Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G10521 Trifolium pratense HOM05D000561 ORTHO05D008162 1.0e-168 596.7 308 100.0
Psat5g044440 Pisum sativum HOM05D000561 ORTHO05D008162 1.2e-140 503.4 309 85.4
Medtr3g101350 Medicago truncatula HOM05D000561 ORTHO05D008162 2.0e-140 502.7 311 85.5
Ca_15966_v3 Cicer arietinum L. HOM05D000561 ORTHO05D008162 8.9e-128 460.7 292 85.6
Lj1g0015016 Lotus japonicus HOM05D000561 ORTHO05D008162 9.9e-127 457.2 311 77.2
arahy.Tifrunner.gnm1.ann1.YYC1CT Arachis hypogaea HOM05D000561 ORTHO05D008162 2.1e-124 449.5 293 79.9
Lalb_Chr08g0245641 Lupinus albus HOM05D000561 ORTHO05D008162 2.1e-124 449.5 309 77.3
Phvul.009G063100 Phaseolus vulgaris HOM05D000561 ORTHO05D008162 2.6e-119 432.6 308 75.0
Glyma.06G037300 Glycine max HOM05D000561 ORTHO05D008162 4.1e-117 425.2 300 75.7
Atru.chr13.629 Acer truncatum HOM05D000561 ORTHO05D008162 1.6e-105 386.7 257 75.1
Atru.chr13.633 Acer truncatum HOM05D000561 ORTHO05D008162 1.6e-105 386.7 257 75.1
Duzib116G0222 Durio zibethinus HOM05D000561 ORTHO05D008162 1.4e-104 383.6 308 68.5
Potri.014G034700 Populus trichocarpa HOM05D000561 ORTHO05D008162 1.5e-103 380.2 303 66.0
TWI56G0230 Tripterygium wilfordii HOM05D000561 ORTHO05D008162 1.9e-101 373.2 296 66.9
TAR628G0509 Trochodendron aralioides HOM05D000561 ORTHO05D008162 9.3e-101 370.9 307 64.8
CSS0036187 Camellia sinensis var. sinensis HOM05D000561 ORTHO05D008162 2.7e-100 369.4 255 74.9
CiPaw.16G047800 Carya illinoinensis HOM05D000561 ORTHO05D008162 2.7e-100 369.4 264 71.2
Sed0001510 Sechium edule HOM05D000561 ORTHO05D008162 3.5e-100 369.0 311 64.3
TAR625G0340 Trochodendron aralioides HOM05D000561 ORTHO05D008162 7.9e-100 367.9 277 67.9
Nn5g30201 Nelumbo nucifera HOM05D000561 ORTHO05D000514 3.0e-99 365.9 257 72.0
RcHm_v2.0_Chr6g0307161 Rosa chinensis HOM05D000561 ORTHO05D008162 3.0e-99 365.9 254 73.2
Prupe.1G440800 Prunus persica HOM05D000561 ORTHO05D008162 3.9e-99 365.5 301 65.4
GSVIVG01009559001 Vitis vinifera HOM05D000561 ORTHO05D008162 1.1e-98 364.0 309 64.4
Ciclev10001965m.g Citrus clementina HOM05D000561 ORTHO05D008162 1.9e-98 363.2 303 65.7
QL02p005893 Quercus lobata HOM05D000561 ORTHO05D008162 3.3e-98 362.5 255 71.8
Gohir.D05G203500 Gossypium hirsutum HOM05D000561 ORTHO05D008162 4.3e-98 362.1 308 64.3
MD08G1106500 Malus domestica HOM05D000561 ORTHO05D008162 4.3e-98 362.1 283 68.9
Dinv39338 Davidia involucrata HOM05D000561 ORTHO05D008162 5.6e-98 361.7 312 63.1
Actinidia22609 Actinidia chinensis HOM05D000561 ORTHO05D008162 9.6e-98 360.9 313 64.5
Sabra14G0024600 Salix brachista HOM05D000561 ORTHO05D008162 2.1e-97 359.8 283 68.9
