Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
THA.LOC104821808 Tarenaya hassleriana HOM05D006846 ORTHO05D008473 2.2e-76 288.9 148 100.0
Sp3g23740 Schrenkiella parvula HOM05D006846 ORTHO05D008473 5.2e-57 224.6 143 76.9
AL1G54740 Arabidopsis lyrata HOM05D006846 ORTHO05D008473 2.8e-55 218.8 151 75.5
AT1G48170 Arabidopsis thaliana HOM05D006846 ORTHO05D008473 3.7e-55 218.4 153 74.5
Thhalv10012405m.g Eutrema salsugineum HOM05D006846 ORTHO05D008473 3.7e-55 218.4 153 75.2
Aa31LG10G5560 Aethionema arabicum HOM05D006846 ORTHO05D008473 2.0e-53 212.6 149 73.8
A06p04640 Brassica napus HOM05D006846 ORTHO05D008473 2.0e-53 212.6 149 74.5
BraA06t23668Z Brassica rapa HOM05D006846 ORTHO05D008473 2.0e-53 212.6 149 74.5
BcaB07g33786 Brassica carinata HOM05D006846 ORTHO05D008473 4.5e-53 211.5 153 72.5
Carub.0001s3726 Capsella rubella HOM05D003832 ORTHO05D004365 4.5e-53 211.5 148 73.6
Carub.0005s0005 Capsella rubella HOM05D006846 ORTHO05D008473 4.5e-53 211.5 153 71.9
CARHR037810 Cardamine hirsuta HOM05D006846 ORTHO05D008473 4.5e-53 211.5 152 73.7
BolC6t35393H Brassica oleracea HOM05D006846 ORTHO05D008473 1.0e-52 210.3 149 73.2
BcaC08g43012 Brassica carinata HOM05D006846 ORTHO05D008473 1.3e-52 209.9 149 73.8
C06p02670 Brassica napus HOM05D006846 ORTHO05D008473 1.3e-52 209.9 149 73.8
CARHR290870 Cardamine hirsuta HOM05D006846 ORTHO05D008473 5.7e-48 194.5 118 81.4
Nitab4.5_0007474g0050 Nicotiana tabacum HOM05D006846 ORTHO05D008473 1.1e-46 190.3 137 67.9
Nitab4.5_0007368g0030 Nicotiana tabacum HOM05D006846 ORTHO05D008473 9.1e-46 187.2 120 74.2
GSVIVG01017604001 Vitis vinifera HOM05D006846 ORTHO05D008473 1.6e-45 186.4 134 70.9
GSVIVG01017661001 Vitis vinifera HOM05D006846 ORTHO05D008473 1.6e-45 186.4 134 70.9
Duzib212G0339 Durio zibethinus HOM05D006846 ORTHO05D008473 5.9e-45 184.5 116 75.9
PGR004G1594 Punica granatum HOM05D006846 ORTHO05D008473 5.9e-45 184.5 138 64.5
PGR033G0007 Punica granatum HOM05D006846 ORTHO05D008473 5.9e-45 184.5 138 64.5
Lj6A699T67 Lonicera japonica HOM05D006846 ORTHO05D008473 7.7e-45 184.1 119 73.1
QL06p041421 Quercus lobata HOM05D006846 ORTHO05D008473 1.7e-44 183.0 144 63.2
Migut.H02019 Erythranthe guttata HOM05D006846 ORTHO05D008473 2.3e-44 182.6 114 73.7
Peaxi162Scf00579g00010 Petunia axillaris HOM05D006846 ORTHO05D008473 3.8e-44 181.8 117 70.9
Thecc.04G310600 Theobroma cacao HOM05D006846 ORTHO05D008473 5.0e-44 181.4 141 65.2
Actinidia18502 Actinidia chinensis HOM05D006846 ORTHO05D008473 1.5e-43 179.9 112 75.9
