Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G10259 Trifolium pratense HOM05D006565 ORTHO05D008717 7.6e-200 700.3 349 100.0
Ca_10426_v3 Cicer arietinum L. HOM05D006565 ORTHO05D008717 3.4e-168 595.1 346 85.8
Glyma.20G195000 Glycine max HOM05D006565 ORTHO05D008717 1.1e-158 563.5 346 81.2
Psat6g171600 Pisum sativum HOM05D006565 ORTHO05D008717 9.4e-158 560.5 347 82.7
Lj5g0019410 Lotus japonicus HOM05D006565 ORTHO05D008717 5.1e-156 554.7 352 81.0
Medtr1g090380 Medicago truncatula HOM05D006565 ORTHO05D008717 1.4e-153 546.6 300 89.7
arahy.Tifrunner.gnm1.ann1.V0HLME Arachis hypogaea HOM05D006565 ORTHO05D008717 2.2e-151 539.3 347 79.3
arahy.Tifrunner.gnm1.ann1.51BCJ8 Arachis hypogaea HOM05D006565 ORTHO05D008717 1.1e-150 537.0 348 78.2
Lalb_Chr06g0169851 Lupinus albus HOM05D006565 ORTHO05D008717 9.4e-150 533.9 350 76.6
VMungo0720G0186 Vigna mungo HOM05D006565 ORTHO05D008717 3.7e-138 495.4 322 77.6
Phvul.007G137100 Phaseolus vulgaris HOM05D006565 ORTHO05D008717 3.8e-135 485.3 343 72.9
Ciclev10015763m.g Citrus clementina HOM05D006565 ORTHO05D008717 4.2e-134 481.9 308 75.6
Atru.chr12.1084 Acer truncatum HOM05D006565 ORTHO05D008717 6.1e-133 478.0 347 70.0
Potri.010G243900 Populus trichocarpa HOM05D006565 ORTHO05D008717 1.4e-132 476.9 332 72.0
Thecc.10G119100 Theobroma cacao HOM05D006565 ORTHO05D008717 2.0e-131 473.0 313 72.2
Actinidia34736 Actinidia chinensis HOM05D006565 ORTHO05D008717 5.7e-131 471.5 323 72.1
CiPaw.14G036000 Carya illinoinensis HOM05D006565 ORTHO05D008717 2.8e-130 469.2 347 70.9
TAR636G0179 Trochodendron aralioides HOM05D006565 ORTHO05D008717 9.1e-129 464.2 356 68.0
GSVIVG01034599001 Vitis vinifera HOM05D006565 ORTHO05D008717 1.2e-128 463.8 294 75.5
QL04p048612 Quercus lobata HOM05D006565 ORTHO05D008717 2.0e-128 463.0 345 69.3
Duzib114G0050 Durio zibethinus HOM05D006565 ORTHO05D008717 3.5e-128 462.2 301 74.4
RcHm_v2.0_Chr1g0332191 Rosa chinensis HOM05D006565 ORTHO05D008717 2.2e-127 459.5 329 69.9
Rhsim09G0140500 Rhododendron simsii HOM05D006565 ORTHO05D008717 3.8e-127 458.8 346 68.2
Prupe.2G073700 Prunus persica HOM05D006565 ORTHO05D008717 1.9e-126 456.4 316 71.2
Manes.10G059200 Manihot esculenta HOM05D006565 ORTHO05D008717 2.5e-126 456.1 293 74.7
vmacro10331 Vaccinium macrocarpon HOM05D006565 ORTHO05D008717 4.2e-126 455.3 317 73.2
MD07G1062700 Malus domestica HOM05D006565 ORTHO05D008717 7.2e-126 454.5 316 71.8
FvH4_7g05460 Fragaria vesca HOM05D006565 ORTHO05D008717 2.1e-125 453.0 309 71.2
Gohir.D05G287300 Gossypium hirsutum HOM05D006565 ORTHO05D008717 2.8e-125 452.6 349 65.6
Gorai.009G302300 Gossypium raimondii HOM05D006565 ORTHO05D008717 6.1e-125 451.4 349 65.6
Gohir.A05G286300 Gossypium hirsutum HOM05D006565 ORTHO05D008717 8.0e-125 451.1 349 65.3
