Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G10459 Trifolium pratense HOM05D005276 ORTHO05D006813 1.1e-127 459.9 222 100.0
TPR.G40462 Trifolium pratense HOM05D005276 ORTHO05D006813 2.3e-56 223.0 108 100.0
Medtr6g045077 Medicago truncatula HOM05D005276 ORTHO05D006813 4.9e-51 205.3 219 47.9
Medtr0807s0020 Medicago truncatula HOM05D005276 ORTHO05D006813 2.0e-49 199.9 224 46.0
TPR.G33545 Trifolium pratense HOM05D005276 ORTHO05D006813 9.5e-47 191.0 219 46.6
Medtr6g048620 Medicago truncatula HOM05D005276 ORTHO05D006813 2.1e-46 189.9 225 48.0
Medtr6g048910 Medicago truncatula HOM05D005276 ORTHO05D006813 2.8e-46 189.5 221 47.1
Psat0s971g0080 Pisum sativum HOM05D005276 ORTHO05D006813 2.3e-45 186.4 223 45.7
Ca_03455_v3 Cicer arietinum L. HOM05D005276 ORTHO05D006813 8.9e-45 184.5 227 44.1
Medtr8g038100 Medicago truncatula HOM05D005276 ORTHO05D006813 1.3e-43 180.6 222 40.1
Medtr0695s0030 Medicago truncatula HOM05D005276 ORTHO05D006813 2.9e-43 179.5 226 39.4
TPR.G33522 Trifolium pratense HOM05D005276 ORTHO05D006813 2.9e-43 179.5 223 41.7
Ca_08210_v3 Cicer arietinum L. HOM05D005276 ORTHO05D006813 4.9e-43 178.7 222 42.8
VMungo0720G2700 Vigna mungo HOM05D005276 ORTHO05D006813 6.4e-43 178.3 226 43.4
Psat0s876g0120 Pisum sativum HOM05D005276 ORTHO05D006813 1.4e-42 177.2 226 42.0
Medtr1g066530 Medicago truncatula HOM05D005276 ORTHO05D006813 4.1e-42 175.6 224 40.2
Psat0s876g0040 Pisum sativum HOM05D005276 ORTHO05D006813 7.0e-42 174.9 226 42.0
Medtr8g038070 Medicago truncatula HOM05D005276 ORTHO05D006813 2.0e-41 173.3 226 38.5
Medtr0216s0030 Medicago truncatula HOM05D005276 ORTHO05D006813 3.5e-41 172.6 203 41.9
VMungo0720G1899 Vigna mungo HOM05D005276 ORTHO05D006813 1.1e-39 167.5 223 39.5
TPR.G33532 Trifolium pratense HOM05D005276 ORTHO05D006813 1.5e-39 167.2 222 41.0
TWI23G0671 Tripterygium wilfordii HOM05D005276 ORTHO05D006813 1.9e-39 166.8 222 39.6
VMungo0720G3131 Vigna mungo HOM05D005276 ORTHO05D006813 3.3e-39 166.0 224 40.6
Rhsim04G0165600 Rhododendron simsii HOM05D005276 ORTHO05D006813 1.2e-38 164.1 221 39.8
Medtr6g073540 Medicago truncatula HOM05D005276 ORTHO05D006813 2.1e-38 163.3 232 40.1
Medtr6g040290 Medicago truncatula HOM05D005276 ORTHO05D006813 6.2e-38 161.8 224 40.6
Psat0s1021g0280 Pisum sativum HOM05D005276 ORTHO05D006813 1.1e-37 161.0 222 40.1
Phvul.007G276500 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 2.3e-37 159.8 222 38.7
Medtr0057s0100 Medicago truncatula HOM05D005276 ORTHO05D006813 8.9e-37 157.9 222 38.7
Medtr6g048810 Medicago truncatula HOM05D005276 ORTHO05D006813 1.5e-36 157.1 299 33.4
Phvul.007G275900 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.5e-36 157.1 224 39.3
VMungo0720G2128 Vigna mungo HOM05D005276 ORTHO05D006813 1.5e-36 157.1 222 38.3
Actinidia07622 Actinidia chinensis HOM05D005276 ORTHO05D006813 2.6e-36 156.4 222 39.2
Rhsim04G0073100 Rhododendron simsii HOM05D005276 ORTHO05D006813 2.6e-36 156.4 222 37.8
Psat5g117800 Pisum sativum HOM05D005276 ORTHO05D006813 3.4e-36 156.0 230 39.6
Psat5g117840 Pisum sativum HOM05D005276 ORTHO05D006813 3.4e-36 156.0 230 39.6
Medtr7g103990 Medicago truncatula HOM05D005276 ORTHO05D006813 7.5e-36 154.8 223 39.5
vmacro22834 Vaccinium macrocarpon HOM05D005276 ORTHO05D006813 9.8e-36 154.5 224 37.9
Rhsim05G0142600 Rhododendron simsii HOM05D005276 ORTHO05D006813 1.3e-35 154.1 221 37.1
Medtr0057s0170 Medicago truncatula HOM05D005276 ORTHO05D006813 2.9e-35 152.9 222 38.3
Hma1.2p1_0052F.1_g030780 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 3.7e-35 152.5 223 37.7
Hma1.2p1_0472F.1_g160005 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 3.7e-35 152.5 223 37.7
