Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G10279 Trifolium pratense HOM05D006391 ORTHO05D007767 5.1e-213 744.2 389 100.0
Medtr1g079830 Medicago truncatula HOM05D006391 ORTHO05D007767 3.6e-182 641.7 398 87.4
Ca_10006_v3 Cicer arietinum L. HOM05D006391 ORTHO05D007767 1.9e-175 619.4 401 84.0
Lj5g0002062 Lotus japonicus HOM05D006391 ORTHO05D007767 5.5e-167 591.3 393 81.2
Glyma.20G222100 Glycine max HOM05D006391 ORTHO05D007767 8.0e-166 587.4 403 80.4
Glyma.10G167000 Glycine max HOM05D006391 ORTHO05D007767 8.0e-158 560.8 406 76.6
VMungo0720G1212 Vigna mungo HOM05D006391 ORTHO05D007767 5.2e-157 558.1 417 74.6
Phvul.L001863 Phaseolus vulgaris HOM05D006391 ORTHO05D007767 1.8e-154 549.7 419 74.0
Lalb_Chr21g0311261 Lupinus albus HOM05D006391 ORTHO05D007767 1.0e-152 543.9 396 75.0
arahy.Tifrunner.gnm1.ann1.DTTE32 Arachis hypogaea HOM05D006391 ORTHO05D007767 4.0e-149 531.9 405 73.1
arahy.Tifrunner.gnm1.ann1.9EWV20 Arachis hypogaea HOM05D006391 ORTHO05D007767 3.4e-148 528.9 405 72.6
Potri.013G044600 Populus trichocarpa HOM05D006391 ORTHO05D007767 8.6e-136 487.6 405 66.4
Sabra13G0041000 Salix brachista HOM05D006391 ORTHO05D007767 3.3e-135 485.7 409 66.5
Cfa006327 Carpinus fangiana HOM05D006391 ORTHO05D007767 4.7e-134 481.9 409 66.3
CANSAT54G0018 Cannabis sativa HOM05D006391 ORTHO05D007767 4.0e-133 478.8 400 66.8
CiPaw.07G078100 Carya illinoinensis HOM05D006391 ORTHO05D007767 8.9e-133 477.6 407 67.1
Eucgr.H04256 Eucalyptus grandis HOM05D006391 ORTHO05D007767 1.2e-132 477.2 408 66.2
Atru.chr2.892 Acer truncatum HOM05D006391 ORTHO05D007767 3.4e-132 475.7 404 65.6
Nn1g02693 Nelumbo nucifera HOM05D006391 ORTHO05D007767 6.4e-131 471.5 405 64.0
Gohir.A11G251400 Gossypium hirsutum HOM05D006391 ORTHO05D007767 2.4e-130 469.5 408 63.5
Thecc.05G276300 Theobroma cacao HOM05D006391 ORTHO05D007767 2.4e-130 469.5 409 65.0
Prupe.6G348300 Prunus persica HOM05D006391 ORTHO05D007767 4.1e-130 468.8 424 62.0
COL.COLO4_15424 Corchorus olitorius HOM05D006391 ORTHO05D007767 1.2e-129 467.2 409 63.8
PGR004G0019 Punica granatum HOM05D006391 ORTHO05D007767 2.7e-129 466.1 416 64.4
QL03p031977 Quercus lobata HOM05D006391 ORTHO05D007767 2.7e-129 466.1 410 65.9
Gohir.D11G261800 Gossypium hirsutum HOM05D006391 ORTHO05D007767 4.6e-129 465.3 409 62.8
CsaV3_1G045530 Cucumis sativus L. HOM05D006391 ORTHO05D007767 6.0e-129 464.9 403 65.8
Gorai.007G280500 Gossypium raimondii HOM05D006391 ORTHO05D007767 7.8e-129 464.5 409 62.6
MD12G1245500 Malus domestica HOM05D006391 ORTHO05D007767 1.3e-128 463.8 429 62.5
Sc09g0004120 Simmondsia chinensis HOM05D006391 ORTHO05D007767 1.7e-128 463.4 415 63.1
Manes.08G137500 Manihot esculenta HOM05D006391 ORTHO05D007767 3.3e-127 459.1 407 64.1
