Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G10665 Trifolium pratense HOM05D008269 ORTHO05D010153 2.0e-62 242.7 165 100.0
Medtr6g060660 Medicago truncatula HOM05D008269 ORTHO05D010153 6.9e-34 147.9 169 68.0
Psat1g109760 Pisum sativum HOM05D008269 ORTHO05D010153 1.2e-25 120.6 168 64.9
VMungo0464G1635 Vigna mungo HOM05D008269 ORTHO05D010153 4.2e-23 112.1 162 50.6
Phvul.004G127400 Phaseolus vulgaris HOM05D008269 ORTHO05D010153 7.1e-23 111.3 156 51.3
Glyma.16G204500 Glycine max HOM05D008269 ORTHO05D010153 7.4e-20 101.3 154 53.9
Lalb_Chr19g0131321 Lupinus albus HOM05D008269 ORTHO05D010153 4.0e-18 95.5 157 56.7
Lalb_Chr01g0008831 Lupinus albus HOM05D008269 ORTHO05D010153 2.4e-15 86.3 149 44.3
Glyma.09G153700 Glycine max HOM05D008269 ORTHO05D010153 7.1e-15 84.7 159 51.6
Lalb_Chr03g0033111 Lupinus albus HOM05D008269 ORTHO05D010153 3.5e-14 82.4 152 48.0
Lj2g0014899 Lotus japonicus HOM05D008269 ORTHO05D010153 4.6e-14 82.0 163 44.8
QL02p008773 Quercus lobata HOM05D008269 ORTHO05D010153 1.8e-13 80.1 157 43.3
FvH4_7g28161 Fragaria vesca HOM05D008269 ORTHO05D010153 2.5e-12 76.3 154 35.7
Phvul.007G111700 Phaseolus vulgaris HOM05D008269 ORTHO05D010153 4.3e-12 75.5 160 38.1
Cpa.g.sc3.272 Carica papaya HOM05D008269 ORTHO05D010153 6.2e-11 71.6 152 36.8
Haze_17962 Corylus avellana HOM05D008269 ORTHO05D010153 6.2e-11 71.6 150 44.7
RcHm_v2.0_Chr1g0375111 Rosa chinensis HOM05D008269 ORTHO05D010153 6.2e-11 71.6 156 33.3
CANSAT21G0510 Cannabis sativa HOM05D008269 ORTHO05D010153 1.1e-10 70.9 154 43.5
CiPaw.04G062800 Carya illinoinensis HOM05D008269 ORTHO05D010153 3.1e-10 69.3 150 36.7
Ciclev10006184m.g Citrus clementina HOM05D008269 ORTHO05D010153 4.0e-10 68.9 159 42.8
Prupe.2G282100 Prunus persica HOM05D008269 ORTHO05D010153 4.0e-10 68.9 157 33.1
Glyma.20G212300 Glycine max HOM05D008269 ORTHO05D010153 5.3e-10 68.6 169 35.5
Prupe.2G282200 Prunus persica HOM05D008269 ORTHO05D010153 9.0e-10 67.8 156 49.4
Glyma.10G177800 Glycine max HOM05D008269 ORTHO05D010153 2.0e-09 66.6 170 35.3
Cfa018156 Carpinus fangiana HOM05D008269 ORTHO05D010153 2.6e-09 66.2 152 43.4
Thecc.03G161400 Theobroma cacao HOM05D008269 ORTHO05D010153 5.8e-09 65.1 150 36.7
Sabra12G0097300 Salix brachista HOM05D008269 ORTHO05D010153 1.3e-08 63.9 154 44.2
Manes.06G137900 Manihot esculenta HOM05D008269 ORTHO05D010153 2.9e-08 62.8 153 34.6
Atru.chr1.636 Acer truncatum HOM05D008269 ORTHO05D010153 3.8e-08 62.4 160 45.6
Duzib084G0789 Durio zibethinus HOM05D008269 ORTHO05D010153 1.1e-07 60.8 150 33.3
Manes.02G153600 Manihot esculenta HOM05D008269 ORTHO05D010153 1.1e-07 60.8 145 35.2
VMungo0720G1499 Vigna mungo HOM05D008269 ORTHO05D010153 1.1e-07 60.8 163 36.8
CiPaw.03G096800 Carya illinoinensis HOM05D008269 ORTHO05D010153 1.9e-07 60.1 150 35.3
Atru.chr1.635 Acer truncatum HOM05D008269 ORTHO05D010153 2.5e-07 59.7 163 43.6
Potri.015G131300 Populus trichocarpa HOM05D008269 ORTHO05D010153 2.5e-07 59.7 149 34.9
FvH4_7g28170 Fragaria vesca HOM05D008269 ORTHO05D010153 5.5e-07 58.5 150 40.0
RcHm_v2.0_Chr1g0375121 Rosa chinensis HOM05D008269 ORTHO05D010153 5.5e-07 58.5 152 32.2
FAN10G2987 Fragaria x ananassa HOM05D008269 ORTHO05D010153 7.1e-07 58.2 145 31.7
Nn1g01219 Nelumbo nucifera HOM05D008269 ORTHO05D010153 7.1e-07 58.2 151 32.5
Eucgr.K03334 Eucalyptus grandis HOM05D008269 ORTHO05D010153 1.6e-06 57.0 156 35.3
PGR047G0001 Punica granatum HOM05D008269 ORTHO05D010153 2.7e-06 56.2 147 34.7
MELO3C005418.2 Cucumis melo HOM05D032672 ORTHO05D010153 3.5e-06 55.8 155 43.2
Potri.012G129400 Populus trichocarpa HOM05D008269 ORTHO05D010153 3.5e-06 55.8 146 42.5
Migut.F00432 Erythranthe guttata HOM05D008269 ORTHO05D010153 7.9e-06 54.7 154 37.0


User provided reference genes

Program Settings