Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G1024 Trifolium pratense HOM05D008113 ORTHO05D009793 4.1e-69 265.0 175 100.0
Medtr5g030480 Medicago truncatula HOM05D008113 ORTHO05D009793 3.2e-50 202.2 175 64.6
Psat2g135920 Pisum sativum HOM05D008113 ORTHO05D009793 3.4e-47 192.2 175 60.6
Ca_06079_v3 Cicer arietinum L. HOM05D008113 ORTHO05D009793 3.7e-46 188.7 175 62.3
Glyma.09G204200 Glycine max HOM05D008113 ORTHO05D009793 5.0e-35 151.8 175 51.4
Lj2g0011936 Lotus japonicus HOM05D008113 ORTHO05D009793 1.4e-32 143.7 174 51.1
Glyma.01G018600 Glycine max HOM05D008113 ORTHO05D009793 4.0e-32 142.1 176 55.1
Phvul.002G141700 Phaseolus vulgaris HOM05D008113 ORTHO05D009793 5.2e-32 141.7 175 49.1
VMungo1215G1592 Vigna mungo HOM05D008113 ORTHO05D009793 4.9e-30 135.2 175 47.4
Lalb_Chr16g0381371 Lupinus albus HOM05D008113 ORTHO05D009793 2.3e-24 116.3 175 54.3
Cfa012440 Carpinus fangiana HOM05D008113 ORTHO05D009793 3.6e-17 92.4 175 40.0
Atru.chr6.1709 Acer truncatum HOM05D008113 ORTHO05D009793 1.4e-16 90.5 168 41.7
QL12p005179 Quercus lobata HOM05D008113 ORTHO05D009793 1.5e-15 87.0 176 36.9
Manes.17G015710 Manihot esculenta HOM05D008113 ORTHO05D009793 1.1e-13 80.9 178 36.0
CiPaw.11G093400 Carya illinoinensis HOM05D008113 ORTHO05D009793 1.2e-12 77.4 177 35.6
Thecc.03G227800 Theobroma cacao HOM05D008113 ORTHO05D009793 1.2e-12 77.4 99 46.5
Prupe.5G036500 Prunus persica HOM05D008113 ORTHO05D009793 2.1e-12 76.6 172 36.6
DCAR_008271 Daucus carota HOM05D008113 ORTHO05D009793 3.5e-12 75.9 167 35.3
Duzib205G0546 Durio zibethinus HOM05D008113 ORTHO05D009793 3.5e-12 75.9 154 36.4
CSS0012952 Camellia sinensis var. sinensis HOM05D008113 ORTHO05D009793 7.8e-12 74.7 177 32.8
CSS0027769 Camellia sinensis var. sinensis HOM05D008113 ORTHO05D009793 7.8e-12 74.7 177 32.8
FAN08G1006 Fragaria x ananassa HOM05D008113 ORTHO05D009793 1.7e-11 73.6 177 35.0
RcHm_v2.0_Chr7g0209731 Rosa chinensis HOM05D008113 ORTHO05D009793 1.7e-11 73.6 168 35.1
FAN04G2725 Fragaria x ananassa HOM05D008113 ORTHO05D009793 1.9e-10 70.1 177 34.5
COL.COLO4_17032 Corchorus olitorius HOM05D008113 ORTHO05D009793 2.5e-10 69.7 98 46.9
Sabra01G0111000 Salix brachista HOM05D008113 ORTHO05D009793 4.3e-10 68.9 99 41.4
PGSC0003DMG400001153 Solanum tuberosum HOM05D023668 ORTHO05D009793 1.6e-09 67.0 92 39.1
Haze_08228 Corylus avellana HOM05D008113 ORTHO05D009793 2.1e-09 66.6 143 37.8
Dinv28958 Davidia involucrata HOM05D008113 ORTHO05D009793 6.2e-09 65.1 178 33.1
FvH4_5g22080 Fragaria vesca HOM05D008113 ORTHO05D009793 8.1e-09 64.7 162 34.0
MSTRG.1985 Avicennia marina HOM05D008113 ORTHO05D009793 1.8e-08 63.5 93 39.8
TWI60G1148 Tripterygium wilfordii HOM05D008113 ORTHO05D009793 2.4e-08 63.2 158 31.0
Gohir.D03G171300 Gossypium hirsutum HOM05D008113 ORTHO05D009793 4.0e-08 62.4 152 36.2
Gorai.003G181900 Gossypium raimondii HOM05D008113 ORTHO05D009793 5.2e-08 62.0 152 36.2
Ciclev10012946m.g Citrus clementina HOM05D008113 ORTHO05D009793 6.8e-08 61.6 179 32.4
Sopen08g001050 Solanum pennellii HOM05D023668 ORTHO05D009793 6.8e-08 61.6 92 37.0
Gohir.A03G000900 Gossypium hirsutum HOM05D008113 ORTHO05D009793 1.2e-07 60.8 152 35.5
Potri.001G142300 Populus trichocarpa HOM05D008113 ORTHO05D009793 1.2e-07 60.8 101 38.6
CSS0025106 Camellia sinensis var. sinensis HOM05D008113 ORTHO05D009793 1.5e-07 60.5 165 29.1
Sed0025759 Sechium edule HOM05D008113 ORTHO05D009793 1.5e-07 60.5 168 29.2
Sed0024146 Sechium edule HOM05D008113 ORTHO05D009793 2.6e-07 59.7 173 27.7
CsaV3_3G049170 Cucumis sativus L. HOM05D008113 ORTHO05D009793 4.4e-07 58.9 99 36.4
MD06G1034200 Malus domestica HOM05D008113 ORTHO05D009793 4.4e-07 58.9 95 41.1
Nitab4.5_0002539g0010 Nicotiana tabacum HOM05D023668 ORTHO05D009793 5.8e-07 58.5 94 38.3
MELO3C003410.2 Cucumis melo HOM05D008113 ORTHO05D009793 2.2e-06 56.6 99 35.4
Hma1.2p1_1063F.1_g253560 Hydrangea macrophylla HOM05D008113 ORTHO05D009793 2.2e-06 56.6 177 33.3
THA.LOC104814445 Tarenaya hassleriana HOM05D008113 ORTHO05D009793 2.2e-06 56.6 93 37.6
Hma1.2p1_2704F.1_g327140 Hydrangea macrophylla HOM05D008113 ORTHO05D009793 4.9e-06 55.5 178 34.3
Cc08_g02770 Coffea canephora HOM05D008113 ORTHO05D009793 8.4e-06 54.7 92 37.0
MD06G1034100 Malus domestica HOM05D008113 ORTHO05D009793 8.4e-06 54.7 95 38.9


User provided reference genes

Program Settings