Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G10653 Trifolium pratense HOM05D005831 ORTHO05D007007 8.7e-131 470.3 237 100.0
Medtr1g015390 Medicago truncatula HOM05D005831 ORTHO05D007007 5.1e-107 391.3 257 80.5
Phvul.001G039000 Phaseolus vulgaris HOM05D005831 ORTHO05D007007 1.8e-104 382.9 256 78.5
Glyma.14G099100 Glycine max HOM05D005831 ORTHO05D007007 6.9e-104 380.9 256 78.1
Glyma.17G225600 Glycine max HOM05D005831 ORTHO05D007007 9.0e-104 380.6 256 77.7
VMungo0647G0599 Vigna mungo HOM05D005831 ORTHO05D007007 4.5e-103 378.3 256 77.7
Lj5g0001901 Lotus japonicus HOM05D005831 ORTHO05D007007 4.3e-98 361.7 259 74.5
Lalb_Chr09g0334801 Lupinus albus HOM05D005831 ORTHO05D007007 1.0e-94 350.5 257 71.6
Duzib150G1275 Durio zibethinus HOM05D005831 ORTHO05D007007 9.7e-90 334.0 254 70.9
Thecc.09G062000 Theobroma cacao HOM05D005831 ORTHO05D007007 4.8e-89 331.6 260 70.0
COL.COLO4_21126 Corchorus olitorius HOM05D005831 ORTHO05D007007 1.5e-87 326.6 254 69.3
Cfa018014 Carpinus fangiana HOM05D005831 ORTHO05D007007 2.0e-87 326.2 262 66.4
QL04p096581 Quercus lobata HOM05D005831 ORTHO05D007007 5.9e-87 324.7 259 68.3
MD08G1070400 Malus domestica HOM05D005831 ORTHO05D007007 7.7e-87 324.3 262 66.0
FvH4_2g31140 Fragaria vesca HOM05D005831 ORTHO05D007007 2.9e-86 322.4 262 67.6
FAN24G1737 Fragaria x ananassa HOM05D005831 ORTHO05D007007 2.9e-86 322.4 262 67.6
CANSAT25G0005 Cannabis sativa HOM05D005831 ORTHO05D007007 1.9e-85 319.7 260 67.3
HanXRQChr12g0359011 Helianthus annuus HOM05D005831 ORTHO05D007007 1.9e-85 319.7 244 69.3
ECA234G1597 Erigeron canadensis HOM05D005831 ORTHO05D007007 2.5e-85 319.3 248 67.3
PGR004G2090 Punica granatum HOM05D005831 ORTHO05D007007 2.5e-85 319.3 239 70.3
CiPaw.15G092600 Carya illinoinensis HOM05D005831 ORTHO05D007007 3.2e-85 318.9 260 68.1
FAN15G1366 Fragaria x ananassa HOM05D005831 ORTHO05D007007 3.2e-85 318.9 223 74.4
Manes.03G052700 Manihot esculenta HOM05D005831 ORTHO05D007007 3.2e-85 318.9 262 65.6
MD15G1051800 Malus domestica HOM05D005831 ORTHO05D007007 4.2e-85 318.5 260 65.8
PGSC0003DMG400003758 Solanum tuberosum HOM05D005831 ORTHO05D007007 4.2e-85 318.5 259 65.6
Sopen04g034540 Solanum pennellii HOM05D005831 ORTHO05D007007 5.5e-85 318.2 259 66.0
Lsat_1_v5_gn_5_79500 Lactuca sativa HOM05D005831 ORTHO05D007007 7.2e-85 317.8 252 67.5
MBI19_g11845_MAGBIO Magnolia biondii HOM05D005831 ORTHO05D007007 9.4e-85 317.4 254 65.7
Prupe.1G405700 Prunus persica HOM05D005831 ORTHO05D007007 9.4e-85 317.4 265 65.7
RcHm_v2.0_Chr6g0311631 Rosa chinensis HOM05D005831 ORTHO05D007007 1.2e-84 317.0 250 68.0
Nitab4.5_0000446g0240 Nicotiana tabacum HOM05D005831 ORTHO05D007007 1.6e-84 316.6 246 67.1
Solyc04g080930.4 Solanum lycopersicum HOM05D005831 ORTHO05D007007 1.6e-84 316.6 259 65.6
