Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G10421 Trifolium pratense HOM05D006262 ORTHO05D007266 1.3e-234 816.2 474 100.0
Medtr1g116540 Medicago truncatula HOM05D006262 ORTHO05D007266 7.5e-158 561.2 453 68.9
Ca_29592_v3 Cicer arietinum L. HOM05D006262 ORTHO05D007266 6.8e-151 538.1 443 69.8
Glyma.20G245900 Glycine max HOM05D006262 ORTHO05D007266 1.1e-132 477.6 427 63.0
Lj5g0018354 Lotus japonicus HOM05D006262 ORTHO05D007266 3.9e-130 469.2 438 61.6
Lalb_Chr02g0144321 Lupinus albus HOM05D006262 ORTHO05D007266 5.6e-129 465.3 453 58.7
Phvul.007G004000 Phaseolus vulgaris HOM05D006262 ORTHO05D007266 5.6e-129 465.3 424 61.1
VMungo0720G2273 Vigna mungo HOM05D006262 ORTHO05D007266 2.4e-124 449.9 433 59.4
Psat6g241480 Pisum sativum HOM05D006262 ORTHO05D007266 7.3e-121 438.3 442 60.0
Ca_11400_v3 Cicer arietinum L. HOM05D006262 ORTHO05D007266 1.2e-120 437.6 443 60.7
arahy.Tifrunner.gnm1.ann1.6Y9ITK Arachis hypogaea HOM05D006262 ORTHO05D007266 6.8e-119 431.8 417 59.7
arahy.Tifrunner.gnm1.ann1.BL35NN Arachis hypogaea HOM05D006262 ORTHO05D007266 2.2e-117 426.8 419 58.9
Ca_11403_v3 Cicer arietinum L. HOM05D006262 ORTHO05D007266 3.5e-115 419.5 428 60.3
QL10p047365 Quercus lobata HOM05D006262 ORTHO05D007266 2.4e-87 327.0 433 48.0
FvH4_4g11340 Fragaria vesca HOM05D006262 ORTHO05D007266 3.1e-87 326.6 424 47.6
RcHm_v2.0_Chr4g0407651 Rosa chinensis HOM05D006262 ORTHO05D007266 2.2e-85 320.5 433 46.7
Cfa015775 Carpinus fangiana HOM05D006262 ORTHO05D007266 6.4e-85 318.9 428 47.2
Prupe.1G187900 Prunus persica HOM05D006262 ORTHO05D007266 8.4e-85 318.5 422 46.2
CANSAT78G0581 Cannabis sativa HOM05D006262 ORTHO05D007266 1.4e-84 317.8 415 47.5
Potri.007G124600 Populus trichocarpa HOM05D006262 ORTHO05D007266 2.3e-82 310.5 429 43.8
Manes.04G048800 Manihot esculenta HOM05D006262 ORTHO05D007266 5.1e-82 309.3 392 46.9
TAR362G0090 Trochodendron aralioides HOM05D006262 ORTHO05D007266 1.1e-81 308.1 425 44.2
Sp4g25360 Schrenkiella parvula HOM05D006262 ORTHO05D007266 1.5e-81 307.8 393 47.3
Ciclev10020134m.g Citrus clementina HOM05D006262 ORTHO05D007266 4.3e-81 306.2 416 46.4
Carub.0004s2570 Capsella rubella HOM05D006262 ORTHO05D007266 7.4e-81 305.4 393 47.6
MD04G1038000 Malus domestica HOM05D006262 ORTHO05D007266 7.4e-81 305.4 421 46.3
CARHR138310 Cardamine hirsuta HOM05D006262 ORTHO05D007266 1.3e-80 304.7 392 46.7
A03p24130 Brassica napus HOM05D006262 ORTHO05D007266 3.7e-80 303.1 426 45.5
BraA03t11623Z Brassica rapa HOM05D006262 ORTHO05D007266 3.7e-80 303.1 426 45.5
TWI63G1082 Tripterygium wilfordii HOM05D006262 ORTHO05D007266 3.7e-80 303.1 446 43.7
