Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G10009 Trifolium pratense HOM05D007565 ORTHO05D009551 1.6e-82 309.3 152 100.0
Psat1g068880 Pisum sativum HOM05D007565 ORTHO05D009551 1.2e-69 266.5 153 85.0
Glyma.19G030200 Glycine max HOM05D007565 ORTHO05D009551 2.5e-59 232.3 153 73.9
Medtr6g015275 Medicago truncatula HOM05D007565 ORTHO05D009551 3.1e-57 225.3 131 86.3
Lj2g0002665 Lotus japonicus HOM05D007565 ORTHO05D009551 5.3e-57 224.6 152 72.4
Medtr6g015250 Medicago truncatula HOM05D007565 ORTHO05D009551 5.3e-57 224.6 132 84.8
Lalb_Chr02g0158911 Lupinus albus HOM05D007565 ORTHO05D009551 3.4e-56 221.9 152 71.7
arahy.Tifrunner.gnm1.ann1.X5N52Z Arachis hypogaea HOM05D007565 ORTHO05D009551 1.5e-51 206.5 153 66.7
arahy.Tifrunner.gnm1.ann1.GE184H Arachis hypogaea HOM05D007565 ORTHO05D009551 2.2e-50 202.6 153 65.4
Phvul.004G037200 Phaseolus vulgaris HOM05D007565 ORTHO05D009551 4.1e-49 198.4 153 69.3
VMungo0464G0770 Vigna mungo HOM05D007565 ORTHO05D009551 2.9e-47 192.2 158 67.1
Dinv33829 Davidia involucrata HOM05D007565 ORTHO05D009551 2.2e-42 176.0 145 57.9
CANSAT64G0913 Cannabis sativa HOM05D007565 ORTHO05D009551 1.0e-39 167.2 155 54.2
CiPaw.04G055600 Carya illinoinensis HOM05D007565 ORTHO05D009551 8.5e-39 164.1 132 58.3
GSVIVG01032907001 Vitis vinifera HOM05D007565 ORTHO05D009551 1.6e-37 159.8 148 54.7
Eucgr.I02035 Eucalyptus grandis HOM05D007565 ORTHO05D009551 2.1e-37 159.5 148 54.1
PGR004G0757 Punica granatum HOM05D007565 ORTHO05D009551 3.6e-37 158.7 130 59.2
TAR371G0975 Trochodendron aralioides HOM05D007565 ORTHO05D009551 3.0e-36 155.6 145 55.9
HanXRQChr07g0199761 Helianthus annuus HOM05D007565 ORTHO05D009551 5.2e-36 154.8 154 53.9
CSS0012139 Camellia sinensis var. sinensis HOM05D007565 ORTHO05D009551 6.7e-36 154.5 103 68.9
Solyc02g066920.3 Solanum lycopersicum HOM05D007565 ORTHO05D009551 4.4e-35 151.8 138 56.5
PGSC0003DMG400025155 Solanum tuberosum HOM05D007565 ORTHO05D009551 5.7e-35 151.4 111 65.8
TWI60G0367 Tripterygium wilfordii HOM05D007565 ORTHO05D009551 5.7e-35 151.4 133 57.9
ECA238G4035 Erigeron canadensis HOM05D007565 ORTHO05D009551 7.5e-35 151.0 151 53.6
Prupe.3G254800 Prunus persica HOM05D007565 ORTHO05D009551 9.7e-35 150.6 131 57.3
Cc07_g04240 Coffea canephora HOM05D007565 ORTHO05D009551 2.2e-34 149.4 162 52.5
CAN.G398.21 Capsicum annuum HOM05D007565 ORTHO05D009551 2.8e-34 149.1 111 65.8
Actinidia17585 Actinidia chinensis HOM05D007565 ORTHO05D009551 4.8e-34 148.3 109 67.0
Haze_14429 Corylus avellana HOM05D007565 ORTHO05D009551 4.8e-34 148.3 112 62.5
MBI16_g10827_MAGBIO Magnolia biondii HOM05D007565 ORTHO05D009551 6.3e-34 147.9 92 75.0
Cpa.g.sc14.177 Carica papaya HOM05D007565 ORTHO05D009551 8.2e-34 147.5 130 58.5
Manes.01G096100 Manihot esculenta HOM05D007565 ORTHO05D009551 8.2e-34 147.5 120 62.5
Nn4g23433 Nelumbo nucifera HOM05D007565 ORTHO05D009551 8.2e-34 147.5 96 76.0