Phvul.007G277100 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 3.7e-35 152.5 222 37.8
Psat0s3494g0040 Pisum sativum HOM05D005276 ORTHO05D006813 3.7e-35 152.5 190 43.2
Psat1g110680 Pisum sativum HOM05D005276 ORTHO05D006813 3.7e-35 152.5 190 43.2
Medtr6g072470 Medicago truncatula HOM05D005276 ORTHO05D006813 4.9e-35 152.1 210 41.0
Ca_23693_v3 Cicer arietinum L. HOM05D005276 ORTHO05D006813 6.4e-35 151.8 268 35.4
Hma1.2p1_0472F.1_g160020 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 6.4e-35 151.8 223 37.7
Rhsim05G0197900 Rhododendron simsii HOM05D005276 ORTHO05D006813 1.1e-34 151.0 224 36.2
Phvul.007G275800 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.4e-34 150.6 223 37.7
Phvul.007G276300 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.4e-34 150.6 222 37.4
Phvul.008G252000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.9e-34 150.2 224 38.4
Rhsim04G0116800 Rhododendron simsii HOM05D005276 ORTHO05D006813 1.9e-34 150.2 222 36.0
PGR031G1219 Punica granatum HOM05D005276 ORTHO05D006813 2.4e-34 149.8 218 39.9
Phvul.007G276200 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 5.4e-34 148.7 222 37.8
Hma1.2p1_0370F.1_g137770 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 1.2e-33 147.5 223 36.3
Phvul.007G276000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.6e-33 147.1 224 36.6
RcHm_v2.0_Chr5g0076681 Rosa chinensis HOM05D005276 ORTHO05D006813 3.5e-33 146.0 224 37.1
Medtr6g048880 Medicago truncatula HOM05D005276 ORTHO05D006813 4.6e-33 145.6 177 44.1
Phvul.007G276100 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.0e-32 144.4 222 36.5
Rhsim08G0006900 Rhododendron simsii HOM05D005276 ORTHO05D006813 1.0e-32 144.4 222 35.1
Phvul.009G133400 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 6.6e-32 141.7 221 37.6
PGR102G3141 Punica granatum HOM05D005276 ORTHO05D006813 2.5e-31 139.8 226 34.1
Phvul.007G275700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 4.3e-31 139.0 204 37.3
Hma1.2p1_0472F.1_g159990 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 5.6e-31 138.7 197 41.1
Phvul.007G277000 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 9.5e-31 137.9 204 37.3
PGR102G1815 Punica granatum HOM05D005276 ORTHO05D006813 6.2e-30 135.2 228 34.2
PGR102G1949 Punica granatum HOM05D005276 ORTHO05D006813 1.4e-29 134.0 229 33.6
EL10Ac3g05487 Beta vulgaris HOM05D005276 ORTHO05D006813 2.0e-28 130.2 222 36.5
Phvul.007G263500 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 2.0e-28 130.2 220 35.5
Phvul.007G275600 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.3e-27 127.5 222 34.7
AUR62016119 Chenopodium quinoa HOM05D005276 ORTHO05D006813 1.1e-26 124.4 222 34.2
Ah.02g117180 Amaranthus hybridus HOM05D005276 ORTHO05D006813 1.4e-26 124.0 222 36.5
VMungo0720G1439 Vigna mungo HOM05D005276 ORTHO05D006813 4.6e-25 119.0 223 35.0
Ah.10g029400 Amaranthus hybridus HOM05D005276 ORTHO05D006813 1.3e-24 117.5 233 35.2
Lj3g0023477 Lotus japonicus HOM05D005276 ORTHO05D006813 1.3e-24 117.5 127 44.9
EL10Ac1g01354 Beta vulgaris HOM05D005276 ORTHO05D006813 1.7e-24 117.1 222 33.3
EL10Ac1g01356 Beta vulgaris HOM05D005276 ORTHO05D006813 1.7e-24 117.1 222 33.3
EL10Ac1g01358 Beta vulgaris HOM05D005276 ORTHO05D006813 1.7e-24 117.1 222 33.3
Phvul.007G263700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 5.1e-24 115.5 209 34.0
EL10Ac1g01352 Beta vulgaris HOM05D005276 ORTHO05D006813 1.1e-23 114.4 223 31.8
AUR62014887 Chenopodium quinoa HOM05D005276 ORTHO05D006813 2.5e-23 113.2 228 33.3
Os04g0213100 Oryza sativa ssp. japonica HOM05D005276 ORTHO05D006813 2.8e-22 109.8 231 31.6