Atru.chr3.1601 Acer truncatum HOM05D006262 ORTHO05D007266 4.8e-80 302.8 412 46.1
Atru.chr3.1609 Acer truncatum HOM05D006262 ORTHO05D007266 4.8e-80 302.8 412 46.1
CSS0049911 Camellia sinensis var. sinensis HOM05D006262 ORTHO05D007266 4.8e-80 302.8 408 43.6
Sabra07G0100700 Salix brachista HOM05D006262 ORTHO05D002297 8.2e-80 302.0 429 43.4
Thhalv10001453m.g Eutrema salsugineum HOM05D006262 ORTHO05D007266 1.1e-79 301.6 393 46.8
BcaB01g03403 Brassica carinata HOM05D006262 ORTHO05D007266 5.3e-79 299.3 393 46.8
ClCG07G015820 Citrullus lanatus HOM05D006262 ORTHO05D007266 6.9e-79 298.9 453 43.7
BolC3t15234H Brassica oleracea HOM05D006262 ORTHO05D007266 1.2e-78 298.1 413 45.0
Dinv22693 Davidia involucrata HOM05D006262 ORTHO05D007266 1.2e-78 298.1 404 44.1
C03p28720 Brassica napus HOM05D006262 ORTHO05D007266 1.5e-78 297.7 413 45.0
AT2G43235 Arabidopsis thaliana HOM05D006262 ORTHO05D007266 2.0e-78 297.4 387 47.0
AL4G41890 Arabidopsis lyrata HOM05D006262 ORTHO05D007266 2.6e-78 297.0 387 47.3
BcaC01g05249 Brassica carinata HOM05D006262 ORTHO05D007266 2.6e-78 297.0 426 44.8
Rhsim09G0030700 Rhododendron simsii HOM05D006262 ORTHO05D007266 1.3e-77 294.7 421 42.8
MELO3C017699.2 Cucumis melo HOM05D006262 ORTHO05D007266 6.5e-77 292.4 439 43.7
Duzib093G0344 Durio zibethinus HOM05D006262 ORTHO05D007266 8.4e-77 292.0 432 42.6
Aa31LG1G25040 Aethionema arabicum HOM05D006262 ORTHO05D007266 1.9e-76 290.8 408 45.3
Hma1.2p1_0597F.1_g186430 Hydrangea macrophylla HOM05D006262 ORTHO05D007266 1.6e-75 287.7 402 44.0
Sed0004128 Sechium edule HOM05D006262 ORTHO05D007266 3.5e-75 286.6 454 42.1
vmacro00601 Vaccinium macrocarpon HOM05D006262 ORTHO05D007266 3.5e-75 286.6 427 41.7
CsaV3_4G003530 Cucumis sativus L. HOM05D006262 ORTHO05D007266 1.0e-74 285.0 435 42.5
DCAR_023918 Daucus carota HOM05D006262 ORTHO05D007266 1.0e-74 285.0 393 43.0
ATR0743G268 Amborella trichopoda HOM05D006262 ORTHO05D007266 3.3e-73 280.0 407 43.2
COL.COLO4_14416 Corchorus olitorius HOM05D006262 ORTHO05D007266 5.7e-73 279.3 419 42.7
HanXRQChr15g0494811 Helianthus annuus HOM05D006262 ORTHO05D007266 1.6e-72 277.7 424 40.6
ECA238G4140 Erigeron canadensis HOM05D000005 ORTHO05D000012 2.2e-72 277.3 409 42.1
MBI08_g33651_MAGBIO Magnolia biondii HOM05D006262 ORTHO05D007266 2.8e-72 276.9 420 42.6
Thecc.05G002700 Theobroma cacao HOM05D006262 ORTHO05D007266 2.8e-72 276.9 423 43.3
PGR142G3389 Punica granatum HOM05D006262 ORTHO05D007266 3.7e-72 276.6 415 43.4
PSO675G4698 Papaver somniferum HOM05D006262 ORTHO05D007266 4.5e-70 269.6 399 41.9
Solyc09g098530.4 Solanum lycopersicum HOM05D006262 ORTHO05D007266 1.0e-69 268.5 430 40.2
