e-27 125.2 76 80.3
C05p24840 Brassica napus HOM05D000832 ORTHO05D000982 2.2e-27 125.2 76 80.3
BolC5t31213H Brassica oleracea HOM05D000832 ORTHO05D000982 2.2e-27 125.2 76 80.3
BraA09t39467Z Brassica rapa HOM05D000832 ORTHO05D000982 2.2e-27 125.2 76 80.3
CiPaw.05G116300 Carya illinoinensis HOM05D000832 ORTHO05D000982 2.2e-27 125.2 76 82.9
CiPaw.06G099100 Carya illinoinensis HOM05D000832 ORTHO05D000982 2.2e-27 125.2 76 80.3
Ca_05096_v3 Cicer arietinum L. HOM05D000832 ORTHO05D000982 2.2e-27 125.2 76 80.3
Potri.008G114200 Populus trichocarpa HOM05D000832 ORTHO05D000982 2.2e-27 125.2 76 80.3
Cpa.g.sc1.237 Carica papaya HOM05D000832 ORTHO05D000982 2.9e-27 124.8 76 80.3
MBI16_g06572_MAGBIO Magnolia biondii HOM05D000832 ORTHO05D000982 3.8e-27 124.4 76 80.3
Actinidia14835 Actinidia chinensis HOM05D000832 ORTHO05D000982 5.0e-27 124.0 76 78.9
arahy.Tifrunner.gnm1.ann1.X6HICW Arachis hypogaea HOM05D000832 ORTHO05D000982 5.0e-27 124.0 76 80.3
Cfa008782 Carpinus fangiana HOM05D000832 ORTHO05D000982 5.0e-27 124.0 76 80.3
Haze_11794 Corylus avellana HOM05D000832 ORTHO05D000982 5.0e-27 124.0 76 80.3
Glyma.01G091000 Glycine max HOM05D000832 ORTHO05D000982 5.0e-27 124.0 76 80.3
Medtr0002s0890 Medicago truncatula HOM05D000832 ORTHO05D000982 5.0e-27 124.0 76 78.9
Rhsim09G0114100 Rhododendron simsii HOM05D000832 ORTHO05D000982 5.0e-27 124.0 76 76.3
arahy.Tifrunner.gnm1.ann1.WRC151 Arachis hypogaea HOM05D000832 ORTHO05D000982 6.5e-27 123.6 76 80.3
CSS0027131 Camellia sinensis var. sinensis HOM05D000832 ORTHO05D000982 6.5e-27 123.6 76 77.6
Psat2g088840 Pisum sativum HOM05D000832 ORTHO05D000982 6.5e-27 123.6 76 80.3
Prupe.1G302700 Prunus persica HOM05D000832 ORTHO05D000982 6.5e-27 123.6 76 78.9
TAR622G0475 Trochodendron aralioides HOM05D000832 ORTHO05D000982 8.5e-27 123.2 76 78.9
TAR702G0001 Trochodendron aralioides HOM05D000832 ORTHO05D000982 8.5e-27 123.2 76 78.9
vmacro10512 Vaccinium macrocarpon HOM05D000832 ORTHO05D000982 8.5e-27 123.2 76 75.0
MSTRG.2271 Avicennia marina HOM05D000832 ORTHO05D000982 1.1e-26 122.9 76 78.9
CSS0044860 Camellia sinensis var. sinensis HOM05D000832 ORTHO05D000982 1.1e-26 122.9 76 77.6
Hma1.2p1_0406F.1_g145940 Hydrangea macrophylla HOM05D000832 ORTHO05D000982 1.1e-26 122.9 76 78.9
TAR371G0210 Trochodendron aralioides HOM05D000832 ORTHO05D000982 1.1e-26 122.9 76 77.6
PSO478G2608 Papaver somniferum HOM05D000832 ORTHO05D000982 1.5e-26 122.5 76 78.9
SHI24310 Sapria himalayana HOM05D000832 ORTHO05D000982 1.5e-26 122.5 76 78.9
Dinv16529 Davidia involucrata HOM05D000832 ORTHO05D000982 1.9e-26 122.1 76 78.9
Dinv05809 Davidia involucrata HOM05D000832 ORTHO05D000982 2.5e-26 121.7 76 77.6
HPP92_011592 Vanilla planifolia HOM05D000832 ORTHO05D000982 2.5e-26 121.7 76 76.3
COL.COLO4_07850 Corchorus olitorius HOM05D000832 ORTHO05D000982 3.2e-26 121.3 76 77.6
MBI10_g18304_MAGBIO Magnolia biondii HOM05D000832 ORTHO05D000982 3.2e-26 121.3 76 76.3