AUR62041391 Chenopodium quinoa HOM05D005276 ORTHO05D006813 3.6e-22 109.4 222 31.5
Ah.02g121010 Amaranthus hybridus HOM05D005276 ORTHO05D006813 1.4e-21 107.5 231 32.9
Hma1.2p1_2291F.1_g319080 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 1.4e-21 107.5 165 35.8
TPR.G28516 Trifolium pratense HOM05D005276 ORTHO05D006813 5.2e-21 105.5 134 43.3
vmacro00373 Vaccinium macrocarpon HOM05D005276 ORTHO05D006813 8.9e-21 104.8 161 35.4
CSS0029999 Camellia sinensis var. sinensis HOM05D005276 ORTHO05D006813 1.5e-20 104.0 194 32.0
AUR62014758 Chenopodium quinoa HOM05D005276 ORTHO05D006813 1.5e-20 104.0 160 38.8
Phvul.007G276401 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 1.3e-19 100.9 133 39.1
Medtr4g102470 Medicago truncatula HOM05D005276 ORTHO05D006813 3.8e-19 99.4 188 35.6
EL10Ac1g02090 Beta vulgaris HOM05D005276 ORTHO05D006813 4.9e-19 99.0 226 30.5
EL10Ac1g02109 Beta vulgaris HOM05D005276 ORTHO05D006813 4.9e-19 99.0 226 30.5
AUR62024089 Chenopodium quinoa HOM05D005276 ORTHO05D006813 4.9e-19 99.0 221 29.0
Rhsim10G0134200 Rhododendron simsii HOM05D005276 ORTHO05D006813 8.4e-19 98.2 223 32.7
Medtr7g012000 Medicago truncatula HOM05D005276 ORTHO05D006813 1.1e-18 97.8 192 33.3
EL10Ac1g02097 Beta vulgaris HOM05D005276 ORTHO05D006813 7.1e-18 95.1 198 32.8
PGR102G2116 Punica granatum HOM05D005276 ORTHO05D006813 6.0e-17 92.0 164 34.1
EL10Ac2g04799 Beta vulgaris HOM05D005276 ORTHO05D006813 7.8e-17 91.7 198 31.8
Rhsim05G0197600 Rhododendron simsii HOM05D005276 ORTHO05D006813 1.0e-16 91.3 166 32.5
Medtr6g049040 Medicago truncatula HOM05D005276 ORTHO05D006813 1.7e-16 90.5 138 37.7
Phvul.002G269700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 3.9e-16 89.4 123 39.0
VMungo0720G2085 Vigna mungo HOM05D005276 ORTHO05D006813 3.9e-16 89.4 139 40.3
CSS0004680 Camellia sinensis var. sinensis HOM05D005276 ORTHO05D006813 1.1e-15 87.8 194 28.9
EL10Ac2g04798 Beta vulgaris HOM05D005276 ORTHO05D006813 1.5e-15 87.4 190 30.5
EL10Ac1g01353 Beta vulgaris HOM05D005276 ORTHO05D006813 7.3e-15 85.1 230 27.0
EL10Ac1g01355 Beta vulgaris HOM05D005276 ORTHO05D006813 7.3e-15 85.1 135 37.8
EL10Ac1g01357 Beta vulgaris HOM05D005276 ORTHO05D006813 7.3e-15 85.1 135 37.8
Dinv42431 Davidia involucrata HOM05D005276 ORTHO05D006813 1.3e-14 84.3 148 35.8
RcHm_v2.0_Chr5g0076491 Rosa chinensis HOM05D005276 ORTHO05D006813 2.8e-14 83.2 140 33.6
RcHm_v2.0_Chr5g0076401 Rosa chinensis HOM05D005276 ORTHO05D006813 3.6e-14 82.8 120 37.5
Lj6C375G5 Lonicera japonica HOM05D005276 ORTHO05D001431 6.2e-14 82.0 124 37.9
Phvul.007G276700 Phaseolus vulgaris HOM05D005276 ORTHO05D006813 6.2e-14 82.0 115 36.5
Hma1.2p1_0052F.1_g030770 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 4.0e-13 79.3 217 27.6
Hma1.2p1_0472F.1_g160029 Hydrangea macrophylla HOM05D005276 ORTHO05D006813 4.0e-13 79.3 217 27.6
TPR.G33490 Trifolium pratense HOM05D005276 ORTHO05D006813 4.0e-13 79.3 72 50.0
vmacro13228 Vaccinium macrocarpon HOM05D005276 ORTHO05D006813 9.0e-13 78.2 154 33.1
Ah.16g101350 Amaranthus hybridus HOM05D005276 ORTHO05D038198 2.6e-12 76.6 230 28.7
TPR.G33511 Trifolium pratense HOM05D005276 ORTHO05D006813 1.6e-09 67.4 69 44.9
RcHm_v2.0_Chr5g0076801 Rosa chinensis HOM05D005276 ORTHO05D006813 5.1e-08 62.4 126 31.7
Psat1g051400 Pisum sativum HOM05D005276 ORTHO05D006813 1.5e-07 60.8 83 37.3
AUR62016935 Chenopodium quinoa HOM05D005276 ORTHO05D006813 2.5e-07 60.1 142 28.2
EL10Ac1g02098 Beta vulgaris HOM05D005276 ORTHO05D006813 9.6e-07 58.2 96 33.3


User provided reference genes

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