Potri.006G222000 Populus trichocarpa HOM05D005831 ORTHO05D007007 2.1e-84 316.2 265 63.4
Hma1.2p1_0231F.1_g097400 Hydrangea macrophylla HOM05D005831 ORTHO05D007007 6.1e-84 314.7 263 66.2
Migut.A00086 Erythranthe guttata HOM05D005831 ORTHO05D007007 1.0e-83 313.9 240 67.1
GSVIVG01035453001 Vitis vinifera HOM05D005831 ORTHO05D007007 1.8e-83 313.2 253 67.2
Actinidia25695 Actinidia chinensis HOM05D005831 ORTHO05D007007 2.3e-83 312.8 259 63.7
Gorai.001G020700 Gossypium raimondii HOM05D005831 ORTHO05D007007 8.8e-83 310.8 259 66.8
CSS0021293 Camellia sinensis var. sinensis HOM05D005831 ORTHO05D007007 2.6e-82 309.3 259 62.9
CAN.G6.15 Capsicum annuum HOM05D005831 ORTHO05D007007 2.6e-82 309.3 241 68.5
TWI15G0825 Tripterygium wilfordii HOM05D005831 ORTHO05D007007 3.3e-82 308.9 245 68.2
Haze_18115 Corylus avellana HOM05D005831 ORTHO05D007007 4.4e-82 308.5 239 68.6
DCAR_003715 Daucus carota HOM05D005831 ORTHO05D007007 4.4e-82 308.5 248 67.3
SalBow4G2055 Salvia bowleyana HOM05D005831 ORTHO05D001900 4.4e-82 308.5 242 65.3
PSO210G0521 Papaver somniferum HOM05D005831 ORTHO05D007007 9.7e-82 307.4 245 66.1
Cpa.g.sc126.34 Carica papaya HOM05D005831 ORTHO05D007007 2.2e-81 306.2 247 68.0
ClCG05G015690 Citrullus lanatus HOM05D005831 ORTHO05D007007 2.2e-81 306.2 253 66.8
Nn8g38706 Nelumbo nucifera HOM05D005831 ORTHO05D007007 2.8e-81 305.8 246 65.0
CDE06G1722 Ceratophyllum demersum HOM05D005831 ORTHO05D007007 3.7e-81 305.4 237 65.4
CsaV3_4G036010 Cucumis sativus L. HOM05D005831 ORTHO05D007007 3.7e-81 305.4 253 66.0
Sed0012871 Sechium edule HOM05D005831 ORTHO05D007007 3.7e-81 305.4 252 65.5
AUR62020581 Chenopodium quinoa HOM05D005831 ORTHO05D007007 4.8e-81 305.1 227 69.6
Gohir.D07G020000 Gossypium hirsutum HOM05D005831 ORTHO05D007007 6.3e-81 304.7 253 67.6
Oeu027284.3 Olea europaea HOM05D005831 ORTHO05D007007 1.1e-80 303.9 246 67.1
PSO210G7793 Papaver somniferum HOM05D005831 ORTHO05D007007 1.1e-80 303.9 253 64.0
Aqoxy3G01546 Aquilegia oxysepala HOM05D005831 ORTHO05D007007 1.4e-80 303.5 256 65.2
TAR383G0824 Trochodendron aralioides HOM05D005831 ORTHO05D007007 1.4e-80 303.5 219 72.6
MSTRG.25981 Avicennia marina HOM05D005831 ORTHO05D007007 2.4e-80 302.8 250 64.8
BcaB08g35248 Brassica carinata HOM05D005831 ORTHO05D007007 2.4e-80 302.8 233 68.2
Nitab4.5_0009773g0010 Nicotiana tabacum HOM05D005831 ORTHO05D007007 4.1e-80 302.0 249 63.1
Rhsim03G0040100 Rhododendron simsii HOM05D005831 ORTHO05D007007 9.1e-80 300.8 231 68.0
vmacro07801 Vaccinium macrocarpon HOM05D005831 ORTHO05D007007 1.2e-79 300.4 231 66.2
Ciclev10025877m.g Citrus clementina HOM05D005831 ORTHO05D007007 2.0e-79 299.7 230 69.1
Ca_13107_v3 Cicer arietinum L. HOM05D005831 ORTHO05D007007 2.6e-79 299.3 259 66.4
Eucgr.C03149 Eucalyptus grandis HOM05D005831 ORTHO05D007007 2.6e-79 299.3 250 64.4
