Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G10356 Trifolium pratense HOM05D005975 ORTHO05D007373 0.0e+00 1286.2 647 100.0
Psat1g024880 Pisum sativum HOM05D005975 ORTHO05D007373 0.0e+00 1122.5 656 87.5
Ca_23135_v3 Cicer arietinum L. HOM05D005975 ORTHO05D007373 0.0e+00 1112.4 657 86.1
Lj1g0009400 Lotus japonicus HOM05D005975 ORTHO05D007373 0.0e+00 1087.0 657 84.2
Glyma.04G152200 Glycine max HOM05D005975 ORTHO05D007373 9.1e-308 1059.7 658 81.9
Glyma.06G210800 Glycine max HOM05D005975 ORTHO05D007373 1.3e-306 1055.8 658 82.1
Phvul.009G200500 Phaseolus vulgaris HOM05D005975 ORTHO05D007373 1.0e-303 1046.2 656 81.4
Lalb_Chr12g0197601 Lupinus albus HOM05D005975 ORTHO05D007373 6.3e-293 1010.4 656 78.0
Glyma.17G121100 Glycine max HOM05D005975 ORTHO05D007373 9.2e-292 1006.5 678 75.2
VMungo1309G0041 Vigna mungo HOM05D005975 ORTHO05D007373 7.0e-284 980.3 584 84.4
RcHm_v2.0_Chr7g0184651 Rosa chinensis HOM05D005975 ORTHO05D007373 2.7e-283 978.4 678 73.3
MD06G1211600 Malus domestica HOM05D005975 ORTHO05D007373 3.3e-281 971.5 676 72.9
MD14G1222100 Malus domestica HOM05D005975 ORTHO05D007373 2.8e-280 968.4 676 72.3
PGR083G1175 Punica granatum HOM05D005975 ORTHO05D007373 6.2e-280 967.2 656 74.7
Thecc.03G028700 Theobroma cacao HOM05D005975 ORTHO05D007373 8.0e-280 966.8 680 72.9
FvH4_5g12680 Fragaria vesca HOM05D005975 ORTHO05D007373 2.3e-279 965.3 675 72.9
Duzib205G1016 Durio zibethinus HOM05D005975 ORTHO05D007373 3.1e-279 964.9 679 73.0
FAN18G3396 Fragaria x ananassa HOM05D005975 ORTHO05D007373 1.2e-278 963.0 675 72.7
FAN08G0232 Fragaria x ananassa HOM05D005975 ORTHO05D007373 1.3e-277 959.5 676 72.8
Gohir.A11G007000 Gossypium hirsutum HOM05D005975 ORTHO05D007373 2.9e-277 958.4 680 72.1
Gorai.007G007400 Gossypium raimondii HOM05D005975 ORTHO05D007373 6.4e-277 957.2 682 72.0
Ciclev10019197m.g Citrus clementina HOM05D005975 ORTHO05D007373 8.3e-277 956.8 657 72.5
VMungo1215G0359 Vigna mungo HOM05D005975 ORTHO05D007373 1.9e-276 955.7 648 73.3
Gohir.D11G006100 Gossypium hirsutum HOM05D005975 ORTHO05D007373 2.4e-276 955.3 682 71.7
FAN13G1844 Fragaria x ananassa HOM05D005975 ORTHO05D007373 3.2e-276 954.9 683 71.4
FAN04G2679 Fragaria x ananassa HOM05D005975 ORTHO05D007373 5.4e-276 954.1 689 71.1
CiPaw.15G127100 Carya illinoinensis HOM05D005975 ORTHO05D007373 7.0e-276 953.7 695 71.7
Eucgr.B00701 Eucalyptus grandis HOM05D005975 ORTHO05D007373 3.3e-273 944.9 653 73.4
Rhsim08G0136800 Rhododendron simsii HOM05D005975 ORTHO05D007373 5.2e-271 937.6 660 72.0
TAR374G1293 Trochodendron aralioides HOM05D005975 ORTHO05D007373 5.2e-271 937.6 678 69.8
TAR622G0473 Trochodendron aralioides HOM05D005975 ORTHO05D007373 8.9e-271 936.8 679 69.5
Potri.015G049900 Populus trichocarpa HOM05D005975 ORTHO05D007373 2.0e-270 935.6 676 71.6