Aqoxy2G04115 Aquilegia oxysepala HOM05D006262 ORTHO05D007266 2.9e-69 266.9 450 37.8
PSO017G4626 Papaver somniferum HOM05D006262 ORTHO05D007266 2.9e-69 266.9 398 42.0
Cc03_g13170 Coffea canephora HOM05D006262 ORTHO05D007266 8.5e-69 265.4 392 42.1
Sopen09g036450 Solanum pennellii HOM05D006262 ORTHO05D007266 8.5e-69 265.4 430 40.0
Gohir.A04G096300 Gossypium hirsutum HOM05D006262 ORTHO05D007266 2.1e-67 260.8 393 43.3
Gohir.D04G136100 Gossypium hirsutum HOM05D006262 ORTHO05D007266 3.6e-67 260.0 393 43.5
Gorai.012G119900 Gossypium raimondii HOM05D006262 ORTHO05D007266 4.6e-67 259.6 393 43.5
PGSC0003DMG400021613 Solanum tuberosum HOM05D006262 ORTHO05D007266 5.1e-66 256.1 432 40.3
Eucgr.A00253 Eucalyptus grandis HOM05D006262 ORTHO05D007266 6.7e-66 255.8 373 43.4
Lsat_1_v5_gn_2_51881 Lactuca sativa HOM05D006262 ORTHO05D007266 2.5e-65 253.8 446 37.0
MSTRG.24585 Avicennia marina HOM05D006262 ORTHO05D007266 3.3e-65 253.4 439 38.0
Haze_00720 Corylus avellana HOM05D006262 ORTHO05D007266 7.4e-65 252.3 518 38.2
Migut.N03113 Erythranthe guttata HOM05D006262 ORTHO05D007266 6.3e-64 249.2 399 38.3
Sc13g0007690 Simmondsia chinensis HOM05D006262 ORTHO05D007266 8.2e-64 248.8 401 40.9
Lj3A232G38 Lonicera japonica HOM05D006262 ORTHO05D007266 9.1e-63 245.4 427 39.8
Hund22599 Selenicereus undatus HOM05D006262 ORTHO05D007266 1.0e-61 241.9 392 39.5
EL10Ac3g06302 Beta vulgaris HOM05D006262 ORTHO05D007266 3.8e-61 240.0 406 39.2
SalBow6G1208 Salvia bowleyana HOM05D006262 ORTHO05D007266 1.4e-60 238.0 458 34.9
GSVIVG01013579001 Vitis vinifera HOM05D006262 ORTHO05D007266 4.2e-60 236.5 266 49.2
HPP92_024424 Vanilla planifolia HOM05D006262 ORTHO05D007266 1.2e-59 235.0 424 35.8
Nn1g09825 Nelumbo nucifera HOM05D006262 ORTHO05D007266 2.7e-59 233.8 406 37.4
Ah.07g204100 Amaranthus hybridus HOM05D006262 ORTHO05D007266 1.8e-58 231.1 391 38.6
Zm00001eb350760 Zea mays HOM05D006262 ORTHO05D007266 2.6e-57 227.3 387 39.3
CDE09G0849 Ceratophyllum demersum HOM05D006262 ORTHO05D007266 7.4e-57 225.7 311 41.8
Os05g0299200 Oryza sativa ssp. japonica HOM05D006262 ORTHO05D007266 2.4e-55 220.7 398 36.9
unitig_27.g25149 Utricularia gibba HOM05D006262 ORTHO05D007266 2.4e-55 220.7 391 38.4
Oeu029569.3 Olea europaea HOM05D006262 ORTHO05D007266 6.7e-50 202.6 449 33.9
SEGI_17174 Sequoiadendron giganteum HOM05D006262 ORTHO05D007266 1.1e-49 201.8 395 35.9
AagrBONN_evm.TU.Sc2ySwM_344.5117 Anthoceros agrestis HOM05D006262 ORTHO05D007266 2.0e-46 191.0 388 34.8
Nitab4.5_0002908g0080 Nicotiana tabacum HOM05D006262 ORTHO05D007266 5.9e-46 189.5 173 57.8
Nitab4.5_0001049g0110 Nicotiana tabacum HOM05D006262 ORTHO05D007266 2.5e-44 184.1 161 59.6