BcaC07g40824 Brassica carinata HOM05D005831 ORTHO05D007007 7.7e-79 297.7 231 68.4
A09p54720 Brassica napus HOM05D005831 ORTHO05D007007 3.8e-78 295.4 236 66.1
Sp4g07000 Schrenkiella parvula HOM05D005831 ORTHO05D007007 3.8e-78 295.4 249 62.7
Carub.0004s0626 Capsella rubella HOM05D005831 ORTHO05D007007 6.5e-78 294.7 250 63.6
Cc08_g01270 Coffea canephora HOM05D005831 ORTHO05D007007 1.9e-77 293.1 256 63.7
AT2G26350 Arabidopsis thaliana HOM05D005831 ORTHO05D007007 4.2e-77 292.0 244 64.3
C08p38160 Brassica napus HOM05D005831 ORTHO05D007007 4.2e-77 292.0 231 67.5
BolC8t51391H Brassica oleracea HOM05D005831 ORTHO05D007007 4.2e-77 292.0 231 67.5
AL4G18970 Arabidopsis lyrata HOM05D005831 ORTHO05D007007 7.2e-77 291.2 251 62.9
BraA09t40881Z Brassica rapa HOM05D005831 ORTHO05D007007 9.4e-77 290.8 234 65.8
Thhalv10002014m.g Eutrema salsugineum HOM05D005831 ORTHO05D007007 9.4e-77 290.8 226 66.4
BraA09t40930Z Brassica rapa HOM05D005831 ORTHO05D007007 1.2e-76 290.4 234 65.4
Peaxi162Scf00101g01522 Petunia axillaris HOM05D005831 ORTHO05D007007 1.2e-76 290.4 259 62.5
A09p55230 Brassica napus HOM05D005831 ORTHO05D007007 1.6e-76 290.0 229 67.2
Aa31LG5G18500 Aethionema arabicum HOM05D005831 ORTHO05D007007 2.7e-76 289.3 250 62.0
Sc09g0010090 Simmondsia chinensis HOM05D005831 ORTHO05D007007 1.8e-75 286.6 255 62.7
EL10Ac2g03793 Beta vulgaris HOM05D005831 ORTHO05D007007 2.3e-75 286.2 227 64.3
unitig_748.g8240 Utricularia gibba HOM05D005831 ORTHO05D007007 3.3e-74 282.3 249 59.8
arahy.Tifrunner.gnm1.ann1.2ULK6I Arachis hypogaea HOM05D005831 ORTHO05D007007 2.8e-73 279.3 255 61.2
ATR0598G074 Amborella trichopoda HOM05D005831 ORTHO05D007007 8.2e-73 277.7 230 62.2
Os07g0608800 Oryza sativa ssp. japonica HOM05D005831 ORTHO05D007007 4.1e-72 275.4 251 59.0
AUR62009089 Chenopodium quinoa HOM05D005831 ORTHO05D007007 1.0e-70 270.8 206 68.4
FAN27G2028 Fragaria x ananassa HOM05D005831 ORTHO05D007007 1.7e-70 270.0 217 67.3
Aqoxy2G00096 Aquilegia oxysepala HOM05D005831 ORTHO05D007007 6.8e-67 258.1 212 66.5
Lj2A627G34 Lonicera japonica HOM05D005831 ORTHO05D007007 2.0e-66 256.5 225 62.7
FAN20G1335 Fragaria x ananassa HOM05D001583 ORTHO05D007007 7.5e-66 254.6 261 57.5
Dinv41837 Davidia involucrata HOM05D005831 ORTHO05D007007 1.8e-64 250.0 195 67.2
Sabra06G0171700 Salix brachista HOM05D005831 ORTHO05D007007 4.1e-64 248.8 277 52.7
Psat6g022600 Pisum sativum HOM05D005831 ORTHO05D007007 1.6e-63 246.9 177 75.1
SGA_v2.0_scaffold64G21865 Striga asiatica HOM05D005831 ORTHO05D007007 4.5e-63 245.4 226 58.8
Aqoxy3G01853 Aquilegia oxysepala HOM05D005831 ORTHO05D007007 1.7e-62 243.4 205 66.3
TWI38G0260 Tripterygium wilfordii HOM05D005831 ORTHO05D007007 6.1e-60 235.0 229 59.0
Mapoly0029s0064 Marchantia polymorpha HOM05D005831 ORTHO05D007007 4.4e-58 228.8 257 51.4
MELO3C016909.2 Cucumis melo HOM05D005831 ORTHO05D007007 7.5e-58 228.0 209 60.8
