Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G10330 Trifolium pratense HOM05D004345 ORTHO05D005192 0.0e+00 1829.7 893 100.0
Psat5g128760 Pisum sativum HOM05D004345 ORTHO05D005192 0.0e+00 1494.9 892 82.0
Medtr3g069120 Medicago truncatula HOM05D004345 ORTHO05D005192 0.0e+00 1438.7 898 81.1
Lj5g0026700 Lotus japonicus HOM05D004345 ORTHO05D005192 0.0e+00 1213.7 899 67.9
Glyma.10G030100 Glycine max HOM05D004345 ORTHO05D005192 0.0e+00 1165.6 902 66.7
Ca_09724_v3 Cicer arietinum L. HOM05D004345 ORTHO05D005192 0.0e+00 1147.5 769 75.0
Glyma.02G144000 Glycine max HOM05D004345 ORTHO05D005192 0.0e+00 1137.1 907 64.9
Phvul.011G090800 Phaseolus vulgaris HOM05D004345 ORTHO05D005192 0.0e+00 1096.6 904 63.7
Lalb_Chr21g0307461 Lupinus albus HOM05D004345 ORTHO05D005192 0.0e+00 1083.9 902 62.1
VMungo1215G1527 Vigna mungo HOM05D004345 ORTHO05D005192 6.1e-312 1073.5 887 63.1
VMungo1127G1998 Vigna mungo HOM05D004345 ORTHO05D005192 1.8e-311 1072.4 889 63.2
Prupe.2G050600 Prunus persica HOM05D004345 ORTHO05D005192 5.4e-250 868.2 923 52.2
MD04G1026400 Malus domestica HOM05D004345 ORTHO05D005192 8.6e-248 860.9 913 51.3
CiPaw.12G040000 Carya illinoinensis HOM05D004345 ORTHO05D005192 1.6e-246 856.7 929 51.6
Cfa020657 Carpinus fangiana HOM05D004345 ORTHO05D005192 4.1e-242 842.0 941 50.3
Manes.14G172500 Manihot esculenta HOM05D004345 ORTHO05D005192 1.3e-240 837.0 910 50.1
CiPaw.16G081600 Carya illinoinensis HOM05D004345 ORTHO05D005192 7.3e-239 831.2 931 49.9
FvH4_5g25850 Fragaria vesca HOM05D004345 ORTHO05D005192 3.1e-237 825.9 910 51.0
FAN18G0597 Fragaria x ananassa HOM05D004345 ORTHO05D005192 4.0e-237 825.5 910 51.0
FAN13G0999 Fragaria x ananassa HOM05D004345 ORTHO05D005192 5.2e-237 825.1 910 51.3
FAN04G0730 Fragaria x ananassa HOM05D004345 ORTHO05D005192 1.3e-235 820.5 908 50.8
Haze_18940 Corylus avellana HOM05D004345 ORTHO05D005192 8.6e-232 807.7 924 50.0
CANSAT21G1743 Cannabis sativa HOM05D004345 ORTHO05D005192 1.2e-230 803.9 924 48.5
QL09p016785 Quercus lobata HOM05D004345 ORTHO05D005192 3.4e-228 795.8 927 48.9
Potri.012G041300 Populus trichocarpa HOM05D004345 ORTHO05D005192 1.7e-227 793.5 910 47.9
QL07p000534 Quercus lobata HOM05D004345 ORTHO05D005192 1.2e-225 787.3 923 48.1
Sabra12G0028400 Salix brachista HOM05D004345 ORTHO05D005192 6.6e-224 781.6 912 47.4
CiPaw.12G046900 Carya illinoinensis HOM05D004345 ORTHO05D005192 4.0e-221 772.3 926 48.8
Gohir.A11G329500 Gossypium hirsutum HOM05D004345 ORTHO05D005192 1.2e-220 770.8 914 47.2
Gorai.007G379000 Gossypium raimondii HOM05D004345 ORTHO05D005192 6.4e-219 765.0 914 46.9