TWI15G0448 Tripterygium wilfordii HOM05D006565 ORTHO05D008717 1.8e-124 449.9 291 73.5
Aqoxy1G00616 Aquilegia oxysepala HOM05D006565 ORTHO05D008717 2.3e-124 449.5 288 74.7
Nn2g14368 Nelumbo nucifera HOM05D006565 ORTHO05D008717 3.0e-124 449.1 350 67.1
Sc07g0003130 Simmondsia chinensis HOM05D006565 ORTHO05D008717 4.0e-124 448.7 286 75.9
ClCG05G021990 Citrullus lanatus HOM05D006565 ORTHO05D008717 8.8e-124 447.6 344 66.6
Sabra10G0190700 Salix brachista HOM05D006565 ORTHO05D008717 8.8e-124 447.6 335 66.9
Cc02_g09290 Coffea canephora HOM05D006565 ORTHO05D008717 3.4e-123 445.7 300 70.3
CANSAT56G1291 Cannabis sativa HOM05D006565 ORTHO05D008717 4.4e-123 445.3 318 72.0
Eucgr.G02667 Eucalyptus grandis HOM05D006565 ORTHO05D008717 4.4e-123 445.3 289 73.7
HanXRQChr08g0217341 Helianthus annuus HOM05D006565 ORTHO05D008717 1.1e-121 440.7 292 74.0
SGA_v2.0_scaffold90G27708 Striga asiatica HOM05D006565 ORTHO05D008717 3.1e-121 439.1 306 71.2
Migut.F00832 Erythranthe guttata HOM05D006565 ORTHO05D008717 4.1e-121 438.7 300 71.7
MELO3C012330.2 Cucumis melo HOM05D006565 ORTHO05D008717 5.4e-121 438.3 347 65.1
CsaV3_5G035170 Cucumis sativus L. HOM05D006565 ORTHO05D008717 7.0e-121 438.0 338 66.6
Carub.0004s2066 Capsella rubella HOM05D006565 ORTHO05D008717 9.2e-121 437.6 318 68.9
COL.COLO4_10008 Corchorus olitorius HOM05D006565 ORTHO05D008717 2.7e-120 436.0 302 72.2
Lj3A921T38 Lonicera japonica HOM05D006565 ORTHO05D008717 2.7e-120 436.0 275 77.1
HanXRQChr02g0049321 Helianthus annuus HOM05D006565 ORTHO05D008717 4.5e-120 435.3 290 73.4
Os03g0648900 Oryza sativa ssp. japonica HOM05D006565 ORTHO05D008717 2.3e-119 433.0 288 71.9
ECA233G2794 Erigeron canadensis HOM05D006565 ORTHO05D008717 6.6e-119 431.4 293 72.0
RhsimUnG0215000 Rhododendron simsii HOM05D006565 ORTHO05D008717 1.5e-118 430.3 405 58.3
PSO339G2240 Papaver somniferum HOM05D006565 ORTHO05D008717 2.5e-118 429.5 290 71.0
Dinv03812 Davidia involucrata HOM05D006565 ORTHO05D008717 4.3e-118 428.7 293 71.0
MSTRG.9025 Avicennia marina HOM05D006565 ORTHO05D008717 5.6e-118 428.3 312 67.0
CARHR133350 Cardamine hirsuta HOM05D006565 ORTHO05D008717 2.1e-117 426.4 294 71.1
A03p21520 Brassica napus HOM05D006565 ORTHO05D008717 4.7e-117 425.2 336 64.6
Sp4g21020 Schrenkiella parvula HOM05D006565 ORTHO05D008717 1.0e-116 424.1 298 70.8
Solyc11g006420.2 Solanum lycopersicum HOM05D006565 ORTHO05D008717 2.3e-116 422.9 335 62.7
CAN.G143.52 Capsicum annuum HOM05D006565 ORTHO05D008717 4.0e-116 422.2 285 70.5
AT2G38680 Arabidopsis thaliana HOM05D006565 ORTHO05D008717 5.2e-116 421.8 304 69.1
Sed0004638 Sechium edule HOM05D006565 ORTHO05D008717 1.2e-115 420.6 346 63.0
Zm00001eb218510 Zea mays HOM05D006565 ORTHO05D008717 1.5e-115 420.2 288 69.8
