Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G10281 Trifolium pratense HOM05D006063 ORTHO05D000023 1.4e-173 612.8 300 100.0
Medtr1g079470 Medicago truncatula HOM05D006063 ORTHO05D000023 2.1e-134 482.6 300 82.3
Ca_09979_v3 Cicer arietinum L. HOM05D006063 ORTHO05D000023 4.9e-123 444.9 305 73.1
Ca_09995_v3 Cicer arietinum L. HOM05D006063 ORTHO05D000023 4.9e-123 444.9 305 73.1
Lj3g0014127 Lotus japonicus HOM05D006063 ORTHO05D000023 2.2e-94 349.7 326 56.4
Glyma.10G169000 Glycine max HOM05D006063 ORTHO05D000023 2.7e-89 332.8 337 55.2
Phvul.L001648 Phaseolus vulgaris HOM05D006063 ORTHO05D000023 4.4e-87 325.5 330 54.5
VMungo0720G1344 Vigna mungo HOM05D006063 ORTHO05D000023 1.4e-85 320.5 330 52.7
Lalb_Chr21g0311331 Lupinus albus HOM05D006063 ORTHO05D000023 5.0e-83 312.0 325 55.1
arahy.Tifrunner.gnm1.ann1.2N7XA4 Arachis hypogaea HOM05D006063 ORTHO05D000023 2.6e-79 299.7 335 50.1
arahy.Tifrunner.gnm1.ann1.JVQ2Z4 Arachis hypogaea HOM05D006063 ORTHO05D000023 2.6e-79 299.7 335 50.1
Prupe.6G355400 Prunus persica HOM05D006063 ORTHO05D000023 1.1e-58 231.1 367 40.6
MD04G1235500 Malus domestica HOM05D006063 ORTHO05D000023 9.8e-55 218.0 367 39.2
CANSAT54G1152 Cannabis sativa HOM05D006063 ORTHO05D000023 4.6e-52 209.1 372 37.9
Psat6g141160 Pisum sativum HOM05D006063 ORTHO05D000023 1.7e-51 207.2 127 82.7
Aa31LG5G14700 Aethionema arabicum HOM05D006063 ORTHO05D000023 1.0e-48 198.0 356 37.6
FAN09G4822 Fragaria x ananassa HOM05D006063 ORTHO05D000023 1.8e-48 197.2 345 38.0
Actinidia34754 Actinidia chinensis HOM05D006063 ORTHO05D000023 2.3e-48 196.8 338 39.1
Carub.0003s0342 Capsella rubella HOM05D006063 ORTHO05D000023 2.3e-48 196.8 356 37.1
ClCG03G011330 Citrullus lanatus HOM05D006063 ORTHO05D000023 4.0e-48 196.1 374 35.3
Cpa.g.sc51.61 Carica papaya HOM05D006063 ORTHO05D000023 5.2e-48 195.7 383 33.9
Eucgr.H04160 Eucalyptus grandis HOM05D006063 ORTHO05D000023 6.8e-48 195.3 361 38.0
Gohir.D13G106000 Gossypium hirsutum HOM05D006063 ORTHO05D000023 6.8e-48 195.3 370 35.9
MBI07_g04744_MAGBIO Magnolia biondii HOM05D006063 ORTHO05D000023 1.5e-47 194.1 341 37.2
Thecc.05G261400 Theobroma cacao HOM05D006063 ORTHO05D000023 2.0e-47 193.7 364 37.1
FAN02G3689 Fragaria x ananassa HOM05D006063 ORTHO05D000023 2.6e-47 193.4 345 36.8
Gorai.013G118800 Gossypium raimondii HOM05D006063 ORTHO05D000023 5.8e-47 192.2 370 35.9
Rhsim09G0137100 Rhododendron simsii HOM05D006063 ORTHO05D000023 9.8e-47 191.4 364 38.5
Thhalv10020148m.g Eutrema salsugineum HOM05D006063 ORTHO05D000023 1.7e-46 190.7 369 36.3
FvH4_6g01260 Fragaria vesca HOM05D006063 ORTHO05D000023 2.9e-46 189.9 345 35.9
Sabra19G0039200 Salix brachista HOM05D006063 ORTHO05D000023 3.7e-46 189.5 360 36.4
Hund07147 Selenicereus undatus HOM05D006063 ORTHO05D000023 3.7e-46 189.5 369 35.8
Potri.019G029400 Populus trichocarpa HOM05D006063 ORTHO05D000023 8.3e-46 188.3 359 36.5
CsaV3_1G044890 Cucumis sativus L. HOM05D006063 ORTHO05D000023 1.1e-45 188.0 367 35.7
FAN05G0856 Fragaria x ananassa HOM05D006063 ORTHO05D000023 1.4e-45 187.6 356 35.7
