Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G10550 Trifolium pratense HOM05D000072 ORTHO05D000026 5.2e-71 270.8 122 100.0
TPR.G36960 Trifolium pratense HOM05D000072 ORTHO05D000026 7.8e-59 230.3 116 90.5
Medtr1g031510 Medicago truncatula HOM05D000072 ORTHO05D000026 3.0e-34 148.7 119 59.7
Medtr1g031490 Medicago truncatula HOM05D000072 ORTHO05D000026 5.1e-34 147.9 109 62.4
Psat6g043840 Pisum sativum HOM05D000072 ORTHO05D000026 2.0e-30 136.0 125 60.0
TPR.G36852 Trifolium pratense HOM05D000072 ORTHO05D000026 3.4e-30 135.2 117 58.1
Medtr1g031280 Medicago truncatula HOM05D000072 ORTHO05D000026 4.9e-29 131.3 123 52.0
Medtr1g031520 Medicago truncatula HOM05D000072 ORTHO05D000026 4.9e-29 131.3 117 56.4
Psat6g043760 Pisum sativum HOM05D000072 ORTHO05D000026 7.1e-28 127.5 114 51.8
TPR.G36858 Trifolium pratense HOM05D000072 ORTHO05D000026 1.6e-27 126.3 115 51.3
TPR.G36873 Trifolium pratense HOM05D000072 ORTHO05D000026 3.0e-26 122.1 115 53.0
Medtr1g031560 Medicago truncatula HOM05D000072 ORTHO05D000026 3.9e-26 121.7 117 52.1
Medtr1g031400 Medicago truncatula HOM05D000072 ORTHO05D000026 1.5e-25 119.8 112 54.5
TPR.G36947 Trifolium pratense HOM05D000072 ORTHO05D000026 2.1e-24 115.9 122 49.2
Medtr1g031450 Medicago truncatula HOM05D000072 ORTHO05D000026 4.8e-24 114.8 112 50.0
Medtr1g031535 Medicago truncatula HOM05D000072 ORTHO05D000026 4.8e-24 114.8 112 50.0
Lj1g0010682 Lotus japonicus HOM05D000072 ORTHO05D000026 1.8e-23 112.8 118 49.2
TPR.G36931 Trifolium pratense HOM05D000072 ORTHO05D000026 1.7e-21 106.3 121 44.6
Lalb_Chr08g0240421 Lupinus albus HOM05D000072 ORTHO05D000026 1.2e-19 100.1 115 42.6
Lj1g0013814 Lotus japonicus HOM05D000072 ORTHO05D000026 1.6e-19 99.8 119 48.7
Lj1g0025182 Lotus japonicus HOM05D000072 ORTHO05D000026 3.0e-18 95.5 118 46.6
arahy.Tifrunner.gnm1.ann1.GER4JL Arachis hypogaea HOM05D000072 ORTHO05D000026 6.6e-18 94.4 97 47.4
Lalb_Chr11g0066761 Lupinus albus HOM05D000072 ORTHO05D000026 1.1e-17 93.6 114 43.0
arahy.Tifrunner.gnm1.ann1.VG7HYF Arachis hypogaea HOM05D000072 ORTHO05D000026 5.6e-17 91.3 112 42.9
arahy.Tifrunner.gnm1.ann1.66KSYH Arachis hypogaea HOM05D000072 ORTHO05D000026 6.2e-16 87.8 98 46.9
arahy.Tifrunner.gnm1.ann1.CMRY8U Arachis hypogaea HOM05D007069 ORTHO05D008964 3.1e-15 85.5 100 44.0
arahy.Tifrunner.gnm1.ann1.122VE1 Arachis hypogaea HOM05D000072 ORTHO05D000026 4.0e-15 85.1 112 43.8
arahy.Tifrunner.gnm1.ann1.9I0PA4 Arachis hypogaea HOM05D000072 ORTHO05D000026 2.0e-14 82.8 112 42.9
arahy.Tifrunner.gnm1.ann1.HMBD7E Arachis hypogaea HOM05D000072 ORTHO05D000026 2.0e-14 82.8 120 40.0
