Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G101 Trifolium pratense HOM05D003035 ORTHO05D000440 1.4e-92 342.8 160 100.0
TPR.G35510 Trifolium pratense HOM05D003035 ORTHO05D000440 5.4e-60 234.6 162 73.5
TPR.G1525 Trifolium pratense HOM05D003035 ORTHO05D000440 7.8e-59 230.7 160 68.8
TPR.G30670 Trifolium pratense HOM05D003035 ORTHO05D000440 5.1e-58 228.0 162 71.6
TPR.G1521 Trifolium pratense HOM05D003035 ORTHO05D000440 1.5e-49 199.9 162 61.1
TPR.G35523 Trifolium pratense HOM05D003035 ORTHO05D000440 6.8e-47 191.0 156 62.8
TPR.G18028 Trifolium pratense HOM05D003035 ORTHO05D000440 1.2e-46 190.3 155 61.3
Medtr2g020080 Medicago truncatula HOM05D001286 ORTHO05D000440 3.4e-46 188.7 161 58.4
TPR.G13451 Trifolium pratense HOM05D003035 ORTHO05D000440 3.0e-42 175.6 156 57.1
Medtr2g034630 Medicago truncatula HOM05D003035 ORTHO05D000440 2.6e-30 136.0 160 43.8
Medtr2g020100 Medicago truncatula HOM05D003035 ORTHO05D000440 4.5e-30 135.2 145 53.1
Medtr2g020070 Medicago truncatula HOM05D003035 ORTHO05D000440 2.1e-24 116.3 136 46.3
TPR.G16157 Trifolium pratense HOM05D003035 ORTHO05D000440 4.8e-24 115.2 164 42.7
TPR.G23591 Trifolium pratense HOM05D003035 ORTHO05D000440 3.1e-23 112.5 161 42.2
TPR.G4578 Trifolium pratense HOM05D003035 ORTHO05D000440 2.7e-19 99.4 64 73.4
QL08p010225 Quercus lobata HOM05D003035 ORTHO05D000440 1.8e-15 86.7 152 36.2
QL08p010368 Quercus lobata HOM05D003035 ORTHO05D000440 3.1e-15 85.9 165 36.4
QL08p010398 Quercus lobata HOM05D003035 ORTHO05D000440 4.0e-15 85.5 164 34.1
QL08p010298 Quercus lobata HOM05D003035 ORTHO05D000440 6.9e-15 84.7 152 34.9
Thecc.07G034800 Theobroma cacao HOM05D003035 ORTHO05D000440 9.0e-15 84.3 149 34.9
TWI38G2071 Tripterygium wilfordii HOM05D003035 ORTHO05D000440 1.5e-14 83.6 156 32.1
Rhsim06G0217000 Rhododendron simsii HOM05D003035 ORTHO05D000440 1.3e-13 80.5 167 31.1
Hma1.2p1_1067F.1_g253960 Hydrangea macrophylla HOM05D003035 ORTHO05D000440 1.7e-13 80.1 152 33.6
TWI39G1245 Tripterygium wilfordii HOM05D001286 ORTHO05D000440 2.2e-13 79.7 155 28.4
QL08p010458 Quercus lobata HOM05D003035 ORTHO05D000440 3.8e-13 79.0 166 32.5
QL08p002650 Quercus lobata HOM05D003035 ORTHO05D000440 1.1e-12 77.4 156 29.5
Thecc.07G037800 Theobroma cacao HOM05D003035 ORTHO05D000440 1.9e-12 76.6 159 28.9
Rhsim06G0216900 Rhododendron simsii HOM05D003035 ORTHO05D000440 2.5e-12 76.3 164 32.3
PSO210G1368 Papaver somniferum HOM05D003035 ORTHO05D000440 5.5e-12 75.1 167 34.1
PSO210G1539 Papaver somniferum HOM05D003035 ORTHO05D000440 2.7e-11 72.8 161 32.9
PSO013G0206 Papaver somniferum HOM05D003035 ORTHO05D000440 7.9e-11 71.2 154 28.6
TAR636G2415 Trochodendron aralioides HOM05D001286 ORTHO05D000440 1.8e-10 70.1 148 33.8
