Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G10190 Trifolium pratense HOM05D001739 ORTHO05D004575 3.0e-117 425.2 226 100.0
TPR.G10174 Trifolium pratense HOM05D001739 ORTHO05D004575 2.4e-77 292.7 204 77.0
Ca_09790_v3 Cicer arietinum L. HOM05D001739 ORTHO05D004575 1.3e-46 190.7 197 53.3
Lj4g0016027 Lotus japonicus HOM05D001739 ORTHO05D004575 7.2e-42 174.9 198 50.5
Medtr1g072970 Medicago truncatula HOM05D001739 ORTHO05D004575 4.6e-41 172.2 197 51.8
Psat6g134600 Pisum sativum HOM05D001739 ORTHO05D004575 7.9e-41 171.4 197 51.3
Medtr1g072890 Medicago truncatula HOM05D001739 ORTHO05D004575 2.5e-39 166.4 200 52.5
TPR.G18558 Trifolium pratense HOM05D001739 ORTHO05D004575 2.8e-38 162.9 190 50.0
Lalb_Chr12g0200311 Lupinus albus HOM05D001739 ORTHO05D004575 3.7e-38 162.5 198 48.0
Lalb_Chr13g0299281 Lupinus albus HOM05D001739 ORTHO05D004575 5.3e-37 158.7 198 46.5
Psat7g002920 Pisum sativum HOM05D001739 ORTHO05D004575 2.6e-36 156.4 188 47.9
Glyma.17G046900 Glycine max HOM05D001739 ORTHO05D004575 1.0e-35 154.5 202 46.5
Glyma.13G112900 Glycine max HOM05D001739 ORTHO05D004575 1.7e-35 153.7 200 45.0
Phvul.003G128600 Phaseolus vulgaris HOM05D001739 ORTHO05D004575 2.2e-35 153.3 200 45.0
VMungo1215G0229 Vigna mungo HOM05D001739 ORTHO05D004575 2.5e-34 149.8 200 44.5
arahy.Tifrunner.gnm1.ann1.7457H2 Arachis hypogaea HOM05D001739 ORTHO05D004575 5.5e-34 148.7 188 47.9
arahy.Tifrunner.gnm1.ann1.SDZ4E8 Arachis hypogaea HOM05D001739 ORTHO05D004575 2.1e-33 146.7 189 46.6
arahy.Tifrunner.gnm1.ann1.9HZQ4R Arachis hypogaea HOM05D001739 ORTHO05D004575 6.1e-33 145.2 188 46.3
arahy.Tifrunner.gnm1.ann1.WW7XLJ Arachis hypogaea HOM05D001739 ORTHO05D004575 1.0e-32 144.4 188 46.8
TAR383G0739 Trochodendron aralioides HOM05D001739 ORTHO05D004575 6.7e-32 141.7 190 38.4
Lj7C690T11 Lonicera japonica HOM05D001739 ORTHO05D004575 1.7e-30 137.1 200 39.0
ClCG03G014800 Citrullus lanatus HOM05D001739 ORTHO05D004575 6.3e-30 135.2 191 39.8
CsaV3_1G041350 Cucumis sativus L. HOM05D001739 ORTHO05D004575 1.1e-29 134.4 190 40.5
MELO3C015548.2 Cucumis melo HOM05D001739 ORTHO05D004575 1.8e-29 133.7 192 40.1
Cfa002954 Carpinus fangiana HOM05D001739 ORTHO05D004575 3.1e-29 132.9 189 39.7
Nn8g40294 Nelumbo nucifera HOM05D001739 ORTHO05D004575 3.1e-29 132.9 198 38.4
Rhsim05G0003800 Rhododendron simsii HOM05D001739 ORTHO05D004575 4.1e-29 132.5 197 39.1
Prupe.6G204500 Prunus persica HOM05D001739 ORTHO05D004575 9.1e-29 131.3 188 42.6
Dinv25520 Davidia involucrata HOM05D001739 ORTHO05D004575 1.2e-28 131.0 187 40.1
Haze_26051 Corylus avellana HOM05D001739 ORTHO05D004575 1.6e-28 130.6 189 39.7
Lsat_1_v5_gn_7_35381 Lactuca sativa HOM05D001739 ORTHO05D004575 2.0e-28 130.2 192 38.5
MD15G1221900 Malus domestica HOM05D001739 ORTHO05D004575 2.0e-28 130.2 203 39.4