Sed0027926 Sechium edule HOM05D004345 ORTHO05D005192 6.6e-216 755.0 909 46.9
CsaV3_1G046170 Cucumis sativus L. HOM05D004345 ORTHO05D005192 1.5e-215 753.8 910 46.4
QL04p019450 Quercus lobata HOM05D004345 ORTHO05D005192 7.3e-215 751.5 902 48.0
MELO3C021732.2 Cucumis melo HOM05D004345 ORTHO05D005192 3.1e-213 746.1 911 46.7
TWI60G1145 Tripterygium wilfordii HOM05D004345 ORTHO05D005192 1.2e-212 744.2 913 47.4
Dinv36001 Davidia involucrata HOM05D004345 ORTHO05D005192 1.0e-208 731.1 890 47.5
Ciclev10000213m.g Citrus clementina HOM05D004345 ORTHO05D005192 3.0e-208 729.6 921 45.0
TWI31G0574 Tripterygium wilfordii HOM05D004345 ORTHO05D005192 2.4e-197 693.3 905 46.1
Actinidia34666 Actinidia chinensis HOM05D004345 ORTHO05D005192 3.1e-197 693.0 911 45.3
Gohir.D11G348700 Gossypium hirsutum HOM05D004345 ORTHO05D005192 3.0e-192 676.4 725 49.2
Lj8C411T10 Lonicera japonica HOM05D004345 ORTHO05D005192 2.8e-190 669.8 821 45.3
PGR044G2251 Punica granatum HOM05D004345 ORTHO05D005192 5.5e-186 655.6 904 44.1
Duzib116G0224 Durio zibethinus HOM05D004345 ORTHO05D005192 2.3e-184 650.2 932 42.5
Dinv35989 Davidia involucrata HOM05D004345 ORTHO05D004155 1.1e-183 647.9 890 44.0
Eucgr.C04176 Eucalyptus grandis HOM05D004345 ORTHO05D005192 1.1e-183 647.9 909 42.5
Nn1g01729 Nelumbo nucifera HOM05D004345 ORTHO05D005192 1.1e-183 647.9 955 41.4
Eucgr.K02289 Eucalyptus grandis HOM05D004345 ORTHO05D005192 4.2e-178 629.4 923 41.4
Hund17623 Selenicereus undatus HOM05D004345 ORTHO05D005192 2.3e-176 623.6 914 41.1
Rhsim12G0029000 Rhododendron simsii HOM05D004345 ORTHO05D005192 8.8e-176 621.7 815 44.4
CSS0030547 Camellia sinensis var. sinensis HOM05D004345 ORTHO05D005192 4.1e-173 612.8 776 44.7
RcHm_v2.0_Chr7g0216331 Rosa chinensis HOM05D004345 ORTHO05D005192 4.7e-169 599.4 901 40.7
EL10Ac9g22980 Beta vulgaris HOM05D000200 ORTHO05D001546 1.0e-168 598.2 912 39.7
SHI21683 Sapria himalayana HOM05D004345 ORTHO05D005192 1.8e-168 597.4 887 41.1
Lsat_1_v5_gn_8_70480 Lactuca sativa HOM05D004345 ORTHO05D005192 1.4e-165 587.8 927 38.2
AUR62032951 Chenopodium quinoa HOM05D004345 ORTHO05D005192 1.3e-163 581.3 912 39.0
HanXRQChr07g0196981 Helianthus annuus HOM05D004345 ORTHO05D005192 2.2e-163 580.5 917 38.3
vmacro01076 Vaccinium macrocarpon HOM05D004345 ORTHO05D005192 3.8e-163 579.7 891 41.1
CiPaw.12G047000 Carya illinoinensis HOM05D004345 ORTHO05D005192 1.9e-162 577.4 742 46.9
DCAR_009432 Daucus carota HOM05D004345 ORTHO05D005192 4.7e-161 572.8 918 38.3
Ah.01g012750 Amaranthus hybridus HOM05D004345 ORTHO05D005192 1.4e-160 571.2 909 39.8
Hund25524 Selenicereus undatus HOM05D004345 ORTHO05D005192 7.4e-159 565.5 922 39.4