Lalb_Chr01g0018111 Lupinus albus HOM05D001286 ORTHO05D000440 2.3e-10 69.7 152 33.6
Duzib268G1496 Durio zibethinus HOM05D003035 ORTHO05D000440 3.0e-10 69.3 154 34.4
Thecc.07G037700 Theobroma cacao HOM05D003035 ORTHO05D000440 3.0e-10 69.3 159 28.9
PSO210G7648 Papaver somniferum HOM05D003035 ORTHO05D000440 5.1e-10 68.6 138 29.7
PSO210G1344 Papaver somniferum HOM05D003035 ORTHO05D000440 6.7e-10 68.2 171 31.6
Carub.0005s2324 Capsella rubella HOM05D001286 ORTHO05D000440 8.7e-10 67.8 142 30.3
Glyma.13G154400 Glycine max HOM05D001286 ORTHO05D000440 8.7e-10 67.8 156 32.1
Cpa.g.sc5.10 Carica papaya HOM05D001286 ORTHO05D000440 1.1e-09 67.4 158 32.9
Cfa016618 Carpinus fangiana HOM05D001286 ORTHO05D000440 1.5e-09 67.0 154 32.5
Manes.08G026100 Manihot esculenta HOM05D001286 ORTHO05D000440 1.5e-09 67.0 156 32.1
Ca_09011_v3 Cicer arietinum L. HOM05D001286 ORTHO05D000440 1.9e-09 66.6 152 30.9
arahy.Tifrunner.gnm1.ann1.2MM3YT Arachis hypogaea HOM05D001286 ORTHO05D000440 2.5e-09 66.2 152 32.2
arahy.Tifrunner.gnm1.ann1.4DR6J6 Arachis hypogaea HOM05D001286 ORTHO05D000440 2.5e-09 66.2 152 32.2
CARHR166590 Cardamine hirsuta HOM05D001286 ORTHO05D000440 2.5e-09 66.2 149 34.2
Phvul.001G190800 Phaseolus vulgaris HOM05D001286 ORTHO05D000440 2.5e-09 66.2 152 33.6
TAR374G1264 Trochodendron aralioides HOM05D001286 ORTHO05D000440 2.5e-09 66.2 149 31.5
VMungo1383G3108 Vigna mungo HOM05D001286 ORTHO05D000440 2.5e-09 66.2 152 33.6
Glyma.03G196600 Glycine max HOM05D001286 ORTHO05D000440 3.3e-09 65.9 152 32.9
Glyma.19G194964 Glycine max HOM05D001286 ORTHO05D000440 3.3e-09 65.9 152 32.9
Lj5g0005331 Lotus japonicus HOM05D001286 ORTHO05D000440 3.3e-09 65.9 152 32.2
Actinidia05421 Actinidia chinensis HOM05D001286 ORTHO05D000440 4.3e-09 65.5 124 33.1
Glyma.10G073700 Glycine max HOM05D001286 ORTHO05D000440 4.3e-09 65.5 156 32.1
Manes.09G054600 Manihot esculenta HOM05D001286 ORTHO05D000440 4.3e-09 65.5 156 32.1
Ca_00899_v3 Cicer arietinum L. HOM05D001286 ORTHO05D000440 5.7e-09 65.1 152 31.6
CiPaw.10G010500 Carya illinoinensis HOM05D001286 ORTHO05D000440 7.4e-09 64.7 156 28.8
Oeu025671.3 Olea europaea HOM05D001286 ORTHO05D000440 7.4e-09 64.7 149 30.2
PSO824G0076 Papaver somniferum HOM05D003035 ORTHO05D000440 7.4e-09 64.7 152 32.2
Psat6g080440 Pisum sativum HOM05D001286 ORTHO05D000440 7.4e-09 64.7 152 31.6
Potri.016G079300 Populus trichocarpa HOM05D001286 ORTHO05D000440 7.4e-09 64.7 156 30.8
AT3G56470 Arabidopsis thaliana HOM05D001286 ORTHO05D000440 9.7e-09 64.3 139 30.9
Haze_19623 Corylus avellana HOM05D001286 ORTHO05D000440 9.7e-09 64.3 154 32.5
Lsat_1_v5_gn_8_77420 Lactuca sativa HOM05D001286 ORTHO05D000440 9.7e-09 64.3 150 32.0