MSTRG.14213 Avicennia marina HOM05D006846 ORTHO05D008473 1.5e-43 179.9 138 63.8
Hma1.2p1_0013F.1_g007970 Hydrangea macrophylla HOM05D006846 ORTHO05D008473 1.5e-43 179.9 116 74.1
Manes.03G210800 Manihot esculenta HOM05D006846 ORTHO05D008473 2.5e-43 179.1 114 74.6
SGA_v2.0_scaffold127G34033 Striga asiatica HOM05D006846 ORTHO05D008473 5.5e-43 177.9 137 64.2
Hund16859 Selenicereus undatus HOM05D006846 ORTHO05D008473 9.5e-43 177.2 124 67.7
CiPaw.01G161800 Carya illinoinensis HOM05D006846 ORTHO05D008473 1.2e-42 176.8 117 70.1
Sopen06g018550 Solanum pennellii HOM05D006846 ORTHO05D008473 1.6e-42 176.4 120 68.3
PGSC0003DMG400016299 Solanum tuberosum HOM05D006846 ORTHO05D008473 1.6e-42 176.4 143 59.4
Gohir.D09G242700 Gossypium hirsutum HOM05D006846 ORTHO05D008473 2.1e-42 176.0 138 66.7
Gorai.006G266400 Gossypium raimondii HOM05D006846 ORTHO05D008473 2.1e-42 176.0 138 66.7
PSO339G5299 Papaver somniferum HOM05D006846 ORTHO05D008473 2.1e-42 176.0 118 70.3
Solyc06g053470.3 Solanum lycopersicum HOM05D006846 ORTHO05D008473 2.1e-42 176.0 143 59.4
Ciclev10007018m.g Citrus clementina HOM05D006846 ORTHO05D008473 3.6e-42 175.3 117 70.1
Prupe.1G108100 Prunus persica HOM05D006846 ORTHO05D008473 4.7e-42 174.9 117 69.2
MELO3C003207.2 Cucumis melo HOM05D006846 ORTHO05D008473 6.1e-42 174.5 117 70.1
CsaV3_4G025810 Cucumis sativus L. HOM05D006846 ORTHO05D008473 1.0e-41 173.7 134 64.2
MD13G1143600 Malus domestica HOM05D006846 ORTHO05D008473 1.0e-41 173.7 118 70.3
Medtr2g046100 Medicago truncatula HOM05D006846 ORTHO05D008473 1.8e-41 172.9 134 62.7
Eucgr.H04110 Eucalyptus grandis HOM05D006846 ORTHO05D008473 3.0e-41 172.2 138 61.6
Potri.008G099700 Populus trichocarpa HOM05D006846 ORTHO05D008473 4.0e-41 171.8 114 71.9
Sed0003831 Sechium edule HOM05D006846 ORTHO05D008473 4.0e-41 171.8 139 61.9
Glyma.15G188800 Glycine max HOM05D006846 ORTHO05D008473 5.2e-41 171.4 113 73.5
Lj6g0016026 Lotus japonicus HOM05D006846 ORTHO05D008473 5.2e-41 171.4 115 69.6
Zm00001eb359370 Zea mays HOM05D006846 ORTHO05D008473 8.9e-41 170.6 115 69.6
CAN.G136.4 Capsicum annuum HOM05D006846 ORTHO05D008473 2.0e-40 169.5 132 59.8
Os12g0182800 Oryza sativa ssp. japonica HOM05D006846 ORTHO05D008473 3.4e-40 168.7 130 65.4
PSO384G1587 Papaver somniferum HOM05D006846 ORTHO05D008473 3.4e-40 168.7 118 66.9
Psat1g017720 Pisum sativum HOM05D006846 ORTHO05D008473 5.7e-40 167.9 137 59.9
VMungo1309G3101 Vigna mungo HOM05D006846 ORTHO05D008473 5.7e-40 167.9 113 72.6
CANSAT01G2167 Cannabis sativa HOM05D006846 ORTHO05D008473 9.8e-40 167.2 129 63.6