Sp3g03130 Schrenkiella parvula HOM05D006063 ORTHO05D000023 1.4e-45 187.6 374 36.6
Sabra19G0036100 Salix brachista HOM05D006063 ORTHO05D000023 5.4e-45 185.7 360 35.8
THA.LOC104820746 Tarenaya hassleriana HOM05D006063 ORTHO05D000023 5.4e-45 185.7 374 32.6
vmacro10365 Vaccinium macrocarpon HOM05D006063 ORTHO05D000023 5.4e-45 185.7 362 35.9
BcaB04g19349 Brassica carinata HOM05D006063 ORTHO05D000023 9.2e-45 184.9 335 36.1
CSS0004581 Camellia sinensis var. sinensis HOM05D006063 ORTHO05D000023 9.2e-45 184.9 412 35.9
AT3G04160 Arabidopsis thaliana HOM05D006063 ORTHO05D000023 1.2e-44 184.5 372 35.5
EL10Ac4g09796 Beta vulgaris HOM05D006063 ORTHO05D000023 1.2e-44 184.5 370 35.7
TWI34G0066 Tripterygium wilfordii HOM05D006063 ORTHO05D000023 1.6e-44 184.1 381 34.6
Lsat_1_v5_gn_9_46040 Lactuca sativa HOM05D006063 ORTHO05D000023 2.0e-44 183.7 348 37.9
TAR362G1155 Trochodendron aralioides HOM05D006063 ORTHO05D000023 3.5e-44 183.0 374 36.1
MELO3C010119.2 Cucumis melo HOM05D006063 ORTHO05D000023 4.6e-44 182.6 372 34.1
CAN.G4.18 Capsicum annuum HOM05D006063 ORTHO05D000023 6.0e-44 182.2 343 34.7
Manes.09G145100 Manihot esculenta HOM05D006063 ORTHO05D000023 7.8e-44 181.8 362 34.0
Ciclev10019009m.g Citrus clementina HOM05D006063 ORTHO05D000023 1.3e-43 181.0 364 35.4
PSO017G2613 Papaver somniferum HOM05D006063 ORTHO05D000023 1.7e-43 180.6 364 37.4
Hma1.2p1_0153F.1_g067880 Hydrangea macrophylla HOM05D006063 ORTHO05D000023 3.0e-43 179.9 369 35.0
PSO063G1700 Papaver somniferum HOM05D006063 ORTHO05D000023 3.0e-43 179.9 364 36.8
SHI14775 Sapria himalayana HOM05D006063 ORTHO05D000023 3.9e-43 179.5 355 34.4
SalBow1G1068 Salvia bowleyana HOM05D006063 ORTHO05D000023 5.0e-43 179.1 372 34.9
HanXRQChr15g0491401 Helianthus annuus HOM05D006063 ORTHO05D000023 6.6e-43 178.7 334 38.3
A03p33520 Brassica napus HOM05D006063 ORTHO05D000023 8.6e-43 178.3 321 37.1
Sed0026121 Sechium edule HOM05D006063 ORTHO05D000023 8.6e-43 178.3 375 34.7
AL3G14090 Arabidopsis lyrata HOM05D006063 ORTHO05D000023 1.1e-42 177.9 365 35.3
Cc09_g03150 Coffea canephora HOM05D006063 ORTHO05D000023 1.1e-42 177.9 361 35.5
CARHR078300 Cardamine hirsuta HOM05D006063 ORTHO05D000023 1.9e-42 177.2 364 33.8
CiPaw.07G075500 Carya illinoinensis HOM05D006063 ORTHO05D000023 1.9e-42 177.2 344 38.1
Dinv03784 Davidia involucrata HOM05D006063 ORTHO05D000023 1.9e-42 177.2 333 36.0
PGSC0003DMG400015112 Solanum tuberosum HOM05D006063 ORTHO05D000023 4.3e-42 176.0 346 35.5
Atru.chr2.1232 Acer truncatum HOM05D006063 ORTHO05D000023 7.3e-42 175.3 303 40.3
SalBow1G3325 Salvia bowleyana HOM05D006063 ORTHO05D000023 9.5e-42 174.9 369 34.1
Sopen04g021710 Solanum pennellii HOM05D006063 ORTHO05D000023 1.2e-41 174.5 345 35.4
SGA_v2.0_scaffold62G21476 Striga asiatica HOM05D006063 ORTHO05D000023 1.2e-41 174.5 362 34.8
Peaxi162Scf00071g01413 Petunia axillaris HOM05D006063 ORTHO05D000023 4.7e-41 172.6 347 36.0
Solyc04g050760.4 Solanum lycopersicum HOM05D006063 ORTHO05D000023 6.2e-41 172.2 345 34.8
BraA03t12527Z Brassica rapa HOM05D006063 ORTHO05D000023 1.4e-40 171.0 321 36.1