CANSAT64G2057 Cannabis sativa HOM05D001286 ORTHO05D000440 1.3e-08 63.9 156 30.1
ECA248G3255 Erigeron canadensis HOM05D008265 ORTHO05D000440 1.3e-08 63.9 159 31.4
Rhsim01G0045800 Rhododendron simsii HOM05D001286 ORTHO05D000440 1.3e-08 63.9 156 35.3
TAR374G0203 Trochodendron aralioides HOM05D001286 ORTHO05D000440 1.6e-08 63.5 149 30.9
Duzib093G1514 Durio zibethinus HOM05D001286 ORTHO05D000440 2.2e-08 63.2 152 31.6
Ciclev10011976m.g Citrus clementina HOM05D001286 ORTHO05D000440 2.8e-08 62.8 158 31.6
Cc06_g05910 Coffea canephora HOM05D001286 ORTHO05D000440 2.8e-08 62.8 152 29.6
ECA248G0149 Erigeron canadensis HOM05D008265 ORTHO05D000440 2.8e-08 62.8 159 31.4
Thecc.05G090300 Theobroma cacao HOM05D001286 ORTHO05D000440 3.7e-08 62.4 154 31.2
CSS0048691 Camellia sinensis var. sinensis HOM05D001286 ORTHO05D000440 4.8e-08 62.0 124 32.3
Dinv31694 Davidia involucrata HOM05D001286 ORTHO05D000440 4.8e-08 62.0 124 32.3
QL07p038675 Quercus lobata HOM05D001286 ORTHO05D000440 4.8e-08 62.0 152 29.6
AL5G37800 Arabidopsis lyrata HOM05D001286 ORTHO05D000440 6.3e-08 61.6 141 31.9
Duzib106G1385 Durio zibethinus HOM05D001286 ORTHO05D000440 6.3e-08 61.6 152 30.3
PSO210G5554 Papaver somniferum HOM05D003035 ORTHO05D000440 6.3e-08 61.6 164 29.9
Potri.006G212600 Populus trichocarpa HOM05D001286 ORTHO05D000440 6.3e-08 61.6 156 29.5
CARHR253830 Cardamine hirsuta HOM05D001286 ORTHO05D000440 8.2e-08 61.2 145 27.6
Nn5g27741 Nelumbo nucifera HOM05D001286 ORTHO05D000440 8.2e-08 61.2 142 31.7
Sabra06G0163600 Salix brachista HOM05D001286 ORTHO05D000440 8.2e-08 61.2 156 29.5
ECA236G4173 Erigeron canadensis HOM05D001286 ORTHO05D000440 1.1e-07 60.8 150 30.7
AUR62037031 Chenopodium quinoa HOM05D001286 ORTHO05D000440 1.4e-07 60.5 154 31.2
MD14G1023800 Malus domestica HOM05D001286 ORTHO05D000440 1.4e-07 60.5 156 30.1
Solyc09g009880.3 Solanum lycopersicum HOM05D001286 ORTHO05D000440 1.4e-07 60.5 129 38.8
A09p49390 Brassica napus HOM05D001050 ORTHO05D001270 1.8e-07 60.1 139 32.4
BraA09t40392Z Brassica rapa HOM05D001050 ORTHO05D001270 1.8e-07 60.1 139 32.4
HanXRQChr01g0010051 Helianthus annuus HOM05D001286 ORTHO05D000440 1.8e-07 60.1 150 30.7
Rhsim01G0011600 Rhododendron simsii HOM05D001286 ORTHO05D000440 1.8e-07 60.1 152 34.9
CARHR054340 Cardamine hirsuta HOM05D001286 ORTHO05D000440 2.4e-07 59.7 120 33.3
ECA248G0397 Erigeron canadensis HOM05D001286 ORTHO05D000440 2.4e-07 59.7 150 30.0
EL10Ac7g16907 Beta vulgaris HOM05D001286 ORTHO05D000440 3.1e-07 59.3 158 32.3
Lsat_1_v5_gn_5_165000 Lactuca sativa HOM05D001286 ORTHO05D000440 3.1e-07 59.3 156 31.4
Medtr2g020150 Medicago truncatula HOM05D003035 ORTHO05D000440 3.1e-07 59.3 154 28.6
Sabra15G0060500 Salix brachista HOM05D002125 ORTHO05D002105 3.1e-07 59.3 159 30.8
