Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
TPR.G10008 Trifolium pratense HOM05D007413 ORTHO05D009357 6.1e-46 187.2 99 100.0
Psat1g067640 Pisum sativum HOM05D007413 ORTHO05D009357 4.7e-38 161.0 96 90.6
Medtr6g015150 Medicago truncatula HOM05D007413 ORTHO05D009357 4.7e-22 107.8 60 91.7
Lj2g0007962 Lotus japonicus HOM05D007413 ORTHO05D009357 5.2e-21 104.4 112 56.2
Lalb_Chr06g0174991 Lupinus albus HOM05D007413 ORTHO05D009357 2.2e-19 99.0 102 60.8
Lalb_Chr02g0158971 Lupinus albus HOM05D007413 ORTHO05D009357 3.2e-18 95.1 107 54.2
VMungo0464G1276 Vigna mungo HOM05D007413 ORTHO05D009357 4.1e-18 94.7 119 54.6
Glyma.13G057000 Glycine max HOM05D007413 ORTHO05D009357 3.5e-17 91.7 117 51.3
Lalb_Chr21g0318381 Lupinus albus HOM05D007413 ORTHO05D009357 6.0e-17 90.9 114 54.4
Phvul.004G035200 Phaseolus vulgaris HOM05D007413 ORTHO05D009357 1.3e-16 89.7 122 50.8
Potri.017G093000 Populus trichocarpa HOM05D007413 ORTHO05D009357 9.5e-15 83.6 98 49.0
Hma1.2p1_0481F.1_g162070 Hydrangea macrophylla HOM05D007413 ORTHO05D009357 1.1e-13 80.1 77 57.1
Manes.02G054200 Manihot esculenta HOM05D007413 ORTHO05D009357 3.1e-13 78.6 100 47.0
Sopen02g033450 Solanum pennellii HOM05D007413 ORTHO05D009357 3.1e-13 78.6 80 56.2
Cfa007655 Carpinus fangiana HOM05D007413 ORTHO05D009357 6.8e-13 77.4 103 46.6
CAN.G206.219 Capsicum annuum HOM05D007413 ORTHO05D009357 2.0e-12 75.9 63 58.7
Potri.004G119600 Populus trichocarpa HOM05D007413 ORTHO05D009357 2.0e-12 75.9 102 43.1
QL02p067998 Quercus lobata HOM05D007413 ORTHO05D009357 4.4e-12 74.7 94 41.5
Sabra17G0082000 Salix brachista HOM05D007413 ORTHO05D009357 4.4e-12 74.7 92 50.0
Solyc02g088740.1 Solanum lycopersicum HOM05D007413 ORTHO05D009357 4.4e-12 74.7 80 55.0
Manes.01G097200 Manihot esculenta HOM05D007413 ORTHO05D009357 5.8e-12 74.3 105 45.7
Cpa.g.sc3362.1 Carica papaya HOM05D007413 ORTHO05D009357 7.5e-12 73.9 62 56.5
Ciclev10013609m.g Citrus clementina HOM05D007413 ORTHO05D009357 9.9e-12 73.6 84 54.8
Nitab4.5_0010051g0020 Nicotiana tabacum HOM05D007413 ORTHO05D009357 9.9e-12 73.6 86 47.7
Sabra04G0069100 Salix brachista HOM05D007413 ORTHO05D009357 1.3e-11 73.2 72 52.8
Oeu007062.1 Olea europaea HOM05D007413 ORTHO05D009357 1.7e-11 72.8 59 59.3
Aqoxy3G03598 Aquilegia oxysepala HOM05D007413 ORTHO05D009357 2.2e-11 72.4 109 41.3
Carub.0005s0809 Capsella rubella HOM05D007413 ORTHO05D009357 4.9e-11 71.2 86 46.5
Nitab4.5_0000565g0230 Nicotiana tabacum HOM05D007413 ORTHO05D009357 6.4e-11 70.9 94 44.7
Migut.K01283 Erythranthe guttata HOM05D007413 ORTHO05D009357 8.3e-11 70.5 82 52.4
CANSAT64G0406 Cannabis sativa HOM05D007413 ORTHO05D009357 1.4e-10 69.7 96 42.7