MSTRG.24391 Avicennia marina HOM05D004345 ORTHO05D005192 9.1e-157 558.5 956 37.3
ECA238G4368 Erigeron canadensis HOM05D004345 ORTHO05D005192 5.4e-149 532.7 933 36.4
Migut.N02797 Erythranthe guttata HOM05D004345 ORTHO05D005192 3.5e-148 530.0 942 36.6
THA.LOC104803578 Tarenaya hassleriana HOM05D004345 ORTHO05D005192 6.5e-147 525.8 908 38.1
ECA234G4090 Erigeron canadensis HOM05D004345 ORTHO05D005192 1.2e-145 521.5 913 36.4
Ah.03g148550 Amaranthus hybridus HOM05D004345 ORTHO05D005192 2.1e-145 520.8 905 37.6
AL3G31560 Arabidopsis lyrata HOM05D004345 ORTHO05D005192 1.2e-143 515.0 916 37.1
SalBow3G2318 Salvia bowleyana HOM05D004345 ORTHO05D005192 4.9e-142 509.6 920 36.2
AT3G18310 Arabidopsis thaliana HOM05D004345 ORTHO05D005192 6.3e-142 509.2 888 36.9
Nitab4.5_0001423g0010 Nicotiana tabacum HOM05D004345 ORTHO05D005192 1.1e-141 508.4 914 37.5
Nitab4.5_0008354g0010 Nicotiana tabacum HOM05D004345 ORTHO05D005192 2.4e-141 507.3 935 37.6
Solyc01g098450.4 Solanum lycopersicum HOM05D004345 ORTHO05D005192 1.2e-140 505.0 927 36.4
Aqoxy4G03088 Aquilegia oxysepala HOM05D004345 ORTHO05D005192 2.7e-140 503.8 922 35.7
Sopen01g042020 Solanum pennellii HOM05D004345 ORTHO05D005192 7.7e-140 502.3 930 37.0
Peaxi162Scf00434g00066 Petunia axillaris HOM05D004345 ORTHO05D005192 3.8e-139 500.0 928 36.4
Carub.0003s1810 Capsella rubella HOM05D004345 ORTHO05D005192 8.6e-139 498.8 894 36.9
Aa31LG8G3600 Aethionema arabicum HOM05D004345 ORTHO05D005192 3.3e-138 496.9 875 37.1
Aqoxy4G01527 Aquilegia oxysepala HOM05D004345 ORTHO05D005192 5.6e-138 496.1 936 34.9
CARHR093680 Cardamine hirsuta HOM05D004345 ORTHO05D005192 4.0e-136 490.0 916 35.6
Thhalv10020051m.g Eutrema salsugineum HOM05D004345 ORTHO05D005192 5.7e-135 486.1 890 36.2
Cc07_g15690 Coffea canephora HOM05D004345 ORTHO05D005192 3.7e-134 483.4 955 36.1
Nitab4.5_0001903g0100 Nicotiana tabacum HOM05D004345 ORTHO05D005192 4.1e-133 479.9 895 36.9
Sp3g16450 Schrenkiella parvula HOM05D004345 ORTHO05D005192 1.9e-130 471.1 884 36.0
BolC5t33472H Brassica oleracea HOM05D004345 ORTHO05D005192 3.6e-129 466.8 885 34.8
C05p47630 Brassica napus HOM05D004345 ORTHO05D005192 8.0e-129 465.7 899 34.5
BraA05t21971Z Brassica rapa HOM05D004345 ORTHO05D005192 3.1e-128 463.8 883 34.9
A05p31330 Brassica napus HOM05D004345 ORTHO05D005192 7.5e-127 459.1 883 34.5
Dinv39346 Davidia involucrata HOM05D004345 ORTHO05D005192 6.6e-123 446.0 806 38.2
Thhalv10003730m.g Eutrema salsugineum HOM05D004345 ORTHO05D005192 3.3e-114 417.2 760 35.1
PSO210G0907 Papaver somniferum HOM05D004345 ORTHO05D005192 1.6e-113 414.8 924 33.1
