Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
THA.LOC104826571 Tarenaya hassleriana HOM05D001921 ORTHO05D001784 4.2e-93 344.7 183 100.0
Thhalv10029029m.g Eutrema salsugineum HOM05D001921 ORTHO05D001784 2.4e-19 99.8 129 47.3
AL6G51210 Arabidopsis lyrata HOM05D001921 ORTHO05D001784 1.4e-16 90.5 158 39.9
CARHR249650 Cardamine hirsuta HOM05D001921 ORTHO05D001784 1.4e-16 90.5 141 46.8
Carub.0006s3519 Capsella rubella HOM05D001921 ORTHO05D001784 1.2e-15 87.4 132 43.2
Cpa.g.sc46.103 Carica papaya HOM05D001921 ORTHO05D001784 7.9e-15 84.7 159 39.0
BcaB01g02085 Brassica carinata HOM05D001921 ORTHO05D001784 1.8e-14 83.6 124 45.2
Cfa020875 Carpinus fangiana HOM05D001921 ORTHO05D001784 1.1e-13 80.9 167 37.1
AT4G02040 Arabidopsis thaliana HOM05D001921 ORTHO05D001784 1.5e-13 80.5 155 36.1
Sp6g01920 Schrenkiella parvula HOM05D001921 ORTHO05D001784 1.5e-13 80.5 163 37.4
COL.COLO4_18732 Corchorus olitorius HOM05D001921 ORTHO05D001784 5.7e-13 78.6 159 40.3
Haze_19306 Corylus avellana HOM05D001921 ORTHO05D001784 1.3e-12 77.4 167 37.1
Duzib187G0406 Durio zibethinus HOM05D001921 ORTHO05D001784 1.3e-12 77.4 159 39.0
BolC9t53094H Brassica oleracea HOM05D001921 ORTHO05D001784 2.2e-12 76.6 133 39.8
BcaB01g02086 Brassica carinata HOM05D001921 ORTHO05D001784 2.8e-12 76.3 118 44.1
BcaC04g24030 Brassica carinata HOM05D001921 ORTHO05D001784 1.4e-11 73.9 131 38.9
TWI34G0586 Tripterygium wilfordii HOM05D001921 ORTHO05D001784 1.8e-11 73.6 162 35.8
CiPaw.15G179300 Carya illinoinensis HOM05D001921 ORTHO05D001784 3.1e-11 72.8 160 36.9
Thecc.09G037400 Theobroma cacao HOM05D001921 ORTHO05D001784 4.1e-11 72.4 122 42.6
C09p01610 Brassica napus HOM05D001921 ORTHO05D001784 5.3e-11 72.0 131 38.9
Gohir.A06G095900 Gossypium hirsutum HOM05D001921 ORTHO05D001784 5.3e-11 72.0 158 37.3
FAN26G0252 Fragaria x ananassa HOM05D001921 ORTHO05D001784 6.9e-11 71.6 167 36.5
QL02p091546 Quercus lobata HOM05D001921 ORTHO05D001784 6.9e-11 71.6 159 36.5
Manes.06G040800 Manihot esculenta HOM05D001921 ORTHO05D001784 9.0e-11 71.2 169 37.3
Prupe.7G253300 Prunus persica HOM05D001921 ORTHO05D001784 1.5e-10 70.5 156 39.1
FAN23G0500 Fragaria x ananassa HOM05D001921 ORTHO05D001784 2.0e-10 70.1 167 34.7
Gohir.D06G096000 Gossypium hirsutum HOM05D001921 ORTHO05D001784 2.6e-10 69.7 122 41.0
Lalb_Chr11g0072831 Lupinus albus HOM05D001921 ORTHO05D001784 3.4e-10 69.3 142 38.7
A09p01490 Brassica napus HOM05D001921 ORTHO05D001784 4.5e-10 68.9 129 36.4
BraA09t35810Z Brassica rapa HOM05D001921 ORTHO05D001784 4.5e-10 68.9 129 36.4