Manes.05G139300 Manihot esculenta HOM05D005975 ORTHO05D007373 3.4e-270 934.9 677 70.9
CSS0000913 Camellia sinensis var. sinensis HOM05D005975 ORTHO05D007373 5.8e-270 934.1 695 70.1
Hma1.2p1_0592F.1_g185285 Hydrangea macrophylla HOM05D005975 ORTHO05D007373 7.5e-270 933.7 673 71.8
Atru.chr9.776 Acer truncatum HOM05D005975 ORTHO05D007373 1.1e-268 929.9 620 74.7
Potri.012G060200 Populus trichocarpa HOM05D005975 ORTHO05D007373 3.2e-268 928.3 678 70.8
PSO063G1047 Papaver somniferum HOM05D005975 ORTHO05D007373 4.1e-268 927.9 652 71.3
PSO782G2585 Papaver somniferum HOM05D005975 ORTHO05D007373 1.3e-266 922.9 665 69.9
Sabra12G0043300 Salix brachista HOM05D005975 ORTHO05D007373 1.7e-266 922.5 655 72.4
AUR62032193 Chenopodium quinoa HOM05D005975 ORTHO05D007373 2.3e-266 922.2 651 71.6
AUR62036958 Chenopodium quinoa HOM05D005975 ORTHO05D007373 6.6e-266 920.6 655 71.1
GSVIVG01008239001 Vitis vinifera HOM05D005975 ORTHO05D007373 8.6e-266 920.2 634 73.2
Actinidia31028 Actinidia chinensis HOM05D005975 ORTHO05D007373 1.1e-265 919.8 649 71.8
ClCG06G015000 Citrullus lanatus HOM05D005975 ORTHO05D007373 3.3e-265 918.3 673 70.4
Thhalv10018286m.g Eutrema salsugineum HOM05D005975 ORTHO05D007373 5.6e-265 917.5 638 71.9
Peaxi162Scf00015g00726 Petunia axillaris HOM05D005975 ORTHO05D007373 1.2e-264 916.4 646 71.4
Haze_18619 Corylus avellana HOM05D005975 ORTHO05D007373 2.1e-264 915.6 601 76.2
MELO3C017289.2 Cucumis melo HOM05D005975 ORTHO05D007373 2.8e-264 915.2 669 70.3
Aqoxy3G03906 Aquilegia oxysepala HOM05D005975 ORTHO05D007373 6.2e-264 914.1 670 67.9
arahy.Tifrunner.gnm1.ann1.1K5T8S Arachis hypogaea HOM05D005975 ORTHO05D007373 1.4e-263 912.9 606 74.6
CARHR067040 Cardamine hirsuta HOM05D005975 ORTHO05D007373 1.4e-263 912.9 638 71.9
CsaV3_1G003650 Cucumis sativus L. HOM05D005975 ORTHO05D007373 2.4e-263 912.1 668 70.5
AL2G33760 Arabidopsis lyrata HOM05D005975 ORTHO05D007373 6.8e-263 910.6 639 71.2
Ah.11g047090 Amaranthus hybridus HOM05D005975 ORTHO05D007373 8.9e-263 910.2 631 71.0
AT1G73930 Arabidopsis thaliana HOM05D005975 ORTHO05D007373 8.9e-263 910.2 638 71.5
Hund10002 Selenicereus undatus HOM05D005975 ORTHO05D007373 1.5e-262 909.4 650 70.5
Sc10g0009550 Simmondsia chinensis HOM05D005975 ORTHO05D007373 1.5e-262 909.4 665 69.8
THA.LOC104808292 Tarenaya hassleriana HOM05D005975 ORTHO05D007373 2.6e-262 908.7 633 71.2
Cc04_g07500 Coffea canephora HOM05D005975 ORTHO05D007373 7.6e-262 907.1 672 68.9
DCAR_015134 Daucus carota HOM05D005975 ORTHO05D007373 7.6e-262 907.1 659 69.7
Solyc03g119750.4 Solanum lycopersicum HOM05D005975 ORTHO05D007373 2.9e-261 905.2 661 69.4
Nitab4.5_0001599g0180 Nicotiana tabacum HOM05D005975 ORTHO05D007373 3.8e-261 904.8 653 70.8
Sed0024013 Sechium edule HOM05D005975 ORTHO05D007373 6.4e-261 904.0 651 70.8
