Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G10734 Trifolium pratense HOM05D000585 ORTHO05D001977 9.7e-82 307.4 237 100.0
Ca_26209_v3 Cicer arietinum L. HOM05D000585 ORTHO05D001977 3.5e-23 112.8 149 59.7
Medtr0019s0070 Medicago truncatula HOM05D000585 ORTHO05D001977 3.8e-17 92.8 149 71.8
Psat0s1157g0080 Pisum sativum HOM05D000585 ORTHO05D001977 8.4e-17 91.7 176 54.5
Glyma.16G196900 Glycine max HOM05D000585 ORTHO05D001977 1.5e-13 80.9 152 50.7
Phvul.004G120200 Phaseolus vulgaris HOM05D000585 ORTHO05D001977 1.8e-11 73.9 146 45.2
Lj2g0021683 Lotus japonicus HOM05D000585 ORTHO05D001977 3.1e-11 73.2 151 51.7
VMungo0464G0488 Vigna mungo HOM05D000585 ORTHO05D001977 4.0e-11 72.8 147 47.6
Glyma.09G143900 Glycine max HOM05D000585 ORTHO05D001977 2.6e-10 70.1 155 52.3
arahy.Tifrunner.gnm1.ann1.CN8H2Q Arachis hypogaea HOM05D000585 ORTHO05D001977 1.3e-09 67.8 150 52.0
TWI39G0130 Tripterygium wilfordii HOM05D000585 ORTHO05D001977 1.7e-09 67.4 153 47.1
arahy.Tifrunner.gnm1.ann1.Z6JTIR Arachis hypogaea HOM05D000585 ORTHO05D001977 2.2e-09 67.0 150 52.0
C03p03580 Brassica napus HOM05D000585 ORTHO05D001977 1.4e-08 64.3 152 45.4
BolC3t12898H Brassica oleracea HOM05D000585 ORTHO05D001977 1.4e-08 64.3 152 45.4
LjContig00238g0013087 Lotus japonicus HOM05D000585 ORTHO05D001977 1.9e-08 63.9 155 46.5
Manes.06G145000 Manihot esculenta HOM05D000585 ORTHO05D001977 2.4e-08 63.5 154 47.4
CANSAT21G1615 Cannabis sativa HOM05D000585 ORTHO05D001977 3.2e-08 63.2 150 46.0
CANSAT21G2530 Cannabis sativa HOM05D000585 ORTHO05D001977 3.2e-08 63.2 150 46.0
AT5G62070 Arabidopsis thaliana HOM05D000585 ORTHO05D001977 5.4e-08 62.4 157 40.8
Carub.0008s2275 Capsella rubella HOM05D000585 ORTHO05D001977 9.3e-08 61.6 155 38.7
AL8G38850 Arabidopsis lyrata HOM05D000585 ORTHO05D001977 2.1e-07 60.5 159 40.9
Gohir.A03G017800 Gossypium hirsutum HOM05D000585 ORTHO05D001977 2.1e-07 60.5 164 42.7
Medtr1g101330 Medicago truncatula HOM05D000585 ORTHO05D001977 2.7e-07 60.1 162 42.6
Lalb_Chr21g0304971 Lupinus albus HOM05D000585 ORTHO05D001977 6.0e-07 58.9 148 37.2
Atru.chr1.508 Acer truncatum HOM05D000585 ORTHO05D001977 7.9e-07 58.5 54 64.8
CARHR275860 Cardamine hirsuta HOM05D000585 ORTHO05D001977 7.9e-07 58.5 152 43.4
Sc19g0000030 Simmondsia chinensis HOM05D000585 ORTHO05D001977 7.9e-07 58.5 56 62.5
Sc19g0001650 Simmondsia chinensis HOM05D000585 ORTHO05D001977 7.9e-07 58.5 56 62.5
Aa31LG11G1460 Aethionema arabicum HOM05D000585 ORTHO05D001977 1.0e-06 58.2 150 45.3
Ah.13g068390 Amaranthus hybridus HOM05D000585 ORTHO05D001977 1.3e-06 57.8 56 62.5
A06p28770 Brassica napus HOM05D000585 ORTHO05D001977 1.7e-06 57.4 52 71.2
AUR62016017 Chenopodium quinoa HOM05D000585 ORTHO05D001977 1.7e-06 57.4 58 63.8
AUR62021222 Chenopodium quinoa HOM05D000585 ORTHO05D001977 1.7e-06 57.4 58 63.8
TPR.G17390 Trifolium pratense HOM05D000585 ORTHO05D001977 1.7e-06 57.4 173 37.0
Psat6g199200 Pisum sativum HOM05D000585 ORTHO05D001977 2.3e-06 57.0 153 42.5
MSTRG.8756 Avicennia marina HOM05D000585 ORTHO05D001977 3.0e-06 56.6 56 57.1
BcaC06g32459 Brassica carinata HOM05D000585 ORTHO05D001977 3.0e-06 56.6 154 46.8
A03p03160 Brassica napus HOM05D000585 ORTHO05D001977 3.0e-06 56.6 146 43.8
BraA03t09672Z Brassica rapa HOM05D000585 ORTHO05D001977 3.0e-06 56.6 146 43.8
Ciclev10004956m.g Citrus clementina HOM05D000585 ORTHO05D001977 3.0e-06 56.6 155 60.6
Aa31LG3G19130 Aethionema arabicum HOM05D000585 ORTHO05D001977 3.9e-06 56.2 159 42.1
Ah.07g207400 Amaranthus hybridus HOM05D000585 ORTHO05D001977 3.9e-06 56.2 56 58.9
Potri.012G139800 Populus trichocarpa HOM05D000585 ORTHO05D001977 5.1e-06 55.8 57 61.4
Hund04718 Selenicereus undatus HOM05D000585 ORTHO05D001977 5.1e-06 55.8 53 64.2
EL10Ac3g05721 Beta vulgaris HOM05D000585 ORTHO05D001977 6.6e-06 55.5 57 59.6
Gohir.D03G153800 Gossypium hirsutum HOM05D000585 ORTHO05D001977 6.6e-06 55.5 164 40.9
C03p64880 Brassica napus HOM05D000585 ORTHO05D001977 8.7e-06 55.1 146 49.3
MELO3C006884.2 Cucumis melo HOM05D000585 ORTHO05D001977 8.7e-06 55.1 147 41.5
Migut.F00364 Erythranthe guttata HOM05D000585 ORTHO05D001977 8.7e-06 55.1 59 55.9
SalBow2G2072 Salvia bowleyana HOM05D000585 ORTHO05D001977 8.7e-06 55.1 56 57.1


User provided reference genes

Program Settings