arahy.Tifrunner.gnm1.ann1.MLS3VH Arachis hypogaea HOM05D000072 ORTHO05D000026 2.6e-14 82.4 97 47.4
arahy.Tifrunner.gnm1.ann1.YF0J7C Arachis hypogaea HOM05D000072 ORTHO05D000026 5.8e-14 81.3 97 46.4
arahy.Tifrunner.gnm1.ann1.TMTW0S Arachis hypogaea HOM05D000072 ORTHO05D000026 4.9e-13 78.2 80 45.0
arahy.Tifrunner.gnm1.ann1.QM6RHT Arachis hypogaea HOM05D000072 ORTHO05D000026 2.4e-12 75.9 80 46.2
arahy.Tifrunner.gnm1.ann1.TN704Z Arachis hypogaea HOM05D000072 ORTHO05D000026 3.2e-12 75.5 112 39.3
QL09p009937 Quercus lobata HOM05D000072 ORTHO05D000026 4.2e-12 75.1 125 33.6
QL09p010030 Quercus lobata HOM05D000072 ORTHO05D000026 1.0e-10 70.5 93 37.6
arahy.Tifrunner.gnm1.ann1.KD88GI Arachis hypogaea HOM05D000072 ORTHO05D000026 5.1e-10 68.2 83 50.6
FvH4_4g34450 Fragaria vesca HOM05D000072 ORTHO05D000026 6.7e-10 67.8 120 36.7
arahy.Tifrunner.gnm1.ann1.DFS8IZ Arachis hypogaea HOM05D000072 ORTHO05D000026 2.5e-09 65.9 97 37.1
QL12p039529 Quercus lobata HOM05D000072 ORTHO05D000026 3.3e-09 65.5 106 35.8
QL09p009834 Quercus lobata HOM05D000072 ORTHO05D000026 4.3e-09 65.1 93 36.6
QL09p009971 Quercus lobata HOM05D000072 ORTHO05D000026 4.3e-09 65.1 76 42.1
arahy.Tifrunner.gnm1.ann1.6B7DLZ Arachis hypogaea HOM05D000072 ORTHO05D000026 5.6e-09 64.7 97 37.1
PGSC0003DMG400029129 Solanum tuberosum HOM05D000072 ORTHO05D000026 5.6e-09 64.7 105 36.2
RcHm_v2.0_Chr1g0328281 Rosa chinensis HOM05D000072 ORTHO05D000026 7.4e-09 64.3 120 38.3
QL09p009750 Quercus lobata HOM05D000072 ORTHO05D000026 9.6e-09 63.9 102 35.3
Peaxi162Scf00032g00035 Petunia axillaris HOM05D000072 ORTHO05D000026 2.1e-08 62.8 106 34.9
QL01p008121 Quercus lobata HOM05D000072 ORTHO05D000026 2.1e-08 62.8 105 34.3
QL09p009890 Quercus lobata HOM05D000072 ORTHO05D000026 2.1e-08 62.8 113 34.5
arahy.Tifrunner.gnm1.ann1.42FXFC Arachis hypogaea HOM05D000072 ORTHO05D000026 2.8e-08 62.4 91 37.4
CAN.G809.85 Capsicum annuum HOM05D000072 ORTHO05D000026 3.7e-08 62.0 92 38.0
Cfa021379 Carpinus fangiana HOM05D000072 ORTHO05D000026 3.7e-08 62.0 99 36.4
QL09p010111 Quercus lobata HOM05D000072 ORTHO05D000026 3.7e-08 62.0 89 39.3
MD02G1273500 Malus domestica HOM05D000072 ORTHO05D000026 4.8e-08 61.6 99 35.4
PGSC0003DMG400020899 Solanum tuberosum HOM05D000072 ORTHO05D000026 6.2e-08 61.2 89 38.2
FAN10G3149 Fragaria x ananassa HOM05D000072 ORTHO05D000026 8.1e-08 60.8 103 37.9
SalBow4G0973 Salvia bowleyana HOM05D000072 ORTHO05D000026 8.1e-08 60.8 123 32.5
FAN17G2891 Fragaria x ananassa HOM05D000072 ORTHO05D000026 1.8e-07 59.7 111 34.2
Prupe.2G048700 Prunus persica HOM05D000072 ORTHO05D000026 1.8e-07 59.7 105 33.3