TWI56G1126 Tripterygium wilfordii HOM05D006391 ORTHO05D007767 1.4e-125 453.8 398 63.3
Lj2A39G66 Lonicera japonica HOM05D006391 ORTHO05D007767 1.8e-125 453.4 358 68.4
Actinidia06783 Actinidia chinensis HOM05D006391 ORTHO05D007767 2.3e-125 453.0 405 62.5
RcHm_v2.0_Chr3g0450061 Rosa chinensis HOM05D006391 ORTHO05D007767 8.9e-125 451.1 436 60.3
Ciclev10020524m.g Citrus clementina HOM05D006391 ORTHO05D007767 2.0e-124 449.9 396 64.4
Duzib177G0389 Durio zibethinus HOM05D006391 ORTHO05D007767 2.6e-124 449.5 411 63.0
ECA233G2464 Erigeron canadensis HOM05D006391 ORTHO05D007767 1.3e-123 447.2 400 63.2
TAR636G3322 Trochodendron aralioides HOM05D001448 ORTHO05D005781 3.7e-123 445.7 400 62.8
GSVIVG01036208001 Vitis vinifera HOM05D006391 ORTHO05D007767 1.4e-122 443.7 364 65.7
HanXRQChr08g0225371 Helianthus annuus HOM05D006391 ORTHO05D007767 4.1e-122 442.2 399 62.2
Lsat_1_v5_gn_8_2721 Lactuca sativa HOM05D006391 ORTHO05D007767 5.4e-122 441.8 405 62.5
Sopen11g002020 Solanum pennellii HOM05D006391 ORTHO05D007767 7.1e-122 441.4 400 61.5
FAN09G3726 Fragaria x ananassa HOM05D006391 ORTHO05D007767 1.6e-121 440.3 423 60.8
FAN02G0817 Fragaria x ananassa HOM05D006391 ORTHO05D007767 3.5e-121 439.1 422 60.7
PGSC0003DMG400028690 Solanum tuberosum HOM05D006391 ORTHO05D007767 3.5e-121 439.1 401 61.8
Nitab4.5_0004928g0020 Nicotiana tabacum HOM05D006391 ORTHO05D007767 7.8e-121 438.0 402 61.2
AUR62004876 Chenopodium quinoa HOM05D006391 ORTHO05D007767 1.0e-120 437.6 415 59.8
Dinv14621 Davidia involucrata HOM05D006391 ORTHO05D007767 3.0e-120 436.0 403 62.8
Psat6g143040 Pisum sativum HOM05D006391 ORTHO05D007767 6.6e-120 434.9 311 78.5
FAN05G1344 Fragaria x ananassa HOM05D006391 ORTHO05D007767 1.1e-119 434.1 423 59.6
FAN05G3173 Fragaria x ananassa HOM05D006391 ORTHO05D007767 1.1e-119 434.1 423 59.6
SalBow3G3308 Salvia bowleyana HOM05D006391 ORTHO05D007767 1.5e-119 433.7 404 61.9
AUR62037609 Chenopodium quinoa HOM05D006391 ORTHO05D007767 2.5e-119 433.0 415 60.0
Haze_04461 Corylus avellana HOM05D006391 ORTHO05D007767 2.1e-118 429.9 522 51.5
Cc02_g09040 Coffea canephora HOM05D006391 ORTHO05D007767 6.2e-118 428.3 411 59.9
MELO3C024661.2 Cucumis melo HOM05D006391 ORTHO05D007767 8.1e-118 427.9 437 59.3
ClCG06G009350 Citrullus lanatus HOM05D006391 ORTHO05D007767 4.0e-117 425.6 337 69.4
Nitab4.5_0000856g0160 Nicotiana tabacum HOM05D006391 ORTHO05D007767 4.0e-117 425.6 399 60.7
MBI17_g17506_MAGBIO Magnolia biondii HOM05D006391 ORTHO05D007767 5.2e-117 425.2 400 60.5
Solyc11g006080.2 Solanum lycopersicum HOM05D006391 ORTHO05D007767 6.8e-117 424.9 402 60.4
Peaxi162Scf00120g00213 Petunia axillaris HOM05D006391 ORTHO05D007767 2.0e-116 423.3 403 59.8