Sopen02g016110 Solanum pennellii HOM05D007565 ORTHO05D009551 8.2e-34 147.5 117 62.4
Rhsim08G0074900 Rhododendron simsii HOM05D007565 ORTHO05D009551 1.1e-33 147.1 129 57.4
Sabra04G0069500 Salix brachista HOM05D007565 ORTHO05D009551 1.1e-33 147.1 110 64.5
Peaxi162Scf00991g00215 Petunia axillaris HOM05D007565 ORTHO05D009551 1.8e-33 146.4 92 72.8
Gohir.A09G009400 Gossypium hirsutum HOM05D007565 ORTHO05D009551 2.4e-33 146.0 111 64.9
Gohir.D09G008500 Gossypium hirsutum HOM05D007565 ORTHO05D009551 2.4e-33 146.0 111 64.9
Gorai.006G010200 Gossypium raimondii HOM05D007565 ORTHO05D009551 2.4e-33 146.0 111 64.9
Aqoxy3G00508 Aquilegia oxysepala HOM05D007565 ORTHO05D009551 9.1e-33 144.1 98 69.4
Cfa007669 Carpinus fangiana HOM05D007565 ORTHO05D009551 9.1e-33 144.1 112 61.6
MD09G1066900 Malus domestica HOM05D007565 ORTHO05D009551 9.1e-33 144.1 109 63.3
Potri.004G120300 Populus trichocarpa HOM05D007565 ORTHO05D009551 9.1e-33 144.1 111 63.1
EL10Ac2g02475 Beta vulgaris HOM05D007565 ORTHO05D009551 1.2e-32 143.7 93 74.2
AUR62018189 Chenopodium quinoa HOM05D007565 ORTHO05D009551 1.6e-32 143.3 91 74.7
Nitab4.5_0002957g0030 Nicotiana tabacum HOM05D000753 ORTHO05D003622 1.6e-32 143.3 92 70.7
AT5G39210 Arabidopsis thaliana HOM05D007565 ORTHO05D009551 2.7e-32 142.5 153 51.0
AUR62038674 Chenopodium quinoa HOM05D007565 ORTHO05D009551 2.7e-32 142.5 143 53.8
Nitab4.5_0000212g0260 Nicotiana tabacum HOM05D000753 ORTHO05D003622 2.7e-32 142.5 95 68.4
ATR0177G044 Amborella trichopoda HOM05D007565 ORTHO05D009551 3.5e-32 142.1 92 72.8
vmacro18148 Vaccinium macrocarpon HOM05D007565 ORTHO05D009551 3.5e-32 142.1 116 60.3
FvH4_6g46840 Fragaria vesca HOM05D007565 ORTHO05D009551 4.5e-32 141.7 139 54.7
Lsat_1_v5_gn_2_90121 Lactuca sativa HOM05D007565 ORTHO05D009551 4.5e-32 141.7 152 53.3
DCAR_025432 Daucus carota HOM05D007565 ORTHO05D009551 1.3e-31 140.2 138 55.1
FAN02G0614 Fragaria x ananassa HOM05D007565 ORTHO05D009551 2.2e-31 139.4 92 71.7
FAN09G3824 Fragaria x ananassa HOM05D007565 ORTHO05D009551 2.2e-31 139.4 92 71.7
FAN14G1390 Fragaria x ananassa HOM05D007565 ORTHO05D009551 2.2e-31 139.4 92 71.7
Atru.chr8.429 Acer truncatum HOM05D007565 ORTHO05D009551 2.9e-31 139.0 145 53.8
CDE10G0935 Ceratophyllum demersum HOM05D007565 ORTHO05D009551 3.8e-31 138.7 96 67.7
Migut.H00623 Erythranthe guttata HOM05D007565 ORTHO05D009551 5.0e-31 138.3 92 67.4
FAN05G3080 Fragaria x ananassa HOM05D007565 ORTHO05D009551 5.0e-31 138.3 139 54.0
RcHm_v2.0_Chr2g0165831 Rosa chinensis HOM05D007565 ORTHO05D009551 5.0e-31 138.3 96 67.7
CsaV3_4G009160 Cucumis sativus L. HOM05D007565 ORTHO05D009551 6.5e-31 137.9 117 57.3
EL10Ac2g03143 Beta vulgaris HOM05D007565 ORTHO05D009551 1.1e-30 137.1 79 79.7
QL02p067580 Quercus lobata HOM05D007565 ORTHO05D009551 1.1e-30 137.1 90 68.9
SalBow1G1387 Salvia bowleyana HOM05D007565 ORTHO05D009551 1.1e-30 137.1 87 69.0