Hund02524 Selenicereus undatus HOM05D005975 ORTHO05D007373 2.4e-260 902.1 652 70.9
Dinv38586 Davidia involucrata HOM05D005975 ORTHO05D007373 1.2e-259 899.8 606 75.6
QL10p022556 Quercus lobata HOM05D005975 ORTHO05D007373 2.7e-259 898.7 610 74.4
PGSC0003DMG400005625 Solanum tuberosum HOM05D005975 ORTHO05D007373 3.5e-259 898.3 658 68.7
Sopen03g038600 Solanum pennellii HOM05D005975 ORTHO05D007373 4.6e-259 897.9 661 68.8
HanXRQChr09g0269781 Helianthus annuus HOM05D005975 ORTHO05D007373 5.6e-257 891.0 639 70.4
ECA232G0421 Erigeron canadensis HOM05D005975 ORTHO05D007373 1.2e-256 889.8 633 70.0
vmacro17674 Vaccinium macrocarpon HOM05D005975 ORTHO05D007373 4.7e-256 887.9 590 74.4
Nitab4.5_0000410g0070 Nicotiana tabacum HOM05D005975 ORTHO05D007373 8.1e-256 887.1 652 69.6
Cpa.g.sc549.1 Carica papaya HOM05D005975 ORTHO05D007373 3.1e-255 885.2 604 75.0
SGA_v2.0_scaffold25G10981 Striga asiatica HOM05D005975 ORTHO05D007373 9.0e-255 883.6 636 68.9
BcaB05g24819 Brassica carinata HOM05D005975 ORTHO05D007373 1.5e-254 882.9 641 68.3
Oeu024324.1 Olea europaea HOM05D005975 ORTHO05D007373 3.4e-254 881.7 633 70.0
A02p18950 Brassica napus HOM05D005975 ORTHO05D007373 4.4e-254 881.3 643 68.6
BraA02t06937Z Brassica rapa HOM05D005975 ORTHO05D007373 7.6e-254 880.6 642 68.4
BolC2t09180H Brassica oleracea HOM05D005975 ORTHO05D007373 4.9e-253 877.9 642 68.4
Sp5g29130 Schrenkiella parvula HOM05D005975 ORTHO05D007373 1.9e-252 875.9 634 69.7
BcaC03g15468 Brassica carinata HOM05D005975 ORTHO05D007373 4.2e-252 874.8 642 68.2
MBI19_g38388_MAGBIO Magnolia biondii HOM05D005975 ORTHO05D007373 9.3e-252 873.6 642 69.0
Aa31LG4G4220 Aethionema arabicum HOM05D005975 ORTHO05D007373 2.1e-251 872.5 633 70.1
C02p31490 Brassica napus HOM05D005975 ORTHO05D007373 3.0e-250 868.6 643 68.0
Prupe.5G217600 Prunus persica HOM05D005975 ORTHO05D007373 6.2e-248 860.9 543 79.6
Lsat_1_v5_gn_3_10441 Lactuca sativa HOM05D005975 ORTHO05D007373 6.9e-247 857.4 632 68.7
EL10Ac5g11254 Beta vulgaris HOM05D005975 ORTHO05D007373 9.9e-246 853.6 606 70.0
CAN.G438.116 Capsicum annuum HOM05D005975 ORTHO05D007373 3.2e-244 848.6 606 69.5
Migut.I00389 Erythranthe guttata HOM05D005975 ORTHO05D007373 3.5e-243 845.1 662 65.7
Lj9A429T54 Lonicera japonica HOM05D005975 ORTHO05D007373 1.3e-240 836.6 602 70.8
Phvul.003G176900 Phaseolus vulgaris HOM05D005975 ORTHO05D007373 1.2e-238 830.1 516 79.3
MSTRG.22940 Avicennia marina HOM05D005975 ORTHO05D007373 4.5e-238 828.2 610 68.5
ATR0753G136 Amborella trichopoda HOM05D005975 ORTHO05D007373 6.7e-234 814.3 742 58.4
Glyma.05G013100 Glycine max HOM05D005975 ORTHO05D007373 9.3e-228 793.9 655 65.2
Os03g0259700 Oryza sativa ssp. japonica HOM05D005975 ORTHO05D007373 4.6e-219 765.0 643 61.6
unitig_22.g6248 Utricularia gibba HOM05D005975 ORTHO05D007373 3.7e-216 755.4 659 60.1