Prupe.7G193800 Prunus persica HOM05D001739 ORTHO05D004575 3.5e-28 129.4 189 41.3
QL11p002157 Quercus lobata HOM05D001739 ORTHO05D004575 1.7e-27 127.1 202 39.6
CiPaw.03G202600 Carya illinoinensis HOM05D001739 ORTHO05D004575 2.2e-27 126.7 192 38.5
Aqoxy7G03292 Aquilegia oxysepala HOM05D001739 ORTHO05D004575 2.9e-27 126.3 196 37.2
Sabra18G0055900 Salix brachista HOM05D001739 ORTHO05D004575 6.5e-27 125.2 192 36.5
vmacro17095 Vaccinium macrocarpon HOM05D001739 ORTHO05D004575 1.1e-26 124.4 189 34.9
vmacro23084 Vaccinium macrocarpon HOM05D001739 ORTHO05D004575 1.1e-26 124.4 189 34.9
Atru.chr7.1752 Acer truncatum HOM05D001739 ORTHO05D004575 4.2e-26 122.5 191 37.2
Hma1.2p1_0169F.1_g074380 Hydrangea macrophylla HOM05D001739 ORTHO05D004575 5.5e-26 122.1 186 37.6
Duzib168G0208 Durio zibethinus HOM05D001739 ORTHO05D004575 1.6e-25 120.6 186 36.6
Potri.006G137900 Populus trichocarpa HOM05D001739 ORTHO05D004575 2.1e-25 120.2 188 36.7
Thecc.09G071800 Theobroma cacao HOM05D001739 ORTHO05D004575 2.1e-25 120.2 186 37.1
COL.COLO4_21223 Corchorus olitorius HOM05D001739 ORTHO05D004575 2.7e-25 119.8 186 37.1
Sed0004150 Sechium edule HOM05D001739 ORTHO05D004575 3.6e-25 119.4 191 38.2
CANSAT56G3462 Cannabis sativa HOM05D001739 ORTHO05D004575 4.7e-25 119.0 186 39.2
Sed0021617 Sechium edule HOM05D001739 ORTHO05D004575 6.1e-25 118.6 186 37.1
vmacro17113 Vaccinium macrocarpon HOM05D001739 ORTHO05D004575 8.0e-25 118.2 189 33.3
Gohir.A07G016500 Gossypium hirsutum HOM05D001739 ORTHO05D004575 3.0e-24 116.3 186 34.9
Manes.16G091500 Manihot esculenta HOM05D001739 ORTHO05D004575 3.0e-24 116.3 199 36.2
Gohir.D07G016300 Gossypium hirsutum HOM05D001739 ORTHO05D004575 4.0e-24 115.9 186 34.9
Gorai.001G017100 Gossypium raimondii HOM05D001739 ORTHO05D004575 5.2e-24 115.5 186 34.4
HanXRQChr09g0273551 Helianthus annuus HOM05D001739 ORTHO05D004575 5.2e-24 115.5 192 36.5
TPR.G13945 Trifolium pratense HOM05D001739 ORTHO05D004575 8.8e-24 114.8 194 39.2
MD02G1099100 Malus domestica HOM05D001739 ORTHO05D004575 2.6e-23 113.2 167 39.5
Nitab4.5_0007773g0020 Nicotiana tabacum HOM05D001739 ORTHO05D004575 2.6e-23 113.2 195 35.4
DCAR_005064 Daucus carota HOM05D001739 ORTHO05D004575 4.4e-23 112.5 198 35.9
ECA240G3214 Erigeron canadensis HOM05D001739 ORTHO05D004575 4.4e-23 112.5 194 35.6
MSTRG.5982 Avicennia marina HOM05D001739 ORTHO05D004575 5.7e-23 112.1 196 35.7
Cpa.g.sc32.6 Carica papaya HOM05D001739 ORTHO05D004575 5.7e-23 112.1 194 33.5
HanXRQChr04g0122371 Helianthus annuus HOM05D001739 ORTHO05D004575 5.7e-23 112.1 199 34.7
SGA_v2.0_scaffold281G46906 Striga asiatica HOM05D001739 ORTHO05D004575 3.7e-22 109.4 193 35.2
TWI32G0648 Tripterygium wilfordii HOM05D001739 ORTHO05D004575 4.8e-22 109.0 188 32.4
