Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
THA.LOC104820908 Tarenaya hassleriana HOM05D006714 ORTHO05D008103 0.0e+00 1352.0 743 100.0
Sp6g27560 Schrenkiella parvula HOM05D006714 ORTHO05D008103 2.1e-167 593.6 726 49.0
CARHR196610 Cardamine hirsuta HOM05D006714 ORTHO05D008103 1.7e-164 583.9 752 48.1
Carub.0006s1481 Capsella rubella HOM05D006714 ORTHO05D008103 7.8e-162 575.1 731 48.4
AL6G27570 Arabidopsis lyrata HOM05D006714 ORTHO05D008103 1.2e-157 561.2 735 47.6
Thhalv10012945m.g Eutrema salsugineum HOM05D006714 ORTHO05D008103 1.2e-157 561.2 752 46.9
AT5G16610 Arabidopsis thaliana HOM05D006714 ORTHO05D008103 5.8e-157 558.9 738 46.9
BraA10t44322Z Brassica rapa HOM05D006714 ORTHO05D008103 2.3e-153 547.0 750 46.3
BolC9t58884H Brassica oleracea HOM05D006714 ORTHO05D008103 6.4e-148 528.9 747 45.0
A10p22600 Brassica napus HOM05D006714 ORTHO05D008103 1.1e-147 528.1 746 45.0
C09p60510 Brassica napus HOM05D006714 ORTHO05D008103 1.4e-147 527.7 747 44.7
Aa31LG11G13040 Aethionema arabicum HOM05D006714 ORTHO05D008103 4.6e-146 522.7 746 45.7
BcaB08g36834 Brassica carinata HOM05D006714 ORTHO05D008103 4.8e-143 512.7 755 45.3
Ciclev10011142m.g Citrus clementina HOM05D006714 ORTHO05D008103 3.2e-115 420.2 790 36.8
Thecc.04G114100 Theobroma cacao HOM05D006714 ORTHO05D008103 3.3e-112 410.2 592 46.3
GSVIVG01030704001 Vitis vinifera HOM05D006714 ORTHO05D008103 3.3e-112 410.2 574 43.6
Sabra17G0108600 Salix brachista HOM05D006714 ORTHO05D008103 1.4e-110 404.8 326 61.3
Dinv28198 Davidia involucrata HOM05D006714 ORTHO05D008103 3.1e-110 403.7 332 61.7
MD15G1138100 Malus domestica HOM05D006714 ORTHO05D008103 3.1e-110 403.7 328 60.1
SalBow5G2523 Salvia bowleyana HOM05D006714 ORTHO05D008103 6.9e-110 402.5 355 58.0
Potri.017G130400 Populus trichocarpa HOM05D006714 ORTHO05D008103 1.2e-109 401.7 351 57.3
Hma1.2p1_0158F.1_g070140 Hydrangea macrophylla HOM05D006714 ORTHO05D008103 3.4e-109 400.2 349 60.5
RcHm_v2.0_Chr2g0123431 Rosa chinensis HOM05D006714 ORTHO05D008103 4.5e-109 399.8 780 37.1
Migut.K00904 Erythranthe guttata HOM05D006714 ORTHO05D008103 1.0e-108 398.7 325 61.2
TWI74G0031 Tripterygium wilfordii HOM05D006714 ORTHO05D008103 1.7e-108 397.9 334 59.6
Rhsim08G0018800 Rhododendron simsii HOM05D006714 ORTHO05D008103 3.8e-108 396.7 331 61.3
FAN19G0408 Fragaria x ananassa HOM05D005230 ORTHO05D006506 5.0e-108 396.4 332 61.1
Duzib211G0559 Durio zibethinus HOM05D006714 ORTHO05D008103 6.5e-108 396.0 598 46.2
Hund13103 Selenicereus undatus HOM05D006714 ORTHO05D008103 6.5e-108 396.0 336 59.5
Cfa007804 Carpinus fangiana HOM05D006714 ORTHO05D008103 8.5e-108 395.6 575 42.4
Nitab4.5_0000201g0160 Nicotiana tabacum HOM05D006714 ORTHO05D008103 1.1e-107 395.2 340 59.7
Manes.02G077300 Manihot esculenta HOM05D006714 ORTHO05D008103 1.4e-107 394.8 350 58.6
FvH4_1g25400 Fragaria vesca HOM05D006714 ORTHO05D008103 1.9e-107 394.4 329 61.4
Haze_14269 Corylus avellana HOM05D006714 ORTHO05D008103 4.2e-107 393.3 329 60.5
Gohir.D07G184700 Gossypium hirsutum HOM05D006714 ORTHO05D008103 7.2e-107 392.5 591 45.0
Cpa.g.sc116.59 Carica papaya HOM05D006714 ORTHO05D008103 9.4e-107 392.1 387 53.2