SGA_v2.0_scaffold64G22040 Striga asiatica HOM05D006846 ORTHO05D008473 1.3e-39 166.8 158 55.7
HanXRQChr09g0246471 Helianthus annuus HOM05D006846 ORTHO05D008473 1.7e-39 166.4 136 58.8
Aqoxy1G00358 Aquilegia oxysepala HOM05D006846 ORTHO05D008473 2.2e-39 166.0 118 70.3
Phvul.009G219800 Phaseolus vulgaris HOM05D006846 ORTHO05D008473 2.2e-39 166.0 113 69.9
RcHm_v2.0_Chr4g0426881 Rosa chinensis HOM05D006846 ORTHO05D008473 2.2e-39 166.0 118 67.8
Sabra08G0075400 Salix brachista HOM05D006846 ORTHO05D008473 2.2e-39 166.0 122 68.0
Cfa015953 Carpinus fangiana HOM05D006846 ORTHO05D008473 3.7e-39 165.2 117 70.9
Dinv29523 Davidia involucrata HOM05D006846 ORTHO05D008473 3.7e-39 165.2 97 79.4
CDE12G0609 Ceratophyllum demersum HOM05D006846 ORTHO05D008473 4.9e-39 164.9 141 59.6
FvH4_4g21260 Fragaria vesca HOM05D006846 ORTHO05D008473 4.9e-39 164.9 118 67.8
FAN07G1325 Fragaria x ananassa HOM05D006846 ORTHO05D008473 4.9e-39 164.9 118 67.8
Rhsim04G0247300 Rhododendron simsii HOM05D006846 ORTHO05D008473 6.3e-39 164.5 134 61.9
Sc23g0000700 Simmondsia chinensis HOM05D006846 ORTHO05D008473 6.3e-39 164.5 117 66.7
vmacro08003 Vaccinium macrocarpon HOM05D006846 ORTHO05D008473 6.3e-39 164.5 189 48.7
arahy.Tifrunner.gnm1.ann1.BIT0EB Arachis hypogaea HOM05D006846 ORTHO05D008473 8.3e-39 164.1 109 68.8
SGA_v2.0_scaffold127G34034 Striga asiatica HOM05D006846 ORTHO05D008473 8.3e-39 164.1 145 58.6
ECA233G5003 Erigeron canadensis HOM05D006846 ORTHO05D008473 1.1e-38 163.7 113 65.5
Lalb_Chr07g0181811 Lupinus albus HOM05D006846 ORTHO05D008473 1.1e-38 163.7 140 59.3
AUR62019042 Chenopodium quinoa HOM05D006846 ORTHO05D008473 4.1e-38 161.8 114 65.8
MBI11_g10320_MAGBIO Magnolia biondii HOM05D006846 ORTHO05D008473 5.4e-38 161.4 113 66.4
SEGI_09291 Sequoiadendron giganteum HOM05D006846 ORTHO05D008473 1.2e-37 160.2 113 64.6
Ca_02363_v3 Cicer arietinum L. HOM05D006846 ORTHO05D008473 2.0e-37 159.5 113 66.4
AUR62027881 Chenopodium quinoa HOM05D006846 ORTHO05D008473 4.5e-37 158.3 114 64.9
EL10Ac1g01060 Beta vulgaris HOM05D006846 ORTHO05D008473 1.1e-35 153.7 120 62.5
FAN12G0803 Fragaria x ananassa HOM05D006846 ORTHO05D008473 1.5e-35 153.3 143 56.6
SalBow8G5328 Salvia bowleyana HOM05D006846 ORTHO05D008473 1.5e-35 153.3 135 59.3
TWI73G0996 Tripterygium wilfordii HOM05D006846 ORTHO05D008473 1.9e-35 152.9 117 63.2
unitig_744.g24645 Utricularia gibba HOM05D006846 ORTHO05D008473 4.7e-34 148.3 117 61.5
COL.COLO4_34545 Corchorus olitorius HOM05D005582 ORTHO05D007028 5.2e-33 144.8 132 57.6
Haze_00535 Corylus avellana HOM05D006846 ORTHO05D008473 1.7e-31 139.8 117 64.1