Prupe.3G256400 Prunus persica HOM05D007413 ORTHO05D009357 1.4e-10 69.7 54 63.0
TWI34G0597 Tripterygium wilfordii HOM05D007413 ORTHO05D009357 1.4e-10 69.7 93 49.5
FvH4_6g47010 Fragaria vesca HOM05D007413 ORTHO05D009357 2.4e-10 68.9 67 53.7
FAN02G2783 Fragaria x ananassa HOM05D007413 ORTHO05D009357 2.4e-10 68.9 67 52.2
FAN09G1793 Fragaria x ananassa HOM05D007413 ORTHO05D009357 2.4e-10 68.9 67 53.7
FAN14G4532 Fragaria x ananassa HOM05D007413 ORTHO05D009357 2.4e-10 68.9 67 53.7
Oeu062157.1 Olea europaea HOM05D007413 ORTHO05D009357 2.4e-10 68.9 96 46.9
Cc07_g04120 Coffea canephora HOM05D007413 ORTHO05D009357 4.1e-10 68.2 54 57.4
AL5G19460 Arabidopsis lyrata HOM05D007413 ORTHO05D009357 5.4e-10 67.8 91 49.5
Nn4g23392 Nelumbo nucifera HOM05D007413 ORTHO05D009357 5.4e-10 67.8 94 46.8
SalBow1G0329 Salvia bowleyana HOM05D007413 ORTHO05D009357 9.2e-10 67.0 59 55.9
Eucgr.I02025 Eucalyptus grandis HOM05D007413 ORTHO05D009357 1.2e-09 66.6 78 52.6
FAN05G2048 Fragaria x ananassa HOM05D007413 ORTHO05D009357 1.2e-09 66.6 67 52.2
Migut.H00635 Erythranthe guttata HOM05D007413 ORTHO05D009357 1.6e-09 66.2 88 44.3
Aa31LG9G16690 Aethionema arabicum HOM05D007413 ORTHO05D009357 2.1e-09 65.9 68 51.5
THA.LOC109116393 Tarenaya hassleriana HOM05D007413 ORTHO05D009357 2.1e-09 65.9 67 53.7
Gohir.A05G371900 Gossypium hirsutum HOM05D007413 ORTHO05D009357 2.7e-09 65.5 107 40.2
CAN.G398.10 Capsicum annuum HOM05D007413 ORTHO05D009357 3.5e-09 65.1 80 43.8
DCAR_011043 Daucus carota HOM05D007413 ORTHO05D009357 4.6e-09 64.7 56 51.8
Gorai.012G049200 Gossypium raimondii HOM05D007413 ORTHO05D009357 4.6e-09 64.7 107 39.3
MD17G1057900 Malus domestica HOM05D007413 ORTHO05D009357 6.0e-09 64.3 71 49.3
Nn3g17420 Nelumbo nucifera HOM05D007413 ORTHO05D009357 6.0e-09 64.3 88 46.6
Aa31LG2G3920 Aethionema arabicum HOM05D007413 ORTHO05D009357 7.8e-09 63.9 97 42.3
Carub.0007s3668 Capsella rubella HOM05D007413 ORTHO05D009357 7.8e-09 63.9 82 42.7
CiPaw.03G089400 Carya illinoinensis HOM05D007413 ORTHO05D009357 7.8e-09 63.9 104 44.2
COL.COLO4_00052 Corchorus olitorius HOM05D007413 ORTHO05D009357 7.8e-09 63.9 66 54.5
MD09G1064600 Malus domestica HOM05D007413 ORTHO05D009357 7.8e-09 63.9 93 43.0
CSS0018963 Camellia sinensis var. sinensis HOM05D007413 ORTHO05D009357 1.0e-08 63.5 80 46.2
Oeu010247.1 Olea europaea HOM05D007413 ORTHO05D009357 1.0e-08 63.5 87 48.3
Solyc02g066970.1 Solanum lycopersicum HOM05D007413 ORTHO05D009357 1.0e-08 63.5 59 52.5
Actinidia26249 Actinidia chinensis HOM05D007413 ORTHO05D009357 1.3e-08 63.2 78 47.4
Sopen02g016170 Solanum pennellii HOM05D007413 ORTHO05D009357 1.3e-08 63.2 59 54.2