Sc24g0001530 Simmondsia chinensis HOM05D001739 ORTHO05D004575 1.1e-21 107.8 190 32.1
CSS0017458 Camellia sinensis var. sinensis HOM05D001739 ORTHO05D004575 2.4e-21 106.7 169 37.3
Ciclev10023308m.g Citrus clementina HOM05D001739 ORTHO05D004575 2.4e-21 106.7 201 35.3
CAN.G63.12 Capsicum annuum HOM05D001739 ORTHO05D004575 3.1e-21 106.3 198 33.8
AUR62039592 Chenopodium quinoa HOM05D001739 ORTHO05D004575 7.0e-21 105.1 205 35.1
PGR142G3865 Punica granatum HOM05D001739 ORTHO05D004575 9.1e-21 104.8 186 33.9
Sopen07g021980 Solanum pennellii HOM05D001739 ORTHO05D004575 1.2e-20 104.4 209 34.9
RcHm_v2.0_Chr2g0095731 Rosa chinensis HOM05D001739 ORTHO05D004575 2.0e-20 103.6 192 33.3
AUR62019633 Chenopodium quinoa HOM05D001739 ORTHO05D004575 5.9e-20 102.1 195 34.4
FAN26G0091 Fragaria x ananassa HOM05D001739 ORTHO05D004575 7.7e-20 101.7 192 33.3
CDE12G0121 Ceratophyllum demersum HOM05D001739 ORTHO05D004575 1.0e-19 101.3 200 33.5
Cc06_g12580 Coffea canephora HOM05D001739 ORTHO05D004575 1.3e-19 100.9 194 34.0
FAN23G1590 Fragaria x ananassa HOM05D001739 ORTHO05D004575 2.2e-19 100.1 192 32.8
SHI02768 Sapria himalayana HOM05D001739 ORTHO05D004575 2.2e-19 100.1 190 32.6
FAN26G1120 Fragaria x ananassa HOM05D001739 ORTHO05D004575 3.8e-19 99.4 192 32.8
FvH4_1g09210 Fragaria vesca HOM05D001739 ORTHO05D004575 5.0e-19 99.0 192 32.8
PSO104G0064 Papaver somniferum HOM05D001739 ORTHO05D004575 5.0e-19 99.0 202 32.2
Ah.09g229240 Amaranthus hybridus HOM05D001739 ORTHO05D004575 8.5e-19 98.2 202 33.2
EL10Ac8g19018 Beta vulgaris HOM05D001739 ORTHO05D004575 8.5e-19 98.2 204 31.9
FAN19G0975 Fragaria x ananassa HOM05D001739 ORTHO05D004575 1.9e-18 97.1 192 31.8
Hund23253 Selenicereus undatus HOM05D001739 ORTHO05D004575 2.5e-18 96.7 199 31.7
PSO421G0331 Papaver somniferum HOM05D001739 ORTHO05D004575 3.2e-18 96.3 201 31.8
unitig_744.g24652 Utricularia gibba HOM05D001739 ORTHO05D004575 4.0e-16 89.4 190 28.9
AUR62028280 Chenopodium quinoa HOM05D001739 ORTHO05D004575 5.2e-16 89.0 201 31.3
GSVIVG01023097001 Vitis vinifera HOM05D001739 ORTHO05D004575 8.8e-16 88.2 159 35.2
Zm00001eb257110 Zea mays HOM05D001739 ORTHO05D004575 5.7e-15 85.5 199 26.1
SEGI_37036 Sequoiadendron giganteum HOM05D001739 ORTHO05D004575 9.8e-15 84.7 198 29.3
FAN28G0236 Fragaria x ananassa HOM05D001739 ORTHO05D004575 1.3e-14 84.3 223 28.3
THA.LOC104809049 Tarenaya hassleriana HOM05D001739 ORTHO05D004575 2.8e-14 83.2 189 30.7
Nitab4.5_0001565g0110 Nicotiana tabacum HOM05D001739 ORTHO05D004575 4.8e-14 82.4 246 27.2
Prupe.7G186700 Prunus persica HOM05D001739 ORTHO05D004575 1.4e-13 80.9 194 32.5
SEGI_16086 Sequoiadendron giganteum HOM05D001739 ORTHO05D004575 3.1e-13 79.7 190 27.4
HPP92_004359 Vanilla planifolia HOM05D001739 ORTHO05D004575 4.1e-13 79.3 205 28.8
