Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G10066 Trifolium pratense HOM05D011527 ORTHO05D009491 2.3e-40 168.3 78 100.0
Phvul.007G129300 Phaseolus vulgaris HOM05D000353 ORTHO05D009491 5.5e-18 94.0 69 53.6
Phvul.L003637 Phaseolus vulgaris HOM05D000353 ORTHO05D009491 5.5e-18 94.0 69 53.6
TPR.G40139 Trifolium pratense HOM05D000096 ORTHO05D000045 5.5e-18 94.0 67 56.7
Medtr6g445520 Medicago truncatula HOM05D000353 ORTHO05D000174 1.8e-16 89.0 69 50.7
Medtr2g048560 Medicago truncatula HOM05D000353 ORTHO05D000174 2.3e-16 88.6 70 52.9
Phvul.006G191400 Phaseolus vulgaris HOM05D011527 ORTHO05D009491 2.3e-16 88.6 69 50.7
Phvul.003G117700 Phaseolus vulgaris HOM05D011527 ORTHO05D009491 3.0e-16 88.2 70 45.7
Phvul.005G096800 Phaseolus vulgaris HOM05D000353 ORTHO05D000174 3.0e-16 88.2 69 49.3
Phvul.008G122133 Phaseolus vulgaris HOM05D011527 ORTHO05D009491 6.8e-16 87.0 69 49.3
Phvul.001G105000 Phaseolus vulgaris HOM05D000353 ORTHO05D009491 1.2e-15 86.3 69 49.3
TPR.G7855 Trifolium pratense HOM05D000096 ORTHO05D000045 1.5e-15 85.9 69 50.7
Phvul.006G016100 Phaseolus vulgaris HOM05D000353 ORTHO05D000174 2.6e-15 85.1 68 48.5
Medtr3g056270 Medicago truncatula HOM05D000353 ORTHO05D000174 2.2e-14 82.0 69 47.8
Medtr4g036240 Medicago truncatula HOM05D000353 ORTHO05D000174 2.2e-14 82.0 69 47.8
Phvul.007G143500 Phaseolus vulgaris HOM05D000353 ORTHO05D009491 4.9e-14 80.9 69 46.4
TPR.G26714 Trifolium pratense HOM05D011524 ORTHO05D009491 8.3e-14 80.1 69 50.7
TPR.G34472 Trifolium pratense HOM05D011524 ORTHO05D009491 8.3e-14 80.1 69 47.8
Lj3g0013474 Lotus japonicus HOM05D000353 ORTHO05D000174 1.1e-13 79.7 67 50.7
TPR.G19823 Trifolium pratense HOM05D011527 ORTHO05D009491 2.4e-13 78.6 69 50.7
TPR.G17919 Trifolium pratense HOM05D011527 ORTHO05D009491 4.1e-13 77.8 69 47.8
TPR.G36881 Trifolium pratense HOM05D011524 ORTHO05D009491 4.1e-13 77.8 67 47.8
Lj1g0004030 Lotus japonicus HOM05D000353 ORTHO05D000174 1.6e-12 75.9 64 48.4
TPR.G35040 Trifolium pratense HOM05D011524 ORTHO05D009491 2.0e-12 75.5 69 47.8
Lj3g0016345 Lotus japonicus HOM05D000353 ORTHO05D000174 2.7e-12 75.1 67 46.3
TPR.G20476 Trifolium pratense HOM05D011524 ORTHO05D009491 2.7e-12 75.1 69 44.9
Lj6g0004966 Lotus japonicus HOM05D011527 ORTHO05D009491 2.9e-11 71.6 72 43.1
Lj6g0022193 Lotus japonicus HOM05D010643 ORTHO05D013332 5.0e-11 70.9 70 42.9
TPR.G16855 Trifolium pratense HOM05D007499 ORTHO05D009491 8.6e-11 70.1 69 39.1
TPR.G15524 Trifolium pratense HOM05D007499 ORTHO05D009491 1.1e-10 69.7 69 39.1
TPR.G27579 Trifolium pratense HOM05D007499 ORTHO05D009491 1.1e-10 69.7 69 37.7
TPR.G26497 Trifolium pratense HOM05D007499 ORTHO05D009491 1.5e-10 69.3 69 39.1
TPR.G14129 Trifolium pratense HOM05D007499 ORTHO05D009491 3.3e-10 68.2 69 37.7
TPR.G39019 Trifolium pratense HOM05D007499 ORTHO05D009491 3.3e-10 68.2 68 39.7
TPR.G39727 Trifolium pratense HOM05D028938 ORTHO05D009491 3.3e-10 68.2 72 38.9
TPR.G17763 Trifolium pratense HOM05D007499 ORTHO05D009491 4.3e-10 67.8 68 38.2
Medtr2g048550 Medicago truncatula HOM05D000353 ORTHO05D000174 5.6e-10 67.4 73 34.2
Medtr2g008650 Medicago truncatula HOM05D000353 ORTHO05D000174 7.3e-10 67.0 69 37.7
Medtr8g479260 Medicago truncatula HOM05D000353 ORTHO05D000174 7.3e-10 67.0 69 37.7
