Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
THA.LOC104813812 Tarenaya hassleriana HOM05D007079 ORTHO05D009006 8.2e-213 743.4 365 100.0
AT1G19690 Arabidopsis thaliana HOM05D007079 ORTHO05D009006 9.5e-145 517.3 351 71.2
AL1G32410 Arabidopsis lyrata HOM05D007079 ORTHO05D009006 9.8e-142 507.3 355 71.0
Sp1g17520 Schrenkiella parvula HOM05D007079 ORTHO05D009006 7.1e-140 501.1 354 69.5
Carub.0001s1923 Capsella rubella HOM05D007079 ORTHO05D009006 1.2e-139 500.4 354 68.9
A06p15810 Brassica napus HOM05D007079 ORTHO05D009006 3.5e-139 498.8 354 70.9
Aa31LG7G4270 Aethionema arabicum HOM05D007079 ORTHO05D009006 2.0e-134 483.0 355 67.3
Thhalv10008056m.g Eutrema salsugineum HOM05D007079 ORTHO05D009006 3.7e-133 478.8 356 67.4
BraA06t24691Z Brassica rapa HOM05D007079 ORTHO05D009006 4.1e-132 475.3 355 69.0
BolC5t30520H Brassica oleracea HOM05D007079 ORTHO05D009006 1.2e-131 473.8 345 69.0
C05p18130 Brassica napus HOM05D007079 ORTHO05D009006 1.7e-130 469.9 345 68.7
BcaB07g31982 Brassica carinata HOM05D007079 ORTHO05D009006 9.9e-126 454.1 300 73.3
CARHR020210 Cardamine hirsuta HOM05D007079 ORTHO05D009006 1.3e-117 427.2 277 75.5
Atru.chr13.409 Acer truncatum HOM05D007079 ORTHO05D009006 3.1e-111 406.0 350 57.4
Actinidia15361 Actinidia chinensis HOM05D007079 ORTHO05D009006 2.9e-109 399.4 325 60.0
CSS0042333 Camellia sinensis var. sinensis HOM05D007079 ORTHO05D009006 3.2e-108 396.0 360 57.2
Ciclev10003294m.g Citrus clementina HOM05D007079 ORTHO05D009006 3.2e-108 396.0 318 59.7
Duzib093G0231 Durio zibethinus HOM05D007079 ORTHO05D009006 5.4e-108 395.2 308 60.4
TWI56G1128 Tripterygium wilfordii HOM05D007079 ORTHO05D009006 2.7e-107 392.9 309 60.8
Thecc.08G033400 Theobroma cacao HOM05D007079 ORTHO05D009006 1.3e-106 390.6 310 61.0
QL02p009607 Quercus lobata HOM05D007079 ORTHO05D009006 1.8e-106 390.2 355 54.9
Sabra02G0025400 Salix brachista HOM05D007079 ORTHO05D009006 2.3e-106 389.8 348 55.7
COL.COLO4_26243 Corchorus olitorius HOM05D007079 ORTHO05D009006 3.9e-106 389.0 304 62.8
Sc02g0005670 Simmondsia chinensis HOM05D007079 ORTHO05D009006 5.1e-106 388.7 352 54.3
Hma1.2p1_0469F.1_g158910 Hydrangea macrophylla HOM05D007079 ORTHO05D009006 8.7e-106 387.9 303 60.7
Gorai.009G271700 Gossypium raimondii HOM05D007079 ORTHO05D009006 1.5e-105 387.1 305 60.3
PGR031G2472 Punica granatum HOM05D007079 ORTHO05D009006 2.5e-105 386.3 355 53.2
Cfa013875 Carpinus fangiana HOM05D007079 ORTHO05D009006 2.8e-104 382.9 299 60.5
PGSC0003DMG400010042 Solanum tuberosum HOM05D007079 ORTHO05D009006 6.2e-104 381.7 354 52.0
Haze_22555 Corylus avellana HOM05D007079 ORTHO05D009006 8.1e-104 381.3 366 53.3