TPR.G34376 Trifolium pratense HOM05D001739 ORTHO05D004575 9.1e-13 78.2 55 72.7
Solyc07g042380.4 Solanum lycopersicum HOM05D001739 ORTHO05D004575 2.0e-12 77.0 160 31.2
AagrBONN_evm.TU.Sc2ySwM_117.3958 Anthoceros agrestis HOM05D001739 ORTHO05D004575 2.7e-12 76.6 199 27.6
DCAR_003861 Daucus carota HOM05D001739 ORTHO05D004575 5.9e-12 75.5 122 38.5
Migut.J00896 Erythranthe guttata HOM05D001739 ORTHO05D004575 1.0e-11 74.7 138 30.4
AUR62025277 Chenopodium quinoa HOM05D001739 ORTHO05D004575 3.8e-11 72.8 164 32.3
FvH4_1g13570 Fragaria vesca HOM05D001739 ORTHO05D004575 1.5e-10 70.9 194 30.4
Mapoly0061s0020 Marchantia polymorpha HOM05D001739 ORTHO05D004575 1.5e-10 70.9 197 27.9
FvH4_1g13610 Fragaria vesca HOM05D001739 ORTHO05D004575 1.9e-10 70.5 194 30.4
FAN19G0770 Fragaria x ananassa HOM05D001739 ORTHO05D004575 1.9e-10 70.5 194 30.4
AL4G30320 Arabidopsis lyrata HOM05D001739 ORTHO05D004575 2.5e-10 70.1 170 29.4
ATR0681G226 Amborella trichopoda HOM05D001739 ORTHO05D004575 3.2e-10 69.7 161 28.0
FAN26G0455 Fragaria x ananassa HOM05D001739 ORTHO05D004575 1.6e-09 67.4 194 29.9
Peaxi162Scf00191g01112 Petunia axillaris HOM05D001739 ORTHO05D004575 1.6e-09 67.4 136 31.6
Carub.0007s1775 Capsella rubella HOM05D001739 ORTHO05D006605 1.0e-08 64.7 198 26.8
Migut.J01753 Erythranthe guttata HOM05D001739 ORTHO05D006605 2.3e-08 63.5 200 27.0
Os02g0782100 Oryza sativa ssp. japonica HOM05D001739 ORTHO05D004575 5.2e-08 62.4 84 39.3
SMO361G0459 Selaginella moellendorffii HOM05D001739 ORTHO05D004575 5.2e-08 62.4 191 24.1
EL10Ac8g19019 Beta vulgaris HOM05D001739 ORTHO05D010736 6.8e-08 62.0 165 28.5
Cre19.g751197 Chlamydomonas reinhardtii HOM05D001739 ORTHO05D004575 1.5e-07 60.8 198 26.3
Solyc04g015940.3 Solanum lycopersicum HOM05D001739 ORTHO05D006605 1.5e-07 60.8 205 26.8
DCAR_009063 Daucus carota HOM05D001739 ORTHO05D006605 3.4e-07 59.7 200 27.0
Sopen04g007950 Solanum pennellii HOM05D001739 ORTHO05D006605 5.7e-07 58.9 205 26.8
AT4G23540 Arabidopsis thaliana HOM05D001739 ORTHO05D006605 7.5e-07 58.5 198 24.7
ECA247G0166 Erigeron canadensis HOM05D001739 ORTHO05D006605 1.7e-06 57.4 175 27.4
TAR623G1060 Trochodendron aralioides HOM05D001739 ORTHO05D006605 2.2e-06 57.0 205 25.9
FvH4_6g18960 Fragaria vesca HOM05D001739 ORTHO05D035276 2.8e-06 56.6 154 29.9
Ah.13g076500 Amaranthus hybridus HOM05D001739 ORTHO05D006605 3.7e-06 56.2 199 26.1
AL7G29870 Arabidopsis lyrata HOM05D001739 ORTHO05D006605 3.7e-06 56.2 203 24.6
SalBow6G2278 Salvia bowleyana HOM05D001739 ORTHO05D006605 4.9e-06 55.8 190 25.3
Ciclev10006456m.g Citrus clementina HOM05D001739 ORTHO05D006605 6.3e-06 55.5 194 25.8
RcHm_v2.0_Chr2g0095131 Rosa chinensis HOM05D001739 ORTHO05D015654 8.3e-06 55.1 195 27.2


User provided reference genes

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