SalBow1G4541 Salvia bowleyana HOM05D007565 ORTHO05D009551 1.1e-30 137.1 87 69.0
Thhalv10027973m.g Eutrema salsugineum HOM05D007565 ORTHO05D009551 1.9e-30 136.3 110 60.9
PSO478G3761 Papaver somniferum HOM05D007565 ORTHO05D009551 2.5e-30 136.0 158 47.5
Sp7g02770 Schrenkiella parvula HOM05D007565 ORTHO05D009551 3.2e-30 135.6 157 47.8
THA.LOC104822868 Tarenaya hassleriana HOM05D007565 ORTHO05D009551 5.5e-30 134.8 160 45.6
MSTRG.2997 Avicennia marina HOM05D007565 ORTHO05D009551 7.2e-30 134.4 89 66.3
BcaC02g08856 Brassica carinata HOM05D007565 ORTHO05D009551 9.4e-30 134.0 99 62.6
C04p49800 Brassica napus HOM05D007565 ORTHO05D009551 9.4e-30 134.0 99 62.6
BolC4t26571H Brassica oleracea HOM05D007565 ORTHO05D009551 9.4e-30 134.0 99 62.6
ClCG07G016310 Citrullus lanatus HOM05D007565 ORTHO05D009551 9.4e-30 134.0 96 63.5
Carub.0007s3671 Capsella rubella HOM05D007565 ORTHO05D009551 1.2e-29 133.7 96 63.5
CARHR263200 Cardamine hirsuta HOM05D007565 ORTHO05D009551 1.6e-29 133.3 158 49.4
Sed0016543 Sechium edule HOM05D007565 ORTHO05D009551 2.1e-29 132.9 96 62.5
BcaB06g27735 Brassica carinata HOM05D007565 ORTHO05D009551 2.7e-29 132.5 91 67.0
Aa31LG9G16710 Aethionema arabicum HOM05D007565 ORTHO05D009551 3.6e-29 132.1 92 67.4
unitig_736.g22275 Utricularia gibba HOM05D007565 ORTHO05D009551 4.7e-29 131.7 100 62.0
A04p15530 Brassica napus HOM05D007565 ORTHO05D009551 6.1e-29 131.3 96 62.5
BraA04t17189Z Brassica rapa HOM05D007565 ORTHO05D009551 6.1e-29 131.3 96 62.5
MELO3C024877.2 Cucumis melo HOM05D007565 ORTHO05D009551 6.8e-28 127.9 131 48.1
AL7G51250 Arabidopsis lyrata HOM05D007565 ORTHO05D009551 8.8e-28 127.5 154 47.4
Ciclev10012981m.g Citrus clementina HOM05D007565 ORTHO05D009551 2.6e-27 125.9 158 48.7
Os01g0763700 Oryza sativa ssp. japonica HOM05D007565 ORTHO05D009551 2.6e-27 125.9 84 65.5
Lju41C3T7 Lonicera japonica HOM05D007565 ORTHO05D009551 9.8e-27 124.0 88 65.9
COL.COLO4_04935 Corchorus olitorius HOM05D007565 ORTHO05D009551 1.3e-26 123.6 75 72.0
Mapoly0001s0042 Marchantia polymorpha HOM05D007565 ORTHO05D009551 7.2e-22 107.8 81 56.8
Pp3c15_1410 Physcomitrium patens HOM05D007565 ORTHO05D009551 2.8e-21 105.9 78 56.4
BcaC02g08855 Brassica carinata HOM05D007565 ORTHO05D009551 4.4e-19 98.6 99 52.5
BcaC02g08857 Brassica carinata HOM05D007565 ORTHO05D009551 4.4e-19 98.6 99 52.5
SMO133G0016 Selaginella moellendorffii HOM05D007565 ORTHO05D009551 4.4e-19 98.6 80 53.8
TPR.G36332 Trifolium pratense HOM05D007565 ORTHO05D009551 7.5e-19 97.8 49 89.8
AagrBONN_evm.TU.Sc2ySwM_362.2072 Anthoceros agrestis HOM05D007565 ORTHO05D009551 9.8e-19 97.4 78 57.7
CDE10G1057 Ceratophyllum demersum HOM05D000058 ORTHO05D000077 1.3e-18 97.1 74 62.2
SEGI_38587 Sequoiadendron giganteum HOM05D007565 ORTHO05D009551 3.1e-17 92.4 89 51.7
MBI19_g17444_MAGBIO Magnolia biondii HOM05D000545 ORTHO05D000539 2.0e-11 73.2 47 72.3


User provided reference genes

Program Settings