THA.LOC104825781 Tarenaya hassleriana HOM05D007413 ORTHO05D009357 1.3e-08 63.2 87 47.1
RcHm_v2.0_Chr2g0166071 Rosa chinensis HOM05D007413 ORTHO05D009357 2.3e-08 62.4 65 52.3
SalBow1G6503 Salvia bowleyana HOM05D007413 ORTHO05D009357 2.3e-08 62.4 72 43.1
Thecc.04G093400 Theobroma cacao HOM05D007413 ORTHO05D009357 2.3e-08 62.4 107 39.3
Sc14g0006230 Simmondsia chinensis HOM05D007413 ORTHO05D009357 3.0e-08 62.0 81 43.2
unitig_62.g23378 Utricularia gibba HOM05D007413 ORTHO05D009357 3.0e-08 62.0 61 49.2
AL7G51220 Arabidopsis lyrata HOM05D007413 ORTHO05D009357 3.9e-08 61.6 73 45.2
CSS0009905 Camellia sinensis var. sinensis HOM05D007413 ORTHO05D009357 6.6e-08 60.8 89 42.7
CSS0018085 Camellia sinensis var. sinensis HOM05D007413 ORTHO05D009357 6.6e-08 60.8 89 42.7
Gohir.D04G043900 Gossypium hirsutum HOM05D007413 ORTHO05D009357 6.6e-08 60.8 107 38.3
PGSC0003DMG400025144 Solanum tuberosum HOM05D007413 ORTHO05D009357 6.6e-08 60.8 59 50.8
AT3G29370 Arabidopsis thaliana HOM05D007413 ORTHO05D009357 2.5e-07 58.9 94 42.6
Lsat_1_v5_gn_2_87601 Lactuca sativa HOM05D007413 ORTHO05D009357 2.5e-07 58.9 84 40.5
Sp7g02750 Schrenkiella parvula HOM05D007413 ORTHO05D009357 2.5e-07 58.9 96 39.6
Thhalv10027993m.g Eutrema salsugineum HOM05D007413 ORTHO05D009357 3.3e-07 58.5 107 40.2
SGA_v2.0_scaffold148G36473 Striga asiatica HOM05D007413 ORTHO05D009357 3.3e-07 58.5 82 45.1
PGR004G0469 Punica granatum HOM05D007413 ORTHO05D009357 4.3e-07 58.2 75 41.3
Lsat_1_v5_gn_4_171221 Lactuca sativa HOM05D007413 ORTHO05D009357 7.3e-07 57.4 106 39.6
ClCG11G004700 Citrullus lanatus HOM05D007413 ORTHO05D009357 9.5e-07 57.0 121 37.2
Nitab4.5_0005916g0020 Nicotiana tabacum HOM05D007413 ORTHO05D009357 1.2e-06 56.6 74 47.3
MELO3C024851.2 Cucumis melo HOM05D007413 ORTHO05D009357 1.6e-06 56.2 90 38.9
CARHR263170 Cardamine hirsuta HOM05D007413 ORTHO05D009357 2.1e-06 55.8 108 37.0
MELO3C022028.2 Cucumis melo HOM05D007413 ORTHO05D009357 2.1e-06 55.8 117 36.8
ATR0064G025 Amborella trichopoda HOM05D007413 ORTHO05D009357 2.8e-06 55.5 69 47.8
AT5G39240 Arabidopsis thaliana HOM05D007413 ORTHO05D009357 2.8e-06 55.5 102 36.3
BcaB06g27281 Brassica carinata HOM05D007413 ORTHO05D009357 2.8e-06 55.5 110 38.2
ClCG07G007410 Citrullus lanatus HOM05D007413 ORTHO05D009357 2.8e-06 55.5 70 44.3
TAR629G1767 Trochodendron aralioides HOM05D007413 ORTHO05D009357 3.6e-06 55.1 114 36.8
Duzib147G0133 Durio zibethinus HOM05D007413 ORTHO05D009357 4.7e-06 54.7 91 41.8
Sed0019528 Sechium edule HOM05D007413 ORTHO05D009357 6.2e-06 54.3 103 38.8
Rhsim08G0074700 Rhododendron simsii HOM05D007413 ORTHO05D009357 8.1e-06 53.9 39 64.1


User provided reference genes

Program Settings