Atru.chr7.1858 Acer truncatum HOM05D005831 ORTHO05D007007 1.3e-57 227.3 198 62.6
THA.LOC104806019 Tarenaya hassleriana HOM05D005831 ORTHO05D007007 2.4e-56 223.0 259 49.8
HPP92_027843 Vanilla planifolia HOM05D005831 ORTHO05D007007 2.4e-56 223.0 193 61.1
Pp3c13_19650 Physcomitrium patens HOM05D005831 ORTHO05D007007 4.1e-56 222.2 247 49.8
Migut.A00085 Erythranthe guttata HOM05D005831 ORTHO05D007007 1.2e-55 220.7 181 61.9
Gohir.A07G020300 Gossypium hirsutum HOM05D005831 ORTHO05D007007 1.5e-53 213.8 177 66.1
arahy.Tifrunner.gnm1.ann1.12X2WP Arachis hypogaea HOM05D005831 ORTHO05D007007 1.9e-53 213.4 211 58.3
Actinidia27570 Actinidia chinensis HOM05D005831 ORTHO05D007007 6.8e-51 204.9 214 53.3
Sed0000493 Sechium edule HOM05D005831 ORTHO05D007007 4.4e-50 202.2 177 60.5
TPR.G40658 Trifolium pratense HOM05D005831 ORTHO05D007007 1.3e-49 200.7 143 76.9
Zm00001eb108960 Zea mays HOM05D005831 ORTHO05D007007 3.2e-48 196.1 154 63.0
TPR.G38878 Trifolium pratense HOM05D005831 ORTHO05D007007 1.0e-43 181.0 125 78.4
Hma1.2p1_0231F.1_g097410 Hydrangea macrophylla HOM05D005831 ORTHO05D007007 2.4e-40 169.9 158 59.5
QL04p096516 Quercus lobata HOM05D000005 ORTHO05D000012 3.0e-38 162.9 153 60.1
arahy.Tifrunner.gnm1.ann1.VR587A Arachis hypogaea HOM05D005831 ORTHO05D007007 4.3e-37 159.1 258 45.0
CBR_g34477 Chara braunii HOM05D005831 ORTHO05D007007 5.6e-29 132.1 360 30.0
SHI18844 Sapria himalayana HOM05D005831 ORTHO05D007007 4.4e-26 122.5 150 50.7
PRCOL_00001676 Prasinoderma coloniale HOM05D005831 ORTHO05D007007 4.9e-25 119.0 203 36.5
SEGI_09079 Sequoiadendron giganteum HOM05D000023 ORTHO05D000014 2.1e-23 113.6 145 46.2
Cre07.g337050 Chlamydomonas reinhardtii HOM05D005831 ORTHO05D007007 5.8e-18 95.5 131 43.5
SEGI_09068 Sequoiadendron giganteum HOM05D005831 ORTHO05D007007 1.1e-16 91.3 83 57.8
AagrBONN_evm.TU.Sc2ySwM_117.3066 Anthoceros agrestis HOM05D005831 ORTHO05D007007 4.2e-16 89.4 66 62.1
arahy.Tifrunner.gnm1.ann1.FV9EQX Arachis hypogaea HOM05D005831 ORTHO05D007007 4.2e-16 89.4 66 66.7
Cfa027250 Carpinus fangiana HOM05D005831 ORTHO05D007007 4.2e-16 89.4 215 30.2
MCO12G124 Micromonas commoda HOM05D005831 ORTHO05D007007 1.1e-13 81.3 113 41.6
Psat0s2173g0120 Pisum sativum HOM05D012210 ORTHO05D007007 1.6e-12 77.4 50 80.0
RcHm_v2.0_Chr4g0387071 Rosa chinensis HOM05D005831 ORTHO05D007007 2.1e-12 77.0 98 48.0
Solyc08g061880.2 Solanum lycopersicum HOM05D005831 ORTHO05D007007 3.4e-10 69.7 61 67.2
QL06p019149 Quercus lobata HOM05D005831 ORTHO05D007007 2.2e-09 67.0 67 59.7
Aqoxy5G02406 Aquilegia oxysepala HOM05D005831 ORTHO05D007007 4.9e-09 65.9 62 56.5
Actinidia28224 Actinidia chinensis HOM05D000290 ORTHO05D007007 1.6e-07 60.8 31 83.9


User provided reference genes

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