Gohir.A07G178400 Gossypium hirsutum HOM05D006714 ORTHO05D008103 9.4e-107 392.1 594 45.5
TAR629G3521 Trochodendron aralioides HOM05D006714 ORTHO05D008103 1.6e-106 391.3 344 58.7
Gorai.001G205100 Gossypium raimondii HOM05D006714 ORTHO05D008103 2.1e-106 391.0 614 43.6
Cc07_g13380 Coffea canephora HOM05D006714 ORTHO05D008103 4.7e-106 389.8 339 58.7
CiPaw.03G072500 Carya illinoinensis HOM05D006714 ORTHO05D008103 6.1e-106 389.4 327 57.8
arahy.Tifrunner.gnm1.ann1.ZV72ZC Arachis hypogaea HOM05D006714 ORTHO05D008103 3.0e-105 387.1 721 37.3
Nn4g24295 Nelumbo nucifera HOM05D006714 ORTHO05D008103 5.2e-105 386.3 335 60.6
arahy.Tifrunner.gnm1.ann1.E1Z4YV Arachis hypogaea HOM05D006714 ORTHO05D008103 6.7e-105 386.0 332 59.0
Oeu032319.1 Olea europaea HOM05D006714 ORTHO05D008103 8.8e-105 385.6 262 69.8
VMungo0647G1195 Vigna mungo HOM05D006714 ORTHO05D008103 8.8e-105 385.6 334 59.9
FAN26G1526 Fragaria x ananassa HOM05D006714 ORTHO05D008103 1.1e-104 385.2 347 58.2
TWI77G0889 Tripterygium wilfordii HOM05D006714 ORTHO05D008103 1.5e-104 384.8 710 37.7
FAN23G2031 Fragaria x ananassa HOM05D006714 ORTHO05D008103 2.6e-104 384.0 353 57.5
CAN.G222.36 Capsicum annuum HOM05D006714 ORTHO05D008103 1.7e-103 381.3 387 52.5
CsaV3_5G024210 Cucumis sativus L. HOM05D006714 ORTHO05D008103 2.2e-103 380.9 325 60.0
SGA_v2.0_scaffold45G17176 Striga asiatica HOM05D006714 ORTHO05D008103 6.3e-103 379.4 347 57.1
QL10p014398 Quercus lobata HOM05D006714 ORTHO05D008103 3.1e-102 377.1 343 54.8
LjContig00141g0000721 Lotus japonicus HOM05D006714 ORTHO05D008103 7.0e-102 375.9 558 40.9
CANSAT78G1609 Cannabis sativa HOM05D006714 ORTHO05D008103 9.1e-102 375.6 330 57.6
HanXRQChr15g0483231 Helianthus annuus HOM05D006714 ORTHO05D008103 9.1e-102 375.6 324 60.2
Sed0011157 Sechium edule HOM05D006714 ORTHO05D008103 1.2e-101 375.2 321 58.6
AUR62018218 Chenopodium quinoa HOM05D006714 ORTHO05D008103 2.6e-101 374.0 303 61.7
QL02p058308 Quercus lobata HOM05D006714 ORTHO05D008103 2.6e-101 374.0 343 54.5
EL10Ac2g03178 Beta vulgaris HOM05D006714 ORTHO05D008103 5.9e-101 372.9 305 61.6
DCAR_014171 Daucus carota HOM05D006714 ORTHO05D008103 5.9e-101 372.9 321 59.5
Medtr5g078170 Medicago truncatula HOM05D006714 ORTHO05D008103 1.3e-100 371.7 334 56.6
AUR62037796 Chenopodium quinoa HOM05D006714 ORTHO05D008103 3.8e-100 370.2 304 60.9
ECA247G1081 Erigeron canadensis HOM05D006714 ORTHO05D008103 5.0e-100 369.8 363 53.7
PSO017G5883 Papaver somniferum HOM05D006714 ORTHO05D008103 1.5e-99 368.2 345 55.9
ClCG01G008770 Citrullus lanatus HOM05D006714 ORTHO05D008103 9.4e-99 365.5 326 58.0
vmacro18531 Vaccinium macrocarpon HOM05D006714 ORTHO05D008103 1.2e-98 365.2 396 51.3
Ca_05830_v3 Cicer arietinum L. HOM05D006714 ORTHO05D008103 2.1e-98 364.4 332 56.6
Lalb_Chr04g0251401 Lupinus albus HOM05D006714 ORTHO05D008103 2.3e-97 360.9 359 55.7
Sopen11g005830 Solanum pennellii HOM05D006714 ORTHO05D008103 2.6e-96 357.5 378 51.3
Solyc11g011060.3 Solanum lycopersicum HOM05D006714 ORTHO05D008103 3.3e-96 357.1 357 52.9
Aqoxy1G00382 Aquilegia oxysepala HOM05D006714 ORTHO05D008103 1.7e-95 354.8 345 55.1