Sed0026137 Sechium edule HOM05D006391 ORTHO05D007767 7.6e-116 421.4 401 61.6
EL10Ac4g09055 Beta vulgaris HOM05D006391 ORTHO05D007767 9.9e-116 421.0 402 59.7
AT3G04560 Arabidopsis thaliana HOM05D006391 ORTHO05D007767 2.9e-115 419.5 423 59.8
AUR62001083 Chenopodium quinoa HOM05D006391 ORTHO05D007767 1.1e-114 417.5 439 56.5
Sed0020342 Sechium edule HOM05D006391 ORTHO05D007767 1.1e-114 417.5 404 59.9
CSS0020771 Camellia sinensis var. sinensis HOM05D006391 ORTHO05D007767 1.4e-114 417.2 393 61.3
AL3G14580 Arabidopsis lyrata HOM05D006391 ORTHO05D007767 5.4e-114 415.2 422 60.0
Migut.F00812 Erythranthe guttata HOM05D006391 ORTHO05D007767 7.1e-114 414.8 392 59.7
Hund22148 Selenicereus undatus HOM05D006391 ORTHO05D007767 7.1e-114 414.8 349 65.6
vmacro20003 Vaccinium macrocarpon HOM05D006391 ORTHO05D007767 9.3e-114 414.5 434 56.2
BolC5t34924H Brassica oleracea HOM05D006391 ORTHO05D007767 2.1e-113 413.3 422 58.1
THA.LOC104827288 Tarenaya hassleriana HOM05D006391 ORTHO05D007767 3.5e-113 412.5 425 57.2
BraA05t23038Z Brassica rapa HOM05D006391 ORTHO05D007767 6.0e-113 411.8 422 58.3
FvH4_6g02310 Fragaria vesca HOM05D006391 ORTHO05D007767 6.0e-113 411.8 427 57.1
FAN14G3605 Fragaria x ananassa HOM05D006391 ORTHO05D007767 6.0e-113 411.8 427 57.1
FAN14G5548 Fragaria x ananassa HOM05D006391 ORTHO05D007767 7.8e-113 411.4 427 56.9
Aa31LG5G14980 Aethionema arabicum HOM05D006391 ORTHO05D007767 1.7e-112 410.2 430 59.3
CAN.G582.18 Capsicum annuum HOM05D006391 ORTHO05D007767 1.7e-112 410.2 376 62.0
Carub.0003s0371 Capsella rubella HOM05D006391 ORTHO05D007767 2.3e-112 409.8 427 57.8
Thhalv10020805m.g Eutrema salsugineum HOM05D006391 ORTHO05D007767 3.0e-112 409.5 425 58.4
DCAR_028379 Daucus carota HOM05D006391 ORTHO05D007767 3.9e-112 409.1 333 65.2
ATR0680G180 Amborella trichopoda HOM05D006391 ORTHO05D007767 1.5e-111 407.1 396 59.8
PSO832G3851 Papaver somniferum HOM05D006391 ORTHO05D007767 1.6e-110 403.7 402 57.5
Aqoxy5G00275 Aquilegia oxysepala HOM05D006391 ORTHO05D007767 2.1e-110 403.3 403 57.3
BcaC05g30188 Brassica carinata HOM05D006391 ORTHO05D007767 3.6e-110 402.5 418 56.9
Sed0023982 Sechium edule HOM05D006391 ORTHO05D007767 6.2e-110 401.7 402 60.2
unitig_32.g11831 Utricularia gibba HOM05D006391 ORTHO05D007767 5.3e-109 398.7 419 55.1
CARHR078730 Cardamine hirsuta HOM05D006391 ORTHO05D007767 9.0e-109 397.9 428 57.7
PSO210G7203 Papaver somniferum HOM05D006391 ORTHO05D007767 7.6e-108 394.8 400 57.5
Rhsim05G0175400 Rhododendron simsii HOM05D006391 ORTHO05D007767 7.6e-108 394.8 414 55.8
Sp3g03400 Schrenkiella parvula HOM05D006391 ORTHO05D007767 9.9e-108 394.4 428 55.4
BcaC05g29933 Brassica carinata HOM05D006391 ORTHO05D007767 5.6e-103 378.6 420 54.8