Duzib093G1567 Durio zibethinus HOM05D000561 ORTHO05D008162 8.1e-97 357.8 308 63.6
Gorai.009G209500 Gossypium raimondii HOM05D000561 ORTHO05D008162 1.1e-96 357.5 309 64.1
Hma1.2p1_0260F.1_g104740 Hydrangea macrophylla HOM05D000561 ORTHO05D008162 1.4e-96 357.1 309 63.1
ClCG08G015630 Citrullus lanatus HOM05D000561 ORTHO05D008162 3.1e-96 355.9 291 65.3
vmacro21557 Vaccinium macrocarpon HOM05D000561 ORTHO05D008162 3.1e-96 355.9 307 64.5
Sp4g07760 Schrenkiella parvula HOM05D000561 ORTHO05D008162 5.3e-96 355.1 313 60.7
MD15G1087100 Malus domestica HOM05D000561 ORTHO05D008162 6.9e-96 354.8 283 67.5
Gohir.A05G200200 Gossypium hirsutum HOM05D000561 ORTHO05D008162 9.0e-96 354.4 308 63.6
THA.LOC104803685 Tarenaya hassleriana HOM05D000561 ORTHO05D008162 9.0e-96 354.4 255 69.0
Rhsim06G0046600 Rhododendron simsii HOM05D000561 ORTHO05D008162 1.2e-95 354.0 306 63.4
Solyc04g079320.4 Solanum lycopersicum HOM05D000561 ORTHO05D008162 1.5e-95 353.6 255 68.6
Sopen04g032930 Solanum pennellii HOM05D000561 ORTHO05D008162 1.5e-95 353.6 255 68.6
VMungo1309G1588 Vigna mungo HOM05D000561 ORTHO05D008162 1.5e-95 353.6 230 76.5
MELO3C010892.2 Cucumis melo HOM05D000561 ORTHO05D008162 2.0e-95 353.2 298 64.1
Manes.05G170800 Manihot esculenta HOM05D000561 ORTHO05D008162 4.5e-95 352.1 296 64.9
CAN.G371.47 Capsicum annuum HOM05D000561 ORTHO05D008162 7.6e-95 351.3 249 70.3
A09p55150 Brassica napus HOM05D000561 ORTHO05D008162 4.9e-94 348.6 258 67.8
C08p38080 Brassica napus HOM05D000561 ORTHO05D008162 1.9e-93 346.7 258 67.1
CsaV3_2G028140 Cucumis sativus L. HOM05D000561 ORTHO05D008162 1.9e-93 346.7 292 64.4
Thecc.08G013400 Theobroma cacao HOM05D000561 ORTHO05D008162 1.9e-93 346.7 280 67.5
FAN27G1876 Fragaria x ananassa HOM05D000561 ORTHO05D008162 2.4e-93 346.3 284 65.5
AT2G26540 Arabidopsis thaliana HOM05D000561 ORTHO05D008162 3.2e-93 345.9 302 59.6
Haze_17567 Corylus avellana HOM05D000561 ORTHO05D008162 4.2e-93 345.5 296 63.2
DCAR_019467 Daucus carota HOM05D000561 ORTHO05D008162 5.5e-93 345.1 298 62.4
BolC8t51383H Brassica oleracea HOM05D000561 ORTHO05D008162 7.1e-93 344.7 258 66.7
AL4G19400 Arabidopsis lyrata HOM05D000561 ORTHO05D008162 9.3e-93 344.4 295 61.7
COL.COLO4_26457 Corchorus olitorius HOM05D000561 ORTHO05D008162 9.3e-93 344.4 231 74.0
PSO675G5921 Papaver somniferum HOM05D000561 ORTHO05D008162 9.3e-93 344.4 275 64.4
BraA09t40923Z Brassica rapa HOM05D000561 ORTHO05D008162 1.2e-92 344.0 258 66.7
CARHR050650 Cardamine hirsuta HOM05D000561 ORTHO05D008162 1.2e-92 344.0 309 58.6
Carub.0003s2738 Capsella rubella HOM05D000561 ORTHO05D008162 1.6e-92 343.6 254 66.5
BcaB08g35302 Brassica carinata HOM05D000561 ORTHO05D008162 2.7e-92 342.8 300 59.7