MSTRG.8670 Avicennia marina HOM05D000072 ORTHO05D000026 3.1e-07 58.9 98 31.6
CiPaw.05G254700 Carya illinoinensis HOM05D000072 ORTHO05D000026 3.1e-07 58.9 86 34.9
QL09p010161 Quercus lobata HOM05D000072 ORTHO05D000026 3.1e-07 58.9 92 35.9
RcHm_v2.0_Chr1g0328591 Rosa chinensis HOM05D000072 ORTHO05D000026 3.1e-07 58.9 115 33.0
SalBow4G3098 Salvia bowleyana HOM05D000072 ORTHO05D000026 3.1e-07 58.9 117 33.3
Nitab4.5_0000825g0100 Nicotiana tabacum HOM05D000072 ORTHO05D000026 4.0e-07 58.5 93 35.5
FAN22G1936 Fragaria x ananassa HOM05D000072 ORTHO05D000026 5.3e-07 58.2 104 35.6
FvH4_7g04150 Fragaria vesca HOM05D000072 ORTHO05D000026 6.9e-07 57.8 115 33.0
Medtr3g028640 Medicago truncatula HOM05D000072 ORTHO05D000026 6.9e-07 57.8 107 30.8
FAN12G0155 Fragaria x ananassa HOM05D000072 ORTHO05D000026 9.0e-07 57.4 108 35.2
Rhsim01G0115500 Rhododendron simsii HOM05D000072 ORTHO05D000026 9.0e-07 57.4 106 33.0
RcHm_v2.0_Chr1g0328501 Rosa chinensis HOM05D000072 ORTHO05D000026 9.0e-07 57.4 122 29.5
FvH4_7g20630 Fragaria vesca HOM05D000072 ORTHO05D000026 1.2e-06 57.0 102 36.3
FAN03G1257 Fragaria x ananassa HOM05D000072 ORTHO05D000026 1.5e-06 56.6 119 32.8
QL01p008108 Quercus lobata HOM05D000072 ORTHO05D000026 1.5e-06 56.6 86 36.0
CiPaw.08G124300 Carya illinoinensis HOM05D000072 ORTHO05D000026 2.0e-06 56.2 132 33.3
FAN10G2588 Fragaria x ananassa HOM05D000072 ORTHO05D000026 2.0e-06 56.2 102 35.3
Haze_10143 Corylus avellana HOM05D000072 ORTHO05D000026 2.6e-06 55.8 69 37.7
FvH4_7g04170 Fragaria vesca HOM05D000072 ORTHO05D000026 2.6e-06 55.8 115 31.3
RcHm_v2.0_Chr1g0328221 Rosa chinensis HOM05D000072 ORTHO05D000026 2.6e-06 55.8 95 36.8
Cfa021256 Carpinus fangiana HOM05D000072 ORTHO05D000026 3.4e-06 55.5 105 32.4
CiPaw.05G254500 Carya illinoinensis HOM05D000072 ORTHO05D000026 3.4e-06 55.5 98 31.6
FAN07G0463 Fragaria x ananassa HOM05D000072 ORTHO05D000026 3.4e-06 55.5 108 34.3
Solyc11g007410.3 Solanum lycopersicum HOM05D000072 ORTHO05D000026 3.4e-06 55.5 94 34.0
FvH4_7g04160 Fragaria vesca HOM05D000072 ORTHO05D000026 4.5e-06 55.1 95 34.7
Medtr1g027830 Medicago truncatula HOM05D000072 ORTHO05D000026 4.5e-06 55.1 107 30.8
Nitab4.5_0000108g0090 Nicotiana tabacum HOM05D000072 ORTHO05D000026 4.5e-06 55.1 89 34.8
Nitab4.5_0000825g0110 Nicotiana tabacum HOM05D000072 ORTHO05D000026 5.8e-06 54.7 97 34.0
Nitab4.5_0005600g0010 Nicotiana tabacum HOM05D000072 ORTHO05D000026 7.6e-06 54.3 102 33.3
Solyc11g007430.3 Solanum lycopersicum HOM05D000072 ORTHO05D000026 1.0e-05 53.9 94 34.0


User provided reference genes

Program Settings