C05p62710 Brassica napus HOM05D006391 ORTHO05D007767 7.3e-103 378.3 420 54.8
Ah.04g163310 Amaranthus hybridus HOM05D006391 ORTHO05D007767 2.4e-101 373.2 407 56.8
A05p42930 Brassica napus HOM05D006391 ORTHO05D007767 1.2e-100 370.9 420 54.0
Os02g0820600 Oryza sativa ssp. japonica HOM05D006391 ORTHO05D007767 5.8e-100 368.6 415 53.5
Zm00001eb259140 Zea mays HOM05D006391 ORTHO05D007767 8.7e-96 354.8 327 61.8
SGA_v2.0_scaffold243G44310 Striga asiatica HOM05D006391 ORTHO05D007767 2.6e-92 343.2 352 55.7
SEGI_17356 Sequoiadendron giganteum HOM05D006391 ORTHO05D007767 7.4e-87 325.1 340 54.1
MD04G1228400 Malus domestica HOM05D006391 ORTHO05D007767 1.6e-86 323.9 272 64.0
CDE04G1237 Ceratophyllum demersum HOM05D006391 ORTHO05D007767 6.9e-85 318.5 310 59.4
Cpa.g.sc162.14 Carica papaya HOM05D006391 ORTHO05D007767 2.5e-82 310.1 320 59.4
HPP92_007146 Vanilla planifolia HOM05D006391 ORTHO05D007767 1.2e-73 281.2 263 57.8
Pp3c19_8680 Physcomitrium patens HOM05D006391 ORTHO05D007767 1.8e-72 277.3 400 44.8
SMO203G0061 Selaginella moellendorffii HOM05D006391 ORTHO05D007767 1.4e-69 267.7 328 47.3
Mapoly0044s0074 Marchantia polymorpha HOM05D006391 ORTHO05D007767 6.5e-67 258.8 408 41.9
Oeu034581.1 Olea europaea HOM05D006391 ORTHO05D007767 3.9e-64 249.6 208 61.5
HPP92_007142 Vanilla planifolia HOM05D006391 ORTHO05D007767 7.7e-60 235.3 296 49.7
CBR_g8309 Chara braunii HOM05D006391 ORTHO05D007767 4.4e-55 219.5 391 38.9
QL03p032009 Quercus lobata HOM05D006391 ORTHO05D007767 5.0e-43 179.5 126 74.6
SHI23187 Sapria himalayana HOM05D006391 ORTHO05D007767 6.8e-40 169.1 197 53.8
Oeu058337.1 Olea europaea HOM05D006391 ORTHO05D007767 2.6e-39 167.2 138 64.5
HPP92_007141 Vanilla planifolia HOM05D006391 ORTHO05D007767 2.8e-33 147.1 88 78.4
MCO07G609 Micromonas commoda HOM05D006391 ORTHO05D007767 6.2e-25 119.4 349 28.1
BcaB04g19320 Brassica carinata HOM05D006391 ORTHO05D007767 4.3e-18 96.7 86 59.3
MD04G1228300 Malus domestica HOM05D006391 ORTHO05D007767 6.2e-17 92.8 141 48.2
Cre02.g105450 Chlamydomonas reinhardtii HOM05D006391 ORTHO05D007767 1.6e-12 78.2 216 32.4
BcaC02g11594 Brassica carinata HOM05D006391 ORTHO05D007767 7.3e-10 69.3 66 56.1
PRCOL_00004538 Prasinoderma coloniale HOM05D006391 ORTHO05D007767 2.8e-09 67.4 322 24.8
BolC5t34511H Brassica oleracea HOM05D004842 ORTHO05D005929 3.6e-09 67.0 46 71.7
BolC3t17856H Brassica oleracea HOM05D004842 ORTHO05D005929 6.2e-09 66.2 46 69.6
BolC3t13192H Brassica oleracea HOM05D006391 ORTHO05D007767 6.8e-08 62.8 164 32.9
SHI23188 Sapria himalayana HOM05D006391 ORTHO05D007767 2.6e-07 60.8 119 36.1


User provided reference genes

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