Nitab4.5_0006893g0050 Nicotiana tabacum HOM05D006714 ORTHO05D008103 4.8e-95 353.2 364 52.7
Lsat_1_v5_gn_3_63641 Lactuca sativa HOM05D006714 ORTHO05D008103 6.3e-95 352.8 367 52.9
PGR031G2162 Punica granatum HOM05D006714 ORTHO05D008103 5.3e-94 349.7 347 54.8
TPR.G8266 Trifolium pratense HOM05D006714 ORTHO05D008103 1.0e-89 335.5 589 37.5
HPP92_011112 Vanilla planifolia HOM05D006714 ORTHO05D008103 7.5e-88 329.3 320 53.1
HPP92_011097 Vanilla planifolia HOM05D006714 ORTHO05D008103 7.7e-85 319.3 320 51.9
ATR0171G009 Amborella trichopoda HOM05D006714 ORTHO05D008103 2.5e-83 314.3 382 46.3
Prupe.4G281200 Prunus persica HOM05D006714 ORTHO05D008103 6.1e-82 309.7 250 61.2
SHI30108 Sapria himalayana HOM05D006714 ORTHO05D008103 1.2e-80 305.4 293 54.6
Dinv19038 Davidia involucrata HOM05D006714 ORTHO05D008103 2.6e-80 304.3 665 34.9
Atru.chr1.1942 Acer truncatum HOM05D006714 ORTHO05D008103 9.8e-80 302.4 200 70.5
CDE07G1834 Ceratophyllum demersum HOM05D006714 ORTHO05D008103 3.7e-79 300.4 315 49.8
Os03g0221300 Oryza sativa ssp. japonica HOM05D006714 ORTHO05D008103 1.4e-78 298.5 282 52.8
Peaxi162Scf00305g00412 Petunia axillaris HOM05D006714 ORTHO05D008103 1.4e-78 298.5 190 71.6
SalBow5G2948 Salvia bowleyana HOM05D006714 ORTHO05D008103 7.0e-78 296.2 344 48.3
unitig_748.g8636 Utricularia gibba HOM05D006714 ORTHO05D008103 2.3e-76 291.2 235 61.3
Sc11g0004560 Simmondsia chinensis HOM05D006714 ORTHO05D008103 1.1e-75 288.9 252 58.3
PSO063G0106 Papaver somniferum HOM05D006714 ORTHO05D008103 5.2e-73 280.0 217 61.8
Glyma.14G214400 Glycine max HOM05D006714 ORTHO05D008103 7.0e-70 269.6 255 55.3
PSO478G0421 Papaver somniferum HOM05D006714 ORTHO05D008103 3.5e-69 267.3 252 56.3
Actinidia28805 Actinidia chinensis HOM05D006714 ORTHO05D008103 8.6e-60 236.1 177 64.4
Pp3c23_20330 Physcomitrium patens HOM05D006714 ORTHO05D008103 1.7e-55 221.9 291 44.0
Pp3c24_16350 Physcomitrium patens HOM05D006714 ORTHO05D008103 3.7e-55 220.7 358 38.0
SEGI_28129 Sequoiadendron giganteum HOM05D006714 ORTHO05D008103 1.2e-53 215.7 286 44.1
CBR_g12792 Chara braunii HOM05D006714 ORTHO05D008103 1.0e-52 212.6 252 42.1
Actinidia35727 Actinidia chinensis HOM05D006714 ORTHO05D008103 1.5e-51 208.8 351 39.0
Psat2g047840 Pisum sativum HOM05D006714 ORTHO05D008103 1.2e-50 205.7 207 52.7
SMO340G0205 Selaginella moellendorffii HOM05D006714 ORTHO05D008103 7.6e-48 196.4 198 48.0
QL93p0100_0731 Quercus lobata HOM05D006714 ORTHO05D008103 3.2e-46 191.0 117 70.9
Eucgr.F02863 Eucalyptus grandis HOM05D006714 ORTHO05D008103 3.6e-42 177.6 119 67.2
Phvul.008G236600 Phaseolus vulgaris HOM05D006714 ORTHO05D008103 3.1e-41 174.5 192 51.0
MELO3C022869.2 Cucumis melo HOM05D006714 ORTHO05D008103 9.9e-32 142.9 325 33.5
Peaxi162Scf00305g00413 Petunia axillaris HOM05D006714 ORTHO05D008103 2.0e-24 118.6 139 51.1
CSS0024067 Camellia sinensis var. sinensis HOM05D006714 ORTHO05D008103 1.3e-23 115.9 140 51.4
CSS0036373 Camellia sinensis var. sinensis HOM05D006714 ORTHO05D008103 1.3e-23 115.9 140 51.4
QL93p0100_0723 Quercus lobata HOM05D006714 ORTHO05D008103 1.0e-20 106.3 122 48.4


User provided reference genes

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