Aqoxy6G01386 Aquilegia oxysepala HOM05D000561 ORTHO05D008162 1.8e-91 340.1 249 68.3
Cc10_g03990 Coffea canephora HOM05D000561 ORTHO05D008162 1.8e-91 340.1 270 65.2
HanXRQChr09g0268001 Helianthus annuus HOM05D000561 ORTHO05D008162 1.8e-91 340.1 307 59.3
PSO541G5839 Papaver somniferum HOM05D000561 ORTHO05D008162 2.3e-91 339.7 266 65.0
FvH4_2g34880 Fragaria vesca HOM05D000561 ORTHO05D008162 1.9e-90 336.7 243 71.2
Nitab4.5_0005549g0040 Nicotiana tabacum HOM05D000561 ORTHO05D008162 3.3e-90 335.9 241 70.5
Nitab4.5_0000068g0440 Nicotiana tabacum HOM05D000561 ORTHO05D008162 4.3e-90 335.5 234 71.8
Thhalv10001252m.g Eutrema salsugineum HOM05D000561 ORTHO05D008162 7.4e-90 334.7 312 58.3
Aa31LG10G9880 Aethionema arabicum HOM05D000561 ORTHO05D008162 1.6e-89 333.6 272 61.8
CDE06G2652 Ceratophyllum demersum HOM05D000561 ORTHO05D008162 2.8e-89 332.8 294 60.2
BcaC07g40815 Brassica carinata HOM05D000561 ORTHO05D008162 4.8e-89 332.0 245 66.5
HanXRQChr02g0038741 Helianthus annuus HOM05D000561 ORTHO05D008162 6.2e-89 331.6 312 56.4
Manes.18G034000 Manihot esculenta HOM05D000561 ORTHO05D008162 8.2e-89 331.3 282 65.2
MBI06_g08185_MAGBIO Magnolia biondii HOM05D000561 ORTHO05D008162 1.4e-88 330.5 294 59.9
Lsat_1_v5_gn_1_20480 Lactuca sativa HOM05D000561 ORTHO05D008162 5.3e-88 328.6 301 59.5
Peaxi162Scf00566g00219 Petunia axillaris HOM05D000561 ORTHO05D008162 9.0e-88 327.8 234 70.9
ECA232G0584 Erigeron canadensis HOM05D000561 ORTHO05D008162 1.0e-86 324.3 284 58.8
Glyma.04G037000 Glycine max HOM05D000561 ORTHO05D008162 1.7e-86 323.6 215 79.1
MSTRG.1332 Avicennia marina HOM05D000561 ORTHO05D008162 2.2e-86 323.2 267 62.9
Eucgr.F02370 Eucalyptus grandis HOM05D000561 ORTHO05D008162 1.1e-85 320.9 231 68.8
Lsat_1_v5_gn_4_124200 Lactuca sativa HOM05D000561 ORTHO05D008162 1.4e-85 320.5 305 56.7
Sabra02G0100300 Salix brachista HOM05D000561 ORTHO05D008162 1.4e-85 320.5 278 64.7
HPP92_011186 Vanilla planifolia HOM05D000561 ORTHO05D008162 4.2e-85 318.9 295 58.0
Migut.C00604 Erythranthe guttata HOM05D000561 ORTHO05D008162 2.1e-84 316.6 265 63.0
PGR031G3300 Punica granatum HOM05D000561 ORTHO05D008162 4.6e-84 315.5 252 66.7
Os03g0186100 Oryza sativa ssp. japonica HOM05D000561 ORTHO05D008162 3.9e-83 312.4 254 61.8
Zm00001eb006450 Zea mays HOM05D000561 ORTHO05D008162 3.9e-83 312.4 242 62.4
SalBow7G2378 Salvia bowleyana HOM05D000561 ORTHO05D008162 9.7e-82 307.8 298 55.0
SGA_v2.0_scaffold71G24043 Striga asiatica HOM05D000561 ORTHO05D008162 2.2e-81 306.6 259 62.2
EL10Ac1g01805 Beta vulgaris HOM05D000561 ORTHO05D008162 8.2e-81 304.7 288 58.0
ATR0087G004 Amborella trichopoda HOM05D000561 ORTHO05D008162 1.5e-79 300.4 227 64.8