Cc03_g00240 Coffea canephora HOM05D006846 ORTHO05D008473 4.9e-31 138.3 86 70.9
Haze_00536 Corylus avellana HOM05D006846 ORTHO05D008473 8.3e-31 137.5 117 63.2
TPR.G27493 Trifolium pratense HOM05D006846 ORTHO05D008473 1.4e-30 136.7 90 71.1
QL11p040346 Quercus lobata HOM05D006846 ORTHO05D008473 3.5e-29 132.1 143 53.1
Pp3c9_17660 Physcomitrium patens HOM05D006846 ORTHO05D008473 1.3e-28 130.2 115 53.9
Nn4g26496 Nelumbo nucifera HOM05D006846 ORTHO05D008473 1.7e-28 129.8 119 57.1
Dinv29521 Davidia involucrata HOM05D006846 ORTHO05D008473 2.3e-28 129.4 117 54.7
Mapoly0021s0070 Marchantia polymorpha HOM05D006846 ORTHO05D008473 6.6e-28 127.9 119 50.4
HPP92_004479 Vanilla planifolia HOM05D006846 ORTHO05D008473 8.6e-28 127.5 102 58.8
MD16G1146600 Malus domestica HOM05D006846 ORTHO05D008473 1.5e-27 126.7 117 53.8
Gohir.A09G242000 Gossypium hirsutum HOM05D006846 ORTHO05D008473 3.6e-26 122.1 138 52.9
MBI18_g09611_MAGBIO Magnolia biondii HOM05D006846 ORTHO05D008473 3.4e-24 115.5 96 57.3
TAR365G0638 Trochodendron aralioides HOM05D006846 ORTHO05D008473 1.7e-23 113.2 74 70.3
CSS0050245 Camellia sinensis var. sinensis HOM05D006846 ORTHO05D008473 2.2e-23 112.8 93 61.3
Lsat_1_v5_gn_6_71441 Lactuca sativa HOM05D006846 ORTHO05D008473 1.4e-22 110.2 113 49.6
arahy.Tifrunner.gnm1.ann1.EYUN0W Arachis hypogaea HOM05D000385 ORTHO05D000269 7.0e-22 107.8 138 42.8
Glyma.09G078800 Glycine max HOM05D006846 ORTHO05D008473 6.6e-20 101.3 62 80.6
ATR0693G432 Amborella trichopoda HOM05D006846 ORTHO05D008473 4.3e-19 98.6 73 60.3
CSS0047848 Camellia sinensis var. sinensis HOM05D006846 ORTHO05D008473 6.2e-18 94.7 53 86.8
ClCG04G007450 Citrullus lanatus HOM05D006846 ORTHO05D008473 8.9e-17 90.9 67 65.7
Cpa.g.sc146.38 Carica papaya HOM05D006846 ORTHO05D008473 1.1e-14 84.0 48 77.1
Hma1.2p1_0013F.1_g007960 Hydrangea macrophylla HOM05D006846 ORTHO05D008473 1.3e-12 77.0 52 65.4
Zm00001eb158200 Zea mays HOM05D006846 ORTHO05D008473 7.3e-11 71.2 48 62.5
Cre04.g216300 Chlamydomonas reinhardtii HOM05D006846 ORTHO05D008473 1.6e-10 70.1 102 36.3
MBI19_g16347_MAGBIO Magnolia biondii HOM05D006846 ORTHO05D008473 2.1e-10 69.7 94 42.6
AagrBONN_evm.TU.Sc2ySwM_117.777 Anthoceros agrestis HOM05D006846 ORTHO05D008473 1.1e-09 67.4 72 45.8
Dinv18032 Davidia involucrata HOM05D006846 ORTHO05D008473 2.2e-07 59.7 79 49.4
Thecc.01G162200 Theobroma cacao HOM05D006846 ORTHO05D008473 6.4e-07 58.2 63 54.0


User provided reference genes

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