C03p40730 Brassica napus HOM05D006063 ORTHO05D000023 2.3e-40 170.2 321 36.1
Nitab4.5_0000504g0070 Nicotiana tabacum HOM05D006063 ORTHO05D000023 4.0e-40 169.5 348 34.2
Migut.F02045 Erythranthe guttata HOM05D006063 ORTHO05D000023 1.2e-39 167.9 374 32.6
AUR62005299 Chenopodium quinoa HOM05D006063 ORTHO05D000765 3.4e-39 166.4 353 36.5
BcaC01g04385 Brassica carinata HOM05D006063 ORTHO05D000023 7.5e-39 165.2 323 36.5
BolC3t16339H Brassica oleracea HOM05D006063 ORTHO05D000023 9.8e-39 164.9 321 35.2
Haze_04487 Corylus avellana HOM05D006063 ORTHO05D000023 1.7e-38 164.1 281 38.8
Nitab4.5_0004201g0010 Nicotiana tabacum HOM05D006063 ORTHO05D000023 8.3e-38 161.8 346 34.4
ATR0618G015 Amborella trichopoda HOM05D006063 ORTHO05D000023 2.4e-37 160.2 391 31.7
Aqoxy2G04022 Aquilegia oxysepala HOM05D006063 ORTHO05D000023 3.2e-37 159.8 375 32.0
MSTRG.9222 Avicennia marina HOM05D006063 ORTHO05D000023 2.7e-36 156.8 370 33.8
Sc16g0010060 Simmondsia chinensis HOM05D006063 ORTHO05D000023 3.5e-36 156.4 372 32.0
Lj2A50T27 Lonicera japonica HOM05D006063 ORTHO05D000023 9.5e-34 148.3 265 35.1
QL07p027196 Quercus lobata HOM05D006063 ORTHO05D000023 1.2e-33 147.9 325 32.6
CDE05G2869 Ceratophyllum demersum HOM05D006063 ORTHO05D000023 6.4e-30 135.6 209 38.3
MBI18_g19284_MAGBIO Magnolia biondii HOM05D006063 ORTHO05D000023 1.3e-27 127.9 259 32.4
FAN05G5389 Fragaria x ananassa HOM05D006063 ORTHO05D000023 2.3e-27 127.1 215 36.3
Oeu010183.1 Olea europaea HOM05D006063 ORTHO05D000023 3.3e-26 123.2 272 32.4
HPP92_006232 Vanilla planifolia HOM05D006063 ORTHO05D000023 2.9e-22 110.2 196 34.2
Gohir.A13G102800 Gossypium hirsutum HOM05D006063 ORTHO05D000023 1.1e-21 108.2 204 35.3
Mapoly0001s0430 Marchantia polymorpha HOM05D006063 ORTHO05D000023 2.5e-18 97.1 248 30.2
SMO351G0027 Selaginella moellendorffii HOM05D006063 ORTHO05D000023 8.1e-17 92.0 317 29.0
TPR.G31594 Trifolium pratense HOM05D006063 ORTHO05D000023 1.1e-16 91.7 74 71.6
Zm00001eb086400 Zea mays HOM05D006063 ORTHO05D000023 1.1e-16 91.7 269 30.5
AagrBONN_evm.TU.Sc2ySwM_362.520 Anthoceros agrestis HOM05D006063 ORTHO05D000023 4.2e-13 79.7 223 27.4
RcHm_v2.0_Chr3g0448831 Rosa chinensis HOM05D006063 ORTHO05D000023 5.4e-13 79.3 150 36.7
C05p62930 Brassica napus HOM05D000005 ORTHO05D000294 1.6e-12 77.8 106 43.4
CSS0046279 Camellia sinensis var. sinensis HOM05D006063 ORTHO05D000023 2.1e-12 77.4 241 31.1
RcHm_v2.0_Chr3g0448821 Rosa chinensis HOM05D006063 ORTHO05D000023 3.5e-12 76.6 158 38.6
Cpa.g.sc51.65 Carica papaya HOM05D006063 ORTHO05D000023 1.3e-11 74.7 109 41.3
MBI18_g46979_MAGBIO Magnolia biondii HOM05D006063 ORTHO05D000023 8.7e-11 72.0 131 33.6
ECA232G4499 Erigeron canadensis HOM05D006063 ORTHO05D000023 1.3e-09 68.2 128 35.9
Pp3c17_4760 Physcomitrium patens HOM05D006063 ORTHO05D000023 1.3e-09 68.2 346 23.1
A05p43190 Brassica napus HOM05D006063 ORTHO05D000023 4.8e-09 66.2 108 37.0
Os04g0349401 Oryza sativa ssp. japonica HOM05D006063 ORTHO05D000023 3.1e-08 63.5 170 29.4


User provided reference genes

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