THA.LOC104801973 Tarenaya hassleriana HOM05D006565 ORTHO05D008717 2.6e-115 419.5 320 66.6
AUR62034160 Chenopodium quinoa HOM05D006565 ORTHO05D008717 3.4e-115 419.1 314 65.0
Thhalv10016992m.g Eutrema salsugineum HOM05D006565 ORTHO05D008717 5.7e-115 418.3 292 70.9
Sopen11g002320 Solanum pennellii HOM05D006565 ORTHO05D008717 1.3e-114 417.2 290 69.0
PGSC0003DMG400014108 Solanum tuberosum HOM05D006565 ORTHO05D008717 2.2e-114 416.4 290 67.9
Peaxi162Scf00120g01317 Petunia axillaris HOM05D006565 ORTHO05D008717 3.7e-114 415.6 325 63.4
HPP92_013938 Vanilla planifolia HOM05D006565 ORTHO05D008717 3.7e-114 415.6 288 69.4
Dinv06042 Davidia involucrata HOM05D006565 ORTHO05D008717 8.3e-114 414.5 275 73.5
ATR0697G221 Amborella trichopoda HOM05D006565 ORTHO05D008717 1.8e-113 413.3 270 73.0
AUR62014278 Chenopodium quinoa HOM05D006565 ORTHO05D008717 1.8e-113 413.3 314 65.0
EL10Ac4g08734 Beta vulgaris HOM05D006565 ORTHO05D008717 7.0e-113 411.4 285 70.9
Lsat_1_v5_gn_8_21800 Lactuca sativa HOM05D006565 ORTHO05D008717 2.7e-112 409.5 337 62.0
BolC3t14938H Brassica oleracea HOM05D006565 ORTHO05D008717 7.8e-112 407.9 318 64.5
C03p25510 Brassica napus HOM05D006565 ORTHO05D008717 3.0e-111 406.0 312 65.7
BraA03t11388Z Brassica rapa HOM05D006565 ORTHO05D008717 3.9e-111 405.6 335 63.3
Hund06810 Selenicereus undatus HOM05D006565 ORTHO05D008717 1.9e-105 386.7 340 60.0
Nitab4.5_0001781g0210 Nicotiana tabacum HOM05D006565 ORTHO05D008717 1.2e-104 384.0 283 67.1
CDE06G1733 Ceratophyllum demersum HOM05D006565 ORTHO05D008717 1.7e-103 380.2 269 69.9
SEGI_36612 Sequoiadendron giganteum HOM05D006565 ORTHO05D008717 3.3e-102 375.9 268 67.2
FAN06G1903 Fragaria x ananassa HOM05D006565 ORTHO05D008717 2.3e-100 369.8 292 66.1
Oeu009252.1 Olea europaea HOM05D006565 ORTHO05D008717 3.1e-100 369.4 306 62.1
SMO367G1082 Selaginella moellendorffii HOM05D006565 ORTHO05D008717 5.2e-100 368.6 287 62.4
AagrBONN_evm.TU.Sc2ySwM_228.2835 Anthoceros agrestis HOM05D006565 ORTHO05D008717 2.9e-98 362.8 317 58.4
FAN01G3085 Fragaria x ananassa HOM05D006565 ORTHO05D008717 1.4e-97 360.5 300 63.0
FAN10G4168 Fragaria x ananassa HOM05D006565 ORTHO05D008717 1.3e-95 354.0 317 60.9
Pp3c1_24570 Physcomitrium patens HOM05D006565 ORTHO05D008717 2.3e-95 353.2 310 56.5
FAN21G0259 Fragaria x ananassa HOM05D006565 ORTHO05D008717 5.6e-94 348.6 275 64.7
Prupe.2G074100 Prunus persica HOM05D006565 ORTHO05D008717 2.8e-93 346.3 219 76.7
AL4G35960 Arabidopsis lyrata HOM05D006565 ORTHO05D008717 1.3e-90 337.4 311 58.2
Mapoly0082s0075 Marchantia polymorpha HOM05D006565 ORTHO05D008717 2.4e-89 333.2 267 60.3
PGSC0003DMG400001988 Solanum tuberosum HOM05D006565 ORTHO05D008717 6.0e-80 302.0 206 69.4