Potri.002G031500 Populus trichocarpa HOM05D007079 ORTHO05D009006 1.4e-103 380.6 349 55.0
ClCG08G014740 Citrullus lanatus HOM05D007079 ORTHO05D009006 2.4e-103 379.8 314 59.6
CsaV3_2G029020 Cucumis sativus L. HOM05D007079 ORTHO05D009006 2.4e-103 379.8 314 58.9
Hund26893 Selenicereus undatus HOM05D007079 ORTHO05D009006 2.4e-103 379.8 299 58.9
MELO3C010968.2 Cucumis melo HOM05D007079 ORTHO05D009006 3.1e-103 379.4 307 59.6
Nn5g29708 Nelumbo nucifera HOM05D007079 ORTHO05D009006 3.1e-103 379.4 368 53.0
FvH4_2g39320 Fragaria vesca HOM05D007079 ORTHO05D009006 1.2e-102 377.5 315 57.1
Rhsim06G0028600 Rhododendron simsii HOM05D007079 ORTHO05D009006 1.5e-102 377.1 329 58.1
CiPaw.07G156900 Carya illinoinensis HOM05D007079 ORTHO05D009006 3.4e-102 375.9 359 54.6
HanXRQChr09g0264171 Helianthus annuus HOM05D007079 ORTHO05D009006 3.4e-102 375.9 312 58.3
Prupe.1G374300 Prunus persica HOM05D007079 ORTHO05D009006 7.6e-102 374.8 313 58.1
GSVIVG01009772001 Vitis vinifera HOM05D007079 ORTHO05D009006 1.0e-101 374.4 307 58.6
RcHm_v2.0_Chr6g0301681 Rosa chinensis HOM05D007079 ORTHO05D009006 3.8e-101 372.5 310 58.1
Sed0004812 Sechium edule HOM05D007079 ORTHO05D009006 3.8e-101 372.5 322 56.8
Glyma.17G253400 Glycine max HOM05D007079 ORTHO05D009006 6.5e-101 371.7 313 57.2
Lalb_Chr22g0354571 Lupinus albus HOM05D007079 ORTHO05D009006 6.5e-101 371.7 314 57.6
Solyc02g089890.4 Solanum lycopersicum HOM05D002466 ORTHO05D009006 6.5e-101 371.7 350 51.4
Lj5g0022889 Lotus japonicus HOM05D007079 ORTHO05D009006 2.5e-100 369.8 306 57.8
Sopen02g034590 Solanum pennellii HOM05D007079 ORTHO05D009006 4.2e-100 369.0 351 51.9
Phvul.001G011600 Phaseolus vulgaris HOM05D007079 ORTHO05D009006 1.6e-99 367.1 312 57.7
Migut.K00854 Erythranthe guttata HOM05D007079 ORTHO05D009006 4.6e-99 365.5 348 54.3
Lsat_1_v5_gn_2_87400 Lactuca sativa HOM05D007079 ORTHO05D009006 1.3e-98 364.0 299 56.9
MD08G1024600 Malus domestica HOM05D007079 ORTHO05D009006 1.3e-98 364.0 307 56.4
arahy.Tifrunner.gnm1.ann1.1TI5B0 Arachis hypogaea HOM05D007079 ORTHO05D009006 6.7e-98 361.7 308 60.7
Lj4A133T11 Lonicera japonica HOM05D007079 ORTHO05D009006 8.7e-98 361.3 298 58.7
TPR.G30477 Trifolium pratense HOM05D007079 ORTHO05D009006 1.1e-97 360.9 315 55.9
AUR62014482 Chenopodium quinoa HOM05D007079 ORTHO05D009006 2.5e-97 359.8 300 57.3
ECA238G0935 Erigeron canadensis HOM05D007079 ORTHO05D009006 3.3e-97 359.4 304 56.2
MBI16_g23831_MAGBIO Magnolia biondii HOM05D007079 ORTHO05D009006 3.3e-97 359.4 343 53.9
TAR376G0129 Trochodendron aralioides HOM05D007079 ORTHO05D009006 3.3e-97 359.4 336 53.6
MSTRG.15412 Avicennia marina HOM05D007079 ORTHO05D009006 5.7e-97 358.6 352