FvH4_1g01550 Fragaria vesca HOM05D001921 ORTHO05D001784 4.5e-10 68.9 166 33.7
FAN19G1379 Fragaria x ananassa HOM05D001921 ORTHO05D001784 4.5e-10 68.9 166 33.7
Gorai.010G110700 Gossypium raimondii HOM05D001921 ORTHO05D001784 4.5e-10 68.9 122 40.2
TWI63G1839 Tripterygium wilfordii HOM05D001921 ORTHO05D001784 7.7e-10 68.2 156 37.2
MD15G1158100 Malus domestica HOM05D001921 ORTHO05D001784 1.0e-09 67.8 158 36.7
Thecc.09G018900 Theobroma cacao HOM05D001921 ORTHO05D001784 1.0e-09 67.8 131 37.4
Ciclev10009542m.g Citrus clementina HOM05D001921 ORTHO05D001784 1.3e-09 67.4 127 38.6
Gohir.A06G095800 Gossypium hirsutum HOM05D001921 ORTHO05D001784 1.3e-09 67.4 150 36.0
Gorai.010G110500 Gossypium raimondii HOM05D001921 ORTHO05D001784 1.3e-09 67.4 150 36.0
CSS0005509 Camellia sinensis var. sinensis HOM05D001921 ORTHO05D001784 1.7e-09 67.0 160 36.2
RcHm_v2.0_Chr2g0086511 Rosa chinensis HOM05D001921 ORTHO05D001784 1.7e-09 67.0 156 35.9
Gohir.D06G095900 Gossypium hirsutum HOM05D001921 ORTHO05D001784 2.2e-09 66.6 150 36.0
Lj6g0019201 Lotus japonicus HOM05D001921 ORTHO05D001784 2.2e-09 66.6 141 35.5
ClCG11G003650 Citrullus lanatus HOM05D001921 ORTHO05D001784 3.8e-09 65.9 157 34.4
FAN28G2602 Fragaria x ananassa HOM05D001921 ORTHO05D001784 3.8e-09 65.9 167 35.3
Dinv03420 Davidia involucrata HOM05D001921 ORTHO05D001784 6.5e-09 65.1 173 34.7
TPR.G15777 Trifolium pratense HOM05D001921 ORTHO05D001784 8.5e-09 64.7 125 40.8
Dinv03521 Davidia involucrata HOM05D001921 ORTHO05D001784 1.1e-08 64.3 168 34.5
MD02G1012300 Malus domestica HOM05D001921 ORTHO05D001784 1.1e-08 64.3 159 37.7
Duzib187G0974 Durio zibethinus HOM05D001921 ORTHO05D001784 1.4e-08 63.9 172 30.8
Medtr4g116830 Medicago truncatula HOM05D001921 ORTHO05D001784 1.4e-08 63.9 124 41.9
Atru.chr7.2506 Acer truncatum HOM05D001921 ORTHO05D001784 1.9e-08 63.5 125 36.0
MELO3C004451.2 Cucumis melo HOM05D001921 ORTHO05D001784 2.5e-08 63.2 179 35.2
CANSAT11G0699 Cannabis sativa HOM05D001921 ORTHO05D001784 4.2e-08 62.4 158 39.2
Hma1.2p1_2976F.1_g331170 Hydrangea macrophylla HOM05D001921 ORTHO05D001784 5.5e-08 62.0 147 34.7
Lsat_1_v5_gn_6_115320 Lactuca sativa HOM05D001921 ORTHO05D001784 9.4e-08 61.2 194 31.4
VMungo1215G2840 Vigna mungo HOM05D001921 ORTHO05D001784 9.4e-08 61.2 161 34.8
Glyma.13G156700 Glycine max HOM05D001921 ORTHO05D001784 1.2e-07 60.8 161 34.2
Hma1.2p1_0028F.1_g017215 Hydrangea macrophylla HOM05D001921 ORTHO05D001784 1.2e-07 60.8 147 34.7
Gohir.D06G102300 Gossypium hirsutum HOM05D001921 ORTHO05D001784 1.6e-07 60.5 124 35.5