Sabra10G0100500 Salix brachista HOM05D000832 ORTHO05D000982 3.2e-26 121.3 76 80.3
AL2G27680 Arabidopsis lyrata HOM05D000832 ORTHO05D000982 4.2e-26 120.9 76 77.6
Glyma.02G130701 Glycine max HOM05D000832 ORTHO05D000982 4.2e-26 120.9 76 78.9
Peaxi162Scf00614g00038 Petunia axillaris HOM05D000832 ORTHO05D000982 4.2e-26 120.9 76 77.6
Phvul.003G024800 Phaseolus vulgaris HOM05D000832 ORTHO05D000982 4.2e-26 120.9 76 78.9
Aqoxy3G00432 Aquilegia oxysepala HOM05D000832 ORTHO05D000982 5.5e-26 120.6 76 77.6
VMungo1215G1721 Vigna mungo HOM05D000832 ORTHO05D000982 5.5e-26 120.6 76 77.6
Carub.0002s1530 Capsella rubella HOM05D000832 ORTHO05D000982 7.2e-26 120.2 76 76.3
Nn3g17670 Nelumbo nucifera HOM05D000832 ORTHO05D000982 7.2e-26 120.2 76 76.3
Nitab4.5_0000221g0050 Nicotiana tabacum HOM05D000832 ORTHO05D000982 7.2e-26 120.2 76 76.3
Nitab4.5_0003669g0010 Nicotiana tabacum HOM05D000832 ORTHO05D000982 7.2e-26 120.2 76 76.3
Thecc.02G363600 Theobroma cacao HOM05D000832 ORTHO05D000982 7.2e-26 120.2 76 75.0
unitig_27.g25233 Utricularia gibba HOM05D000832 ORTHO05D051456 7.2e-26 120.2 76 76.3
THA.LOC104808410 Tarenaya hassleriana HOM05D000832 ORTHO05D000982 9.4e-26 119.8 76 73.7
Cc11_g10810 Coffea canephora HOM05D000832 ORTHO05D000982 1.2e-25 119.4 76 76.3
Peaxi162Scf00369g00124 Petunia axillaris HOM05D000832 ORTHO05D000982 1.2e-25 119.4 76 76.3
AT1G68750 Arabidopsis thaliana HOM05D000832 ORTHO05D000982 3.6e-25 117.9 76 75.0
Lj6A768T59 Lonicera japonica HOM05D000832 ORTHO05D000982 3.6e-25 117.9 76 76.3
Sc04g0006860 Simmondsia chinensis HOM05D000832 ORTHO05D000982 3.6e-25 117.9 76 73.7
CAN.G44.11 Capsicum annuum HOM05D000832 ORTHO05D000982 4.7e-25 117.5 76 75.0
Lj2g0012347 Lotus japonicus HOM05D000832 ORTHO05D000982 4.7e-25 117.5 76 78.9
PGSC0003DMG400007466 Solanum tuberosum HOM05D000832 ORTHO05D000982 4.7e-25 117.5 76 75.0
ATR0598G239 Amborella trichopoda HOM05D000832 ORTHO05D000982 6.1e-25 117.1 76 72.4
EL10Ac6g14528 Beta vulgaris HOM05D000832 ORTHO05D000982 6.1e-25 117.1 76 73.7
Gohir.A12G172900 Gossypium hirsutum HOM05D000832 ORTHO05D000982 6.1e-25 117.1 76 73.7
Gohir.D12G175500 Gossypium hirsutum HOM05D000832 ORTHO05D000982 6.1e-25 117.1 76 73.7
Gorai.008G187900 Gossypium raimondii HOM05D000832 ORTHO05D000982 6.1e-25 117.1 76 73.7
SGA_v2.0_scaffold14G06799 Striga asiatica HOM05D000832 ORTHO05D000982 8.0e-25 116.7 76 73.7
ECA233G3801 Erigeron canadensis HOM05D000832 ORTHO05D000982 1.0e-24 116.3 76 72.4
ECA234G2274 Erigeron canadensis HOM05D000832 ORTHO05D000982 1.0e-24 116.3 76 75.0
QL03p045000 Quercus lobata HOM05D000832 ORTHO05D000982 1.0e-24 116.3 76 77.6
CARHR061570 Cardamine hirsuta HOM05D000832 ORTHO05D000982 1.4e-24 115.9 76 73.7
AUR62002943 Chenopodium quinoa HOM05D000832 ORTHO05D000982 1.4e-24 115.9 76 72.4
AUR62007752 Chenopodium quinoa HOM05D000832 ORTHO05D000982 1.4e-24 115.9 76 72.4
Lj3A1022G56 Lonicera japonica HOM05D000832 ORTHO05D000982 1.8e-24 115.5 76 72.4
Nn4g23672 Nelumbo nucifera HOM05D000832 ORTHO05D000982 3.0e-24 114.8 76 73.7
