Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
THA.LOC109116670 Tarenaya hassleriana HOM05D002873 ORTHO05D002978 1.9e-16 88.2 48 100.0
THA.LOC109117084 Tarenaya hassleriana HOM05D002873 ORTHO05D002978 4.5e-10 67.0 46 78.3
A02p10830 Brassica napus HOM05D002873 ORTHO05D002978 8.4e-09 62.8 46 71.7
BraA02t06145Z Brassica rapa HOM05D002873 ORTHO05D002978 8.4e-09 62.8 46 71.7
Sc10g0001460 Simmondsia chinensis HOM05D002873 ORTHO05D002978 1.1e-08 62.4 41 82.9
BcaC03g14385 Brassica carinata HOM05D002873 ORTHO05D002978 2.5e-08 61.2 46 69.6
C02p17950 Brassica napus HOM05D002873 ORTHO05D002978 2.5e-08 61.2 46 69.6
BolC2t07926H Brassica oleracea HOM05D002873 ORTHO05D002978 2.5e-08 61.2 46 69.6
Lalb_Chr04g0258251 Lupinus albus HOM05D002873 ORTHO05D002978 4.2e-08 60.5 43 74.4
TWI34G1371 Tripterygium wilfordii HOM05D002873 ORTHO05D002978 4.2e-08 60.5 46 67.4
Prupe.3G244200 Prunus persica HOM05D002873 ORTHO05D002978 5.5e-08 60.1 46 67.4
Prupe.3G244300 Prunus persica HOM05D002873 ORTHO05D002978 5.5e-08 60.1 46 67.4
Prupe.3G244600 Prunus persica HOM05D002873 ORTHO05D002978 5.5e-08 60.1 46 67.4
Prupe.3G244100 Prunus persica HOM05D002873 ORTHO05D002978 9.3e-08 59.3 46 67.4
Prupe.3G244500 Prunus persica HOM05D002873 ORTHO05D002978 1.6e-07 58.5 46 65.2
FvH4_6g45800 Fragaria vesca HOM05D002873 ORTHO05D002978 2.1e-07 58.2 42 73.8
FAN09G4276 Fragaria x ananassa HOM05D002873 ORTHO05D002978 2.1e-07 58.2 42 73.8
FAN14G0065 Fragaria x ananassa HOM05D003981 ORTHO05D003666 2.1e-07 58.2 42 73.8
BcaC01g04444 Brassica carinata HOM05D002873 ORTHO05D002978 3.5e-07 57.4 46 67.4
C03p40070 Brassica napus HOM05D002873 ORTHO05D002978 3.5e-07 57.4 46 67.4
BolC3t16273H Brassica oleracea HOM05D002873 ORTHO05D002978 3.5e-07 57.4 46 67.4
Haze_14075 Corylus avellana HOM05D002873 ORTHO05D002978 3.5e-07 57.4 46 65.2
Eucgr.I02095 Eucalyptus grandis HOM05D002873 ORTHO05D002978 3.5e-07 57.4 41 75.6
THA.LOC109116088 Tarenaya hassleriana HOM05D002873 ORTHO05D002978 3.5e-07 57.4 46 69.6
Potri.017G108400 Populus trichocarpa HOM05D002873 ORTHO05D002978 4.6e-07 57.0 38 78.9
Prupe.3G244400 Prunus persica HOM05D002873 ORTHO05D002978 4.6e-07 57.0 46 63.0
CARHR288730 Cardamine hirsuta HOM05D002873 ORTHO05D002978 6.0e-07 56.6 36 86.1
RcHm_v2.0_Chr2g0163991 Rosa chinensis HOM05D002873 ORTHO05D002978 6.0e-07 56.6 44 68.2
AL8G28870 Arabidopsis lyrata HOM05D002873 ORTHO05D002978 7.9e-07 56.2 36 83.3
FAN02G0494 Fragaria x ananassa HOM05D002873 ORTHO05D002978 7.9e-07 56.2 39 76.9
PGR042G3018 Punica granatum HOM05D002873 ORTHO05D002978 7.9e-07 56.2 36 83.3
Sed0008680 Sechium edule HOM05D002873 ORTHO05D002978 7.9e-07 56.2 46 65.2
Thhalv10015216m.g Eutrema salsugineum HOM05D002873 ORTHO05D002978 1.0e-06 55.8 36 83.3
Eucgr.J01446 Eucalyptus grandis HOM05D002873 ORTHO05D002978 1.3e-06 55.5 40 72.5
Thhalv10028020m.g Eutrema salsugineum HOM05D002873 ORTHO05D002978 1.3e-06 55.5 36 83.3
Potri.017G108500 Populus trichocarpa HOM05D002873 ORTHO05D002978 1.3e-06 55.5 41 68.3
C09p43800 Brassica napus HOM05D002873 ORTHO05D002978 1.8e-06 55.1 35 82.9