Medtr2g461300 Medicago truncatula HOM05D001921 ORTHO05D001784 1.6e-07 60.5 129 38.0
BcaB01g02407 Brassica carinata HOM05D001921 ORTHO05D001784 2.1e-07 60.1 164 33.5
BcaB01g02410 Brassica carinata HOM05D001921 ORTHO05D001784 2.1e-07 60.1 164 33.5
Glyma.17G104300 Glycine max HOM05D001921 ORTHO05D001784 2.1e-07 60.1 119 38.7
PGR102G2943 Punica granatum HOM05D001921 ORTHO05D001784 2.1e-07 60.1 139 38.1
Psat1g022640 Pisum sativum HOM05D001921 ORTHO05D001784 2.7e-07 59.7 170 34.7
TWI32G1277 Tripterygium wilfordii HOM05D001921 ORTHO05D001784 2.7e-07 59.7 150 34.0
Manes.16G126400 Manihot esculenta HOM05D001921 ORTHO05D001784 3.6e-07 59.3 177 35.0
Phvul.003G175500 Phaseolus vulgaris HOM05D001921 ORTHO05D001784 3.6e-07 59.3 117 38.5
BraA03t12309Z Brassica rapa HOM05D001921 ORTHO05D001784 4.6e-07 58.9 168 33.3
CsaV3_2G003470 Cucumis sativus L. HOM05D001921 ORTHO05D001784 4.6e-07 58.9 171 33.3
Ca_03892_v3 Cicer arietinum L. HOM05D001921 ORTHO05D001784 6.1e-07 58.5 134 35.8
Potri.018G022400 Populus trichocarpa HOM05D001921 ORTHO05D001784 6.1e-07 58.5 127 34.6
Ca_21607_v3 Cicer arietinum L. HOM05D001921 ORTHO05D001784 7.9e-07 58.2 125 37.6
Gorai.010G117300 Gossypium raimondii HOM05D001921 ORTHO05D001784 7.9e-07 58.2 125 36.0
CiPaw.16G117000 Carya illinoinensis HOM05D001921 ORTHO05D001784 1.0e-06 57.8 167 32.9
Sabra18G0025100 Salix brachista HOM05D001921 ORTHO05D001784 1.0e-06 57.8 128 33.6
Lj4g0015946 Lotus japonicus HOM05D001921 ORTHO05D001784 1.4e-06 57.4 122 38.5
Nn2g12262 Nelumbo nucifera HOM05D001921 ORTHO05D001784 1.4e-06 57.4 168 33.3
A03p31290 Brassica napus HOM05D001921 ORTHO05D001784 2.3e-06 56.6 164 33.5
Gohir.A06G100200 Gossypium hirsutum HOM05D001921 ORTHO05D001784 2.3e-06 56.6 125 35.2
Aa31sc859G10 Aethionema arabicum HOM05D001921 ORTHO05D001784 3.9e-06 55.8 127 31.5
Potri.006G260000 Populus trichocarpa HOM05D001921 ORTHO05D001784 3.9e-06 55.8 132 34.1
Duzib168G1630 Durio zibethinus HOM05D001921 ORTHO05D001784 5.1e-06 55.5 172 33.1
Cpa.g.sc16.79 Carica papaya HOM05D001921 ORTHO05D001784 6.7e-06 55.1 166 31.9
Eucgr.C04063 Eucalyptus grandis HOM05D001921 ORTHO05D001784 6.7e-06 55.1 125 38.4
Carub.0007s0853 Capsella rubella HOM05D001921 ORTHO05D001784 8.8e-06 54.7 55 49.1
Psat4g034000 Pisum sativum HOM05D001921 ORTHO05D001784 8.8e-06 54.7 125 42.4
THA.LOC104803850 Tarenaya hassleriana HOM05D001921 ORTHO05D001784 8.8e-06 54.7 119 31.9
TAR383G0606 Trochodendron aralioides HOM05D001921 ORTHO05D001784 8.8e-06 54.7 170 31.8


User provided reference genes

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