TPR.G30682 Trifolium pratense HOM05D000096 ORTHO05D000045 7.3e-10 67.0 73 37.0
TPR.G38513 Trifolium pratense HOM05D007499 ORTHO05D009491 7.3e-10 67.0 66 39.4
TPR.G8849 Trifolium pratense HOM05D007499 ORTHO05D009491 1.2e-09 66.2 68 38.2
Medtr4g040040 Medicago truncatula HOM05D011527 ORTHO05D000174 1.6e-09 65.9 66 39.4
Medtr8g062030 Medicago truncatula HOM05D000353 ORTHO05D000174 1.6e-09 65.9 68 38.2
TPR.G27599 Trifolium pratense HOM05D007499 ORTHO05D009491 1.6e-09 65.9 69 37.7
TPR.G38734 Trifolium pratense HOM05D027356 ORTHO05D009491 1.6e-09 65.9 69 37.7
Phvul.009G015800 Phaseolus vulgaris HOM05D011527 ORTHO05D009491 2.1e-09 65.5 57 49.1
TPR.G8670 Trifolium pratense HOM05D007499 ORTHO05D009491 2.1e-09 65.5 72 34.7
Lj6g0015228 Lotus japonicus HOM05D007499 ORTHO05D000174 3.6e-09 64.7 74 39.2
LjContig00141g0027033 Lotus japonicus HOM05D007499 ORTHO05D000174 4.7e-09 64.3 76 39.5
Phvul.001G109800 Phaseolus vulgaris HOM05D000353 ORTHO05D000174 4.7e-09 64.3 67 43.3
Phvul.005G095200 Phaseolus vulgaris HOM05D000353 ORTHO05D000174 4.7e-09 64.3 69 43.5
Medtr5g078250 Medicago truncatula HOM05D000353 ORTHO05D000174 6.2e-09 63.9 67 34.3
arahy.Tifrunner.gnm1.ann1.SFEY24 Arachis hypogaea HOM05D000353 ORTHO05D000174 8.0e-09 63.5 65 40.0
TPR.G30051 Trifolium pratense HOM05D000023 ORTHO05D009491 8.0e-09 63.5 69 42.0
TPR.G34060 Trifolium pratense HOM05D011527 ORTHO05D009491 8.0e-09 63.5 69 40.6
arahy.Tifrunner.gnm1.ann1.AKH4BK Arachis hypogaea HOM05D000353 ORTHO05D000174 1.8e-08 62.4 73 32.9
arahy.Tifrunner.gnm1.ann1.CPRZ31 Arachis hypogaea HOM05D000353 ORTHO05D000174 1.8e-08 62.4 73 32.9
arahy.Tifrunner.gnm1.ann1.IYP2GG Arachis hypogaea HOM05D000353 ORTHO05D000174 1.8e-08 62.4 73 32.9
arahy.Tifrunner.gnm1.ann1.J9NJUF Arachis hypogaea HOM05D000353 ORTHO05D000174 1.8e-08 62.4 73 32.9
arahy.Tifrunner.gnm1.ann1.LSFF47 Arachis hypogaea HOM05D000353 ORTHO05D000174 1.8e-08 62.4 73 32.9
arahy.Tifrunner.gnm1.ann1.H3FPA3 Arachis hypogaea HOM05D010000 ORTHO05D009491 2.3e-08 62.0 76 36.8
arahy.Tifrunner.gnm1.ann1.Y6YSHD Arachis hypogaea HOM05D000353 ORTHO05D000174 2.3e-08 62.0 73 32.9
TPR.G39470 Trifolium pratense HOM05D007499 ORTHO05D009491 2.3e-08 62.0 65 35.4
Lj5g0012270 Lotus japonicus HOM05D007499 ORTHO05D000174 4.0e-08 61.2 69 37.7
TPR.G18344 Trifolium pratense HOM05D007499 ORTHO05D009491 4.0e-08 61.2 99 31.3
Phvul.005G044800 Phaseolus vulgaris HOM05D011527 ORTHO05D009491 8.9e-08 60.1 47 53.2
Lj4g0000768 Lotus japonicus HOM05D007499 ORTHO05D000174 2.6e-07 58.5 74 33.8
LjContig00357g0026360 Lotus japonicus HOM05D007499 ORTHO05D009491 3.4e-07 58.2 76 35.5
Lj1g0003435 Lotus japonicus HOM05D007499 ORTHO05D000174 1.3e-06 56.2 76 34.2
LjContig00081g0005726 Lotus japonicus HOM05D007499 ORTHO05D000174 1.3e-06 56.2 76 34.2
TPR.G40188 Trifolium pratense HOM05D007499 ORTHO05D009491 3.7e-06 54.7 49 40.8
LjContig00312_ERROPOS870357g0000618 Lotus japonicus HOM05D007499 ORTHO05D010522 4.9e-06 54.3 70 32.9
Phvul.007G155600 Phaseolus vulgaris HOM05D000353 ORTHO05D009491 4.9e-06 54.3 69 39.1
TPR.G14905 Trifolium pratense HOM05D007499 ORTHO05D009491 4.9e-06 54.3 68 30.9
Medtr4g046077 Medicago truncatula HOM05D007499 ORTHO05D000174 8.3e-06 53.5 69 30.4


User provided reference genes

Program Settings