FvH4_1g27810 Fragaria vesca HOM05D006565 ORTHO05D008717 1.9e-78 297.0 270 60.4
CBR_g36829 Chara braunii HOM05D006565 ORTHO05D001468 2.1e-77 293.5 387 43.2
Nitab4.5_0016854g0010 Nicotiana tabacum HOM05D006565 ORTHO05D008717 4.0e-76 289.3 213 67.6
Haze_03436 Corylus avellana HOM05D006565 ORTHO05D008717 4.6e-64 249.2 312 48.7
MBI05_g36782_MAGBIO Magnolia biondii HOM05D006565 ORTHO05D008717 7.4e-62 241.9 160 71.9
Sabra13G0091500 Salix brachista HOM05D006565 ORTHO05D008717 4.9e-58 229.2 154 72.7
Lj3A922G54 Lonicera japonica HOM05D006565 ORTHO05D008717 1.1e-57 228.0 142 76.1
Potri.008G015201 Populus trichocarpa HOM05D006565 ORTHO05D008717 2.1e-56 223.8 140 78.6
PSO384G3661 Papaver somniferum HOM05D006565 ORTHO05D008717 1.4e-49 201.1 130 73.1
FAN10G3234 Fragaria x ananassa HOM05D006565 ORTHO05D008717 3.6e-48 196.4 270 45.6
Glyma.10G195001 Glycine max HOM05D006565 ORTHO05D008717 1.5e-46 191.0 107 81.3
FAN10G0629 Fragaria x ananassa HOM05D006565 ORTHO05D008717 1.2e-40 171.4 203 51.7
FAN03G2487 Fragaria x ananassa HOM05D006565 ORTHO05D008717 1.6e-40 171.0 203 51.2
Hma1.2p1_0098F.1_g048200 Hydrangea macrophylla HOM05D006565 ORTHO05D008717 1.0e-39 168.3 108 71.3
TPR.G13189 Trifolium pratense HOM05D006565 ORTHO05D025622 4.8e-37 159.5 81 100.0
Lj3A922G55 Lonicera japonica HOM05D006565 ORTHO05D008717 1.4e-33 147.9 94 74.5
Cpa.g.sc33.129 Carica papaya HOM05D006565 ORTHO05D008717 3.2e-33 146.7 93 73.1
Cpa.g.sc33.128 Carica papaya HOM05D006565 ORTHO05D008717 2.2e-29 134.0 82 74.4
CSS0040424 Camellia sinensis var. sinensis HOM05D006565 ORTHO05D008717 1.0e-23 115.2 66 75.8
Aqoxy6G01578 Aquilegia oxysepala HOM05D006565 ORTHO05D008717 1.5e-22 111.3 144 45.8
CSS0049814 Camellia sinensis var. sinensis HOM05D006565 ORTHO05D008717 1.2e-16 91.7 60 71.7
RhsimUnG0214900 Rhododendron simsii HOM05D006565 ORTHO05D008717 1.4e-15 88.2 82 56.1
MBI08_g05402_MAGBIO Magnolia biondii HOM05D001309 ORTHO05D000385 3.0e-15 87.0 95 49.5
Glyma.10G195100 Glycine max HOM05D006565 ORTHO05D025622 8.8e-15 85.5 82 62.2
MBI15_g31580_MAGBIO Magnolia biondii HOM05D001433 ORTHO05D011977 4.4e-14 83.2 60 65.0
Aqoxy6G01581 Aquilegia oxysepala HOM05D006565 ORTHO05D000596 5.9e-11 72.8 41 80.5
Psat7g239080 Pisum sativum HOM05D005767 ORTHO05D006785 3.8e-10 70.1 81 48.1
MBI17_g02193_MAGBIO Magnolia biondii HOM05D006565 ORTHO05D011977 1.5e-09 68.2 44 72.7
MBI05_g33289_MAGBIO Magnolia biondii HOM05D006565 ORTHO05D008717 5.5e-09 66.2 42 76.2
COL.COLO4_26864 Corchorus olitorius HOM05D002341 ORTHO05D003165 3.4e-06 57.0 39 66.7
MBI06_g14037_MAGBIO Magnolia biondii HOM05D001433 ORTHO05D011977 4.4e-06 56.6 42 61.9


User provided reference genes

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