Migut.O00512 Erythranthe guttata HOM05D000561 ORTHO05D008162 2.2e-78 296.6 292 54.1
FAN20G2490 Fragaria x ananassa HOM05D000561 ORTHO05D008162 2.2e-78 296.6 382 49.5
Hund26617 Selenicereus undatus HOM05D000561 ORTHO05D008162 2.2e-78 296.6 408 46.1
Pp3c9_18350 Physcomitrium patens HOM05D000561 ORTHO05D008162 1.8e-72 276.9 249 53.4
Mapoly0101s0072 Marchantia polymorpha HOM05D000561 ORTHO05D008162 1.0e-70 271.2 258 53.9
Lj4A51T47 Lonicera japonica HOM05D000561 ORTHO05D008162 5.0e-70 268.9 188 71.8
Cpa.g.sc64.2 Carica papaya HOM05D000561 ORTHO05D008162 6.5e-70 268.5 188 70.7
AUR62022458 Chenopodium quinoa HOM05D000561 ORTHO05D008162 3.0e-67 259.6 235 60.4
Ah.06g192790 Amaranthus hybridus HOM05D000561 ORTHO05D008162 3.9e-67 259.2 288 52.1
AagrBONN_evm.TU.Sc2ySwM_228.1283 Anthoceros agrestis HOM05D000561 ORTHO05D008162 1.5e-66 257.3 245 52.7
Carub.0004s0671 Capsella rubella HOM05D000561 ORTHO05D008162 3.3e-66 256.1 311 50.5
SHI08313 Sapria himalayana HOM05D000561 ORTHO05D008162 3.1e-64 249.6 248 54.0
SEGI_40608 Sequoiadendron giganteum HOM05D000561 ORTHO05D008162 3.1e-64 249.6 210 57.1
arahy.Tifrunner.gnm1.ann1.96H4RR Arachis hypogaea HOM05D000561 ORTHO05D008162 4.5e-63 245.7 141 88.7
ECA247G1201 Erigeron canadensis HOM05D000561 ORTHO05D000514 1.1e-61 241.1 196 59.7
CBR_g12178 Chara braunii HOM05D000561 ORTHO05D008162 7.4e-58 228.4 269 45.4
SMO367G0032 Selaginella moellendorffii HOM05D000561 ORTHO05D008162 4.8e-57 225.7 270 45.6
Sc26g0003980 Simmondsia chinensis HOM05D000561 ORTHO05D008162 7.0e-56 221.9 193 62.7
AUR62040067 Chenopodium quinoa HOM05D000561 ORTHO05D008162 3.8e-54 216.1 294 45.9
CDE10G0258 Ceratophyllum demersum HOM05D000561 ORTHO05D008162 1.4e-51 207.6 170 63.5
Cre09.g409100 Chlamydomonas reinhardtii HOM05D000561 ORTHO05D008162 5.2e-51 205.7 248 45.6
MCO15G161 Micromonas commoda HOM05D000561 ORTHO05D008162 8.3e-49 198.4 279 43.4
Migut.N02692 Erythranthe guttata HOM05D000561 ORTHO05D008162 2.2e-46 190.3 204 52.5
PRCOL_00005348 Prasinoderma coloniale HOM05D000561 ORTHO05D008162 2.9e-46 189.9 247 43.3
unitig_32.g11128 Utricularia gibba HOM05D000561 ORTHO05D008162 1.2e-42 177.9 140 62.1
Lsat_1_v5_gn_2_45600 Lactuca sativa HOM05D000561 ORTHO05D008162 2.1e-36 157.1 202 44.6
SGA_v2.0_scaffold217G42442 Striga asiatica HOM05D000561 ORTHO05D008162 2.3e-35 153.7 122 61.5
Lsat_1_v5_gn_5_145360 Lactuca sativa HOM05D000561 ORTHO05D008162 3.3e-29 133.3 162 46.3
SGA_v2.0_scaffold217G42441 Striga asiatica HOM05D000561 ORTHO05D008162 5.2e-19 99.4 79 60.8
Lsat_1_v5_gn_5_39421 Lactuca sativa HOM05D000487 ORTHO05D048384 1.7e-14 84.3 79 48.1


User provided reference genes

Program Settings