Lsat_1_v5_gn_8_38141 Lactuca sativa HOM05D000832 ORTHO05D000982 4.0e-24 114.4 76 69.7
RcHm_v2.0_Chr4g0436201 Rosa chinensis HOM05D000832 ORTHO05D000982 4.0e-24 114.4 76 75.0
DCAR_030097 Daucus carota HOM05D000832 ORTHO05D000982 6.8e-24 113.6 76 71.1
Solyc04g006970.4 Solanum lycopersicum HOM05D000832 ORTHO05D000982 6.8e-24 113.6 76 72.4
Sopen04g002020 Solanum pennellii HOM05D000832 ORTHO05D000982 6.8e-24 113.6 76 72.4
A07p31800 Brassica napus HOM05D000832 ORTHO05D000982 8.8e-24 113.2 76 71.1
C06p37340 Brassica napus HOM05D000832 ORTHO05D000982 8.8e-24 113.2 76 71.1
BraA07t30807Z Brassica rapa HOM05D000832 ORTHO05D000982 8.8e-24 113.2 76 71.1
Sp5g23860 Schrenkiella parvula HOM05D000832 ORTHO05D000982 8.8e-24 113.2 76 71.1
Aqoxy3G03861 Aquilegia oxysepala HOM05D000832 ORTHO05D000982 1.5e-23 112.5 76 72.4
BolC6t38836H Brassica oleracea HOM05D000832 ORTHO05D000982 2.0e-23 112.1 76 71.1
HanXRQChr17g0568111 Helianthus annuus HOM05D000832 ORTHO05D000982 3.4e-23 111.3 76 69.7
CsaV3_5G028880 Cucumis sativus L. HOM05D000832 ORTHO05D000982 4.4e-23 110.9 76 73.7
Ah.02g127340 Amaranthus hybridus HOM05D000832 ORTHO05D000982 1.3e-22 109.4 76 68.4
HanXRQChr08g0214471 Helianthus annuus HOM05D000832 ORTHO05D000982 1.7e-22 109.0 76 67.1
Os01g0110700 Oryza sativa ssp. japonica HOM05D000832 ORTHO05D000982 2.2e-22 108.6 76 68.4
Thhalv10018058m.g Eutrema salsugineum HOM05D000832 ORTHO05D000982 3.7e-22 107.8 76 68.4
Zm00001eb126420 Zea mays HOM05D000832 ORTHO05D000982 3.7e-22 107.8 76 68.4
Hund05778 Selenicereus undatus HOM05D000832 ORTHO05D000982 4.9e-22 107.5 76 68.4
ClCG01G005810 Citrullus lanatus HOM05D000832 ORTHO05D000982 6.3e-22 107.1 76 71.1
MELO3C005348.2 Cucumis melo HOM05D000832 ORTHO05D000982 6.3e-22 107.1 76 71.1
FvH4_4g28350 Fragaria vesca HOM05D000832 ORTHO05D000982 8.3e-22 106.7 77 75.3
FAN12G1340 Fragaria x ananassa HOM05D000832 ORTHO05D000982 8.3e-22 106.7 77 75.3
FAN07G1155 Fragaria x ananassa HOM05D000832 ORTHO05D000982 1.1e-21 106.3 77 74.0
FAN22G0367 Fragaria x ananassa HOM05D000832 ORTHO05D000982 1.1e-21 106.3 77 74.0
Sed0007358 Sechium edule HOM05D000832 ORTHO05D000982 1.4e-21 105.9 76 71.1
SEGI_10409 Sequoiadendron giganteum HOM05D000832 ORTHO05D000982 1.8e-21 105.5 76 65.8
SMO146G0010 Selaginella moellendorffii HOM05D000832 ORTHO05D000982 3.1e-21 104.8 76 65.8
Mapoly0033s0016 Marchantia polymorpha HOM05D000832 ORTHO05D000982 1.6e-20 102.4 76 64.5
SMO239G0149 Selaginella moellendorffii HOM05D000832 ORTHO05D000982 3.8e-19 97.8 76 59.2
Cre03.g171950 Chlamydomonas reinhardtii HOM05D000832 ORTHO05D000982 3.4e-15 84.7 76 51.3
CBR_g51453 Chara braunii HOM05D000832 ORTHO05D000982 7.5e-15 83.6 65 61.5
FAN17G1376 Fragaria x ananassa HOM05D000832 ORTHO05D000982 1.2e-07 59.7 48 66.7
GSVIVG01011979001 Vitis vinifera HOM05D000832 ORTHO05D000982 3.7e-06 54.7 40 70.0


User provided reference genes

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