Sopen09g004630 Solanum pennellii HOM05D001286 ORTHO05D000440 3.1e-07 59.3 129 38.0
TAR633G0845 Trochodendron aralioides HOM05D001286 ORTHO05D000440 3.1e-07 59.3 124 31.5
MSTRG.19268 Avicennia marina HOM05D001286 ORTHO05D000440 4.1e-07 58.9 152 29.6
Prupe.7G109000 Prunus persica HOM05D001286 ORTHO05D000440 4.1e-07 58.9 156 28.8
Rhsim01G0011200 Rhododendron simsii HOM05D001286 ORTHO05D000440 4.1e-07 58.9 154 34.4
AUR62006191 Chenopodium quinoa HOM05D001286 ORTHO05D000440 5.3e-07 58.5 154 30.5
DCAR_020742 Daucus carota HOM05D001286 ORTHO05D000440 5.3e-07 58.5 128 32.8
Rhsim01G0011500 Rhododendron simsii HOM05D001286 ORTHO05D000440 5.3e-07 58.5 152 34.2
CAN.G397.56 Capsicum annuum HOM05D001286 ORTHO05D000440 6.9e-07 58.2 128 30.5
Sabra19G0121800 Salix brachista HOM05D001286 ORTHO05D000440 6.9e-07 58.2 161 29.8
PGSC0003DMG400008951 Solanum tuberosum HOM05D001286 ORTHO05D000440 9.0e-07 57.8 129 37.2
TWI77G1030 Tripterygium wilfordii HOM05D001286 ORTHO05D000440 1.2e-06 57.4 150 30.0
Nitab4.5_0000692g0040 Nicotiana tabacum HOM05D001286 ORTHO05D000440 1.5e-06 57.0 127 35.4
Peaxi162Scf00404g00218 Petunia axillaris HOM05D001286 ORTHO05D000440 1.5e-06 57.0 122 32.0
PSO832G3725 Papaver somniferum HOM05D003035 ORTHO05D000440 2.0e-06 56.6 156 29.5
Thhalv10029466m.g Eutrema salsugineum HOM05D001286 ORTHO05D000440 2.6e-06 56.2 111 33.3
Sabra16G0085000 Salix brachista HOM05D001286 ORTHO05D000440 2.6e-06 56.2 153 28.8
Sabra16G0087200 Salix brachista HOM05D001286 ORTHO05D000440 2.6e-06 56.2 153 28.8
SalBow5G2315 Salvia bowleyana HOM05D001286 ORTHO05D000440 2.6e-06 56.2 130 30.8
AL6G44750 Arabidopsis lyrata HOM05D001286 ORTHO05D000440 3.4e-06 55.8 122 30.3
AT4G10660 Arabidopsis thaliana HOM05D001286 ORTHO05D000440 3.4e-06 55.8 127 30.7
AUR62020425 Chenopodium quinoa HOM05D003035 ORTHO05D000440 5.9e-06 55.1 131 28.2
Gohir.A01G205800 Gossypium hirsutum HOM05D001286 ORTHO05D000440 5.9e-06 55.1 152 28.9
Gohir.D01G195200 Gossypium hirsutum HOM05D001286 ORTHO05D000440 5.9e-06 55.1 152 28.9
Gorai.002G239400 Gossypium raimondii HOM05D001286 ORTHO05D000440 5.9e-06 55.1 152 28.9
Haze_19622 Corylus avellana HOM05D001286 ORTHO05D000440 7.7e-06 54.7 137 29.2
A03p29450 Brassica napus HOM05D000315 ORTHO05D000440 1.0e-05 54.3 122 31.1
BraA03t12138Z Brassica rapa HOM05D001286 ORTHO05D000440 1.0e-05 54.3 122 31.1
AUR62034239 Chenopodium quinoa HOM05D003035 ORTHO05D000440 1.0e-05 54.3 63 42.9
ECA248G1816 Erigeron canadensis HOM05D008265 ORTHO05D000440 1.0e-05 54.3 91 31.9
RcHm_v2.0_Chr3g0473881 Rosa chinensis HOM05D001286 ORTHO05D000440 1.0e-05 54.3 128 28.1


User provided reference genes

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