unitig_744.g24116 Utricularia gibba HOM05D004345 ORTHO05D005192 4.7e-113 413.3 925 31.7
MBI07_g11743_MAGBIO Magnolia biondii HOM05D004345 ORTHO05D005192 5.2e-112 409.8 836 34.2
Thecc.05G018000 Theobroma cacao HOM05D004345 ORTHO05D005192 5.4e-109 399.8 655 38.5
Oeu031657.1 Olea europaea HOM05D004345 ORTHO05D005192 6.8e-104 382.9 537 42.1
QL07p001298 Quercus lobata HOM05D004345 ORTHO05D005192 7.1e-101 372.9 847 33.4
Cpa.g.sc4881.1 Carica papaya HOM05D004345 ORTHO05D005192 1.4e-96 358.6 573 38.0
ATR0691G134 Amborella trichopoda HOM05D004345 ORTHO05D005192 2.0e-95 354.8 966 31.3
TAR383G0351 Trochodendron aralioides HOM05D004345 ORTHO05D005192 2.4e-93 347.8 402 46.3
HPP92_000827 Vanilla planifolia HOM05D004345 ORTHO05D005192 2.4e-93 347.8 932 30.9
Cpa.g.sc3060.1 Carica papaya HOM05D004345 ORTHO05D005192 1.3e-91 342.0 907 30.5
COL.COLO4_14552 Corchorus olitorius HOM05D004345 ORTHO05D005192 1.2e-87 328.9 428 44.2
CDE12G0342 Ceratophyllum demersum HOM05D004345 ORTHO05D005192 3.4e-87 327.4 668 33.4
C05p47510 Brassica napus HOM05D004345 ORTHO05D005192 6.0e-84 316.6 516 35.9
Os03g0240400 Oryza sativa ssp. japonica HOM05D004345 ORTHO05D005192 2.1e-76 291.6 943 27.5
Zm00001eb399070 Zea mays HOM05D004345 ORTHO05D005192 1.8e-75 288.5 929 28.1
CDE09G0455 Ceratophyllum demersum HOM05D004345 ORTHO05D005192 1.1e-72 279.3 632 30.7
Aqoxy7G01729 Aquilegia oxysepala HOM05D004345 ORTHO05D005192 1.4e-72 278.9 474 37.6
Os09g0104700 Oryza sativa ssp. japonica HOM05D004345 ORTHO05D005192 3.2e-69 267.7 935 26.6
PSO210G0382 Papaver somniferum HOM05D004345 ORTHO05D005192 2.0e-63 248.4 524 33.2
ATR0446G001 Amborella trichopoda HOM05D004345 ORTHO05D005192 5.9e-63 246.9 794 29.8
PSO384G0273 Papaver somniferum HOM05D004345 ORTHO05D005192 2.5e-61 241.5 500 33.4
BcaB01g01503 Brassica carinata HOM05D004345 ORTHO05D005192 5.3e-56 223.8 347 36.0
PSO384G0711 Papaver somniferum HOM05D004345 ORTHO05D005192 2.3e-51 208.4 438 33.1
ATR1192G001 Amborella trichopoda HOM05D004345 ORTHO05D005192 8.8e-51 206.5 445 33.9
RcHm_v2.0_Chr6g0264721 Rosa chinensis HOM05D004345 ORTHO05D005192 2.8e-49 201.4 201 55.7
QL07p000983 Quercus lobata HOM05D004345 ORTHO05D005192 4.5e-47 194.1 176 56.8
BcaC05g28685 Brassica carinata HOM05D004345 ORTHO05D005192 1.7e-46 192.2 289 39.4
SEGI_03816 Sequoiadendron giganteum HOM05D004345 ORTHO05D005192 2.2e-46 191.8 741 27.4
Psat5g200920 Pisum sativum HOM05D000856 ORTHO05D005192 3.8e-46 191.0 114 79.8
MBI07_g44810_MAGBIO Magnolia biondii HOM05D004345 ORTHO05D005192 1.2e-44 186.0 474 30.6