Sabra15G0077800 Salix brachista HOM05D005975 ORTHO05D007373 4.2e-212 741.9 651 62.2
SalBow5G4970 Salvia bowleyana HOM05D005975 ORTHO05D007373 1.8e-210 736.5 650 60.0
SEGI_09157 Sequoiadendron giganteum HOM05D005975 ORTHO05D007373 1.4e-207 726.9 801 49.8
Pp3c4_11450 Physcomitrium patens HOM05D005975 ORTHO05D007373 5.5e-204 714.9 749 49.4
Pp3c12_18170 Physcomitrium patens HOM05D005975 ORTHO05D007373 2.7e-203 712.6 751 49.4
COL.COLO4_22722 Corchorus olitorius HOM05D005975 ORTHO05D007373 2.8e-200 702.6 472 76.5
Zm00001eb011310 Zea mays HOM05D005975 ORTHO05D007373 3.7e-200 702.2 590 61.0
Mapoly0016s0160 Marchantia polymorpha HOM05D005975 ORTHO05D007373 1.7e-197 693.3 846 45.3
AagrBONN_evm.TU.Sc2ySwM_228.4839 Anthoceros agrestis HOM05D005975 ORTHO05D007373 5.0e-197 691.8 812 47.7
Carub.0002s2070 Capsella rubella HOM05D005975 ORTHO05D007373 5.9e-190 668.3 461 73.1
SMO367G0788 Selaginella moellendorffii HOM05D005975 ORTHO05D007373 1.2e-177 627.5 636 51.6
Nn3g17719 Nelumbo nucifera HOM05D005975 ORTHO05D007373 1.2e-166 590.9 424 70.5
CDE05G1454 Ceratophyllum demersum HOM05D005975 ORTHO05D007373 1.3e-165 587.4 526 58.7
CBR_g30105 Chara braunii HOM05D005975 ORTHO05D007373 5.6e-156 555.4 548 52.2
TAR622G1340 Trochodendron aralioides HOM05D005975 ORTHO05D007373 1.3e-144 517.7 435 63.0
arahy.Tifrunner.gnm1.ann1.CEL6SJ Arachis hypogaea HOM05D005975 ORTHO05D007373 2.5e-119 433.7 263 80.6
CDE05G3359 Ceratophyllum demersum HOM05D005975 ORTHO05D007373 2.1e-118 430.6 379 61.7
PSO074G0001 Papaver somniferum HOM05D005975 ORTHO05D007373 3.7e-115 419.9 310 68.7
HPP92_016579 Vanilla planifolia HOM05D005975 ORTHO05D007373 2.5e-108 397.1 347 59.9
BcaB05g24817 Brassica carinata HOM05D005975 ORTHO05D007373 3.0e-93 347.1 215 76.7
HPP92_016580 Vanilla planifolia HOM05D005975 ORTHO05D007373 4.4e-92 343.2 242 70.2
Zm00001eb237870 Zea mays HOM05D005975 ORTHO05D007373 9.7e-84 315.5 535 39.1
SMO146G0145 Selaginella moellendorffii HOM05D005975 ORTHO05D007373 2.4e-82 310.8 343 49.0
Zm00001eb078910 Zea mays HOM05D005975 ORTHO05D007373 4.2e-63 246.9 155 72.9
Cre14.g633500 Chlamydomonas reinhardtii HOM05D005975 ORTHO05D007373 5.6e-39 166.8 439 29.6
CDE05G0573 Ceratophyllum demersum HOM05D005975 ORTHO05D007373 7.3e-39 166.4 121 67.8
Nn3g18207 Nelumbo nucifera HOM05D005975 ORTHO05D007373 6.4e-35 153.3 141 56.7
Nn4g23789 Nelumbo nucifera HOM05D005975 ORTHO05D007373 1.5e-12 79.0 150 33.3
Cfa019814 Carpinus fangiana HOM05D005975 ORTHO05D007373 8.7e-08 63.2 53 60.4
Dinv38585 Davidia involucrata HOM05D005975 ORTHO05D007373 3.3e-07 61.2 63 55.6
Lj9A429T53 Lonicera japonica HOM05D005975 ORTHO05D007373 3.7e-06 57.8 61 54.1
Potri.001G289250 Populus trichocarpa HOM05D005975 ORTHO05D007373 6.2e-06 57.0 48 58.3


User provided reference genes

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