BolC9t57265H Brassica oleracea HOM05D002873 ORTHO05D002978 1.8e-06 55.1 35 82.9
MELO3C022079.2 Cucumis melo HOM05D002873 ORTHO05D002978 1.8e-06 55.1 34 85.3
Sed0026183 Sechium edule HOM05D002873 ORTHO05D002978 1.8e-06 55.1 38 76.3
AT5G53820 Arabidopsis thaliana HOM05D002873 ORTHO05D002978 2.3e-06 54.7 36 80.6
Carub.0008s1411 Capsella rubella HOM05D002873 ORTHO05D002978 2.3e-06 54.7 35 82.9
CARHR266960 Cardamine hirsuta HOM05D002873 ORTHO05D002978 2.3e-06 54.7 35 82.9
Lalb_Chr17g0336681 Lupinus albus HOM05D002873 ORTHO05D002978 2.3e-06 54.7 44 68.2
Sp6g15890 Schrenkiella parvula HOM05D002873 ORTHO05D002978 2.3e-06 54.7 36 80.6
arahy.Tifrunner.gnm1.ann1.4T36CH Arachis hypogaea HOM05D002873 ORTHO05D002978 3.0e-06 54.3 43 65.1
arahy.Tifrunner.gnm1.ann1.JTM1YJ Arachis hypogaea HOM05D002873 ORTHO05D002978 3.0e-06 54.3 43 65.1
Ca_06717_v3 Cicer arietinum L. HOM05D002873 ORTHO05D002978 3.0e-06 54.3 40 70.0
MELO3C033537.2 Cucumis melo HOM05D002873 ORTHO05D002978 3.0e-06 54.3 33 84.8
Prupe.3G244700 Prunus persica HOM05D002873 ORTHO05D002978 3.0e-06 54.3 46 63.0
Sp3g01520 Schrenkiella parvula HOM05D002873 ORTHO05D002978 3.0e-06 54.3 46 63.0
Sed0018699 Sechium edule HOM05D002873 ORTHO05D002978 3.0e-06 54.3 39 71.8
BcaB08g35740 Brassica carinata HOM05D002873 ORTHO05D002978 3.9e-06 53.9 35 80.0
A03p32950 Brassica napus HOM05D002873 ORTHO05D002978 3.9e-06 53.9 43 67.4
A10p11190 Brassica napus HOM05D002873 ORTHO05D002978 3.9e-06 53.9 35 80.0
BraA03t12463Z Brassica rapa HOM05D002873 ORTHO05D002978 3.9e-06 53.9 43 67.4
BraA10t43210Z Brassica rapa HOM05D002873 ORTHO05D002978 3.9e-06 53.9 36 77.8
Sed0007664 Sechium edule HOM05D002873 ORTHO05D002978 3.9e-06 53.9 33 84.8
FvH4_6g45802 Fragaria vesca HOM05D002873 ORTHO05D002978 5.1e-06 53.5 35 80.0
FAN05G0873 Fragaria x ananassa HOM05D002873 ORTHO05D002978 5.1e-06 53.5 35 80.0
Sed0026500 Sechium edule HOM05D002873 ORTHO05D002978 5.1e-06 53.5 35 80.0
THA.LOC109116986 Tarenaya hassleriana HOM05D002873 ORTHO05D002978 5.1e-06 53.5 38 76.3
Rhsim08G0081300 Rhododendron simsii HOM05D002873 ORTHO05D002978 6.7e-06 53.1 41 68.3
BcaC01g04554 Brassica carinata HOM05D002873 ORTHO05D002978 8.7e-06 52.8 46 60.9
Cpa.g.sc188.26 Carica papaya HOM05D002873 ORTHO05D002978 8.7e-06 52.8 38 78.9
CsaV3_5G004620 Cucumis sativus L. HOM05D002873 ORTHO05D002978 8.7e-06 52.8 36 77.8
Lalb_Chr21g0318071 Lupinus albus HOM05D015498 ORTHO05D015153 8.7e-06 52.8 32 87.5
Peaxi162Scf00019g00065 Petunia axillaris HOM05D002873 ORTHO05D002978 8.7e-06 52.8 41 65.9
Peaxi162Scf01056g00020 Petunia axillaris HOM05D002873 ORTHO05D002978 8.7e-06 52.8 38 73.7
Potri.017G108300 Populus trichocarpa HOM05D002873 ORTHO05D002978 8.7e-06 52.8 35 77.1
Potri.017G108350 Populus trichocarpa HOM05D002873 ORTHO05D002978 8.7e-06 52.8 35 77.1
Rhsim10G0062500 Rhododendron simsii HOM05D007347 ORTHO05D009296 8.7e-06 52.8 45 64.4
Sed0018450 Sechium edule HOM05D002873 ORTHO05D002978 8.7e-06 52.8 35 77.1


User provided reference genes

Program Settings