ATR0022G053 Amborella trichopoda HOM05D004345 ORTHO05D005192 1.6e-44 185.7 432 33.1
Medtr1g071240 Medicago truncatula HOM05D000001 ORTHO05D000003 4.4e-42 177.6 180 58.3
THA.LOC104807021 Tarenaya hassleriana HOM05D004345 ORTHO05D005192 4.5e-39 167.5 298 40.3
MBI07_g37626_MAGBIO Magnolia biondii HOM05D004345 ORTHO05D005192 3.8e-38 164.5 474 29.7
PSO407G0063 Papaver somniferum HOM05D004345 ORTHO05D005192 1.8e-35 155.6 321 33.0
BolC5t33532H Brassica oleracea HOM05D004345 ORTHO05D005192 3.0e-35 154.8 251 37.1
ATR0661G336 Amborella trichopoda HOM05D004345 ORTHO05D005192 4.8e-33 147.5 525 27.8
BcaB06g25876 Brassica carinata HOM05D004345 ORTHO05D005192 1.8e-32 145.6 199 39.7
Gohir.D11G289900 Gossypium hirsutum HOM05D004345 ORTHO05D005192 5.4e-32 144.1 153 47.7
Gorai.007G313800 Gossypium raimondii HOM05D004345 ORTHO05D005192 1.6e-31 142.5 153 47.1
Psat6g058760 Pisum sativum HOM05D004345 ORTHO05D005192 1.3e-30 139.4 125 60.8
A05p31320 Brassica napus HOM05D004345 ORTHO05D005192 6.5e-30 137.1 302 29.1
BraA05t21970Z Brassica rapa HOM05D004345 ORTHO05D005192 6.5e-30 137.1 302 29.1
SMO203G0127 Selaginella moellendorffii HOM05D004345 ORTHO05D005192 1.5e-26 125.9 582 23.7
ATR0792G001 Amborella trichopoda HOM05D004345 ORTHO05D005192 2.2e-25 122.1 394 28.4
Pp3c14_24820 Physcomitrium patens HOM05D004345 ORTHO05D005192 4.1e-24 117.9 515 25.4
ATR0964G004 Amborella trichopoda HOM05D004345 ORTHO05D005192 1.2e-23 116.3 393 28.2
SMO297G0008 Selaginella moellendorffii HOM05D004345 ORTHO05D005192 3.5e-23 114.8 553 22.8
RcHm_v2.0_Chr6g0264731 Rosa chinensis HOM05D004345 ORTHO05D005192 5.0e-22 110.9 139 43.9
AagrBONN_evm.TU.Sc2ySwM_344.4665 Anthoceros agrestis HOM05D004345 ORTHO05D005192 2.8e-20 105.1 391 24.0
ATR0560G006 Amborella trichopoda HOM05D004345 ORTHO05D005192 7.5e-18 97.1 217 34.1
Sc22g0003820 Simmondsia chinensis HOM05D004345 ORTHO05D005192 7.0e-16 90.5 189 39.2
SEGI_28583 Sequoiadendron giganteum HOM05D004345 ORTHO05D005192 1.0e-14 86.7 414 23.9
Oeu011014.1 Olea europaea HOM05D004345 ORTHO05D005192 2.3e-11 75.5 141 36.2
Oeu028553.1 Olea europaea HOM05D004345 ORTHO05D005192 8.9e-11 73.6 141 35.5
ATR0661G406 Amborella trichopoda HOM05D004345 ORTHO05D005192 1.7e-09 69.3 233 28.3
ATR0194G001 Amborella trichopoda HOM05D004345 ORTHO05D005192 2.2e-09 68.9 320 25.0
Sc14g0004510 Simmondsia chinensis HOM05D004345 ORTHO05D005192 1.2e-07 63.2 114 37.7
ATR0560G003 Amborella trichopoda HOM05D004345 ORTHO05D005192 2.0e-07 62.4 190 28.4
PGSC0003DMG403028564 Solanum tuberosum HOM05D004345 ORTHO05D005192 3.9e-06 58.2 139 31.7


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