Peaxi162Scf00286g00119 Petunia axillaris HOM05D006262 ORTHO05D007266 3.2e-44 183.7 168 57.1
AUR62002605 Chenopodium quinoa HOM05D006262 ORTHO05D007266 1.3e-40 171.8 403 33.7
AUR62030023 Chenopodium quinoa HOM05D006262 ORTHO05D007266 6.3e-40 169.5 420 32.9
Hma1.2p1_0597F.1_g186420 Hydrangea macrophylla HOM05D006262 ORTHO05D007266 6.3e-40 169.5 130 66.2
Mapoly0004s0159 Marchantia polymorpha HOM05D006262 ORTHO05D007266 1.4e-39 168.3 391 29.9
CiPaw.01G102600 Carya illinoinensis HOM05D006262 ORTHO05D007266 1.6e-35 154.8 315 35.6
Pp3c12_3930 Physcomitrium patens HOM05D006262 ORTHO05D007266 2.1e-35 154.5 412 31.3
SMO351G0235 Selaginella moellendorffii HOM05D006262 ORTHO05D007266 1.4e-34 151.8 360 31.4
SGA_v2.0_scaffold31G12573 Striga asiatica HOM05D006262 ORTHO05D007266 2.3e-29 134.4 396 28.5
Pp3c9_3680 Physcomitrium patens HOM05D006262 ORTHO05D007266 2.1e-27 127.9 391 26.6
Cpa.g.sc71.30 Carica papaya HOM05D006262 ORTHO05D007266 3.7e-24 117.1 86 72.1
Glyma.10G295900 Glycine max HOM05D006262 ORTHO05D007266 1.8e-23 114.8 119 58.0
FAN17G0796 Fragaria x ananassa HOM05D006262 ORTHO05D007266 1.5e-20 105.1 75 68.0
MCO03G554 Micromonas commoda HOM05D006262 ORTHO05D007266 2.6e-17 94.4 188 34.6
Cpa.g.sc71.28 Carica papaya HOM05D006262 ORTHO05D007266 2.9e-16 90.9 179 33.0
CAN.G688.4 Capsicum annuum HOM05D006262 ORTHO05D007266 3.7e-16 90.5 75 60.0
PRCOL_00005486 Prasinoderma coloniale HOM05D006262 ORTHO05D007266 6.4e-16 89.7 188 33.5
QL09p046233 Quercus lobata HOM05D006262 ORTHO05D007266 6.4e-16 89.7 83 61.4
Peaxi162Scf00286g10017 Petunia axillaris HOM05D006262 ORTHO05D007266 1.1e-15 89.0 246 30.1
Nitab4.5_0001049g0100 Nicotiana tabacum HOM05D006262 ORTHO05D007266 1.3e-13 82.0 254 28.7
Nitab4.5_0002908g0070 Nicotiana tabacum HOM05D006262 ORTHO05D007266 3.9e-13 80.5 254 28.7
FAN07G2249 Fragaria x ananassa HOM05D006262 ORTHO05D007266 1.1e-12 79.0 46 82.6
FvH4_c17g00080 Fragaria vesca HOM05D006262 ORTHO05D007266 4.3e-12 77.0 51 74.5
Hma1.2p1_0597F.1_g186440 Hydrangea macrophylla HOM05D006262 ORTHO05D007266 6.2e-11 73.2 196 30.6
CAN.G51.2 Capsicum annuum HOM05D006262 ORTHO05D007266 1.5e-09 68.6 75 49.3
AagrBONN_evm.TU.Sc2ySwM_368.1862 Anthoceros agrestis HOM05D005935 ORTHO05D007012 2.6e-09 67.8 74 54.1
Cre01.g049900 Chlamydomonas reinhardtii HOM05D006262 ORTHO05D007266 1.3e-08 65.5 179 30.2
GSVIVG01020265001 Vitis vinifera HOM05D006262 ORTHO05D007266 4.9e-08 63.5 92 42.4
FAN07G1916 Fragaria x ananassa HOM05D006262 ORTHO05D007266 3.5e-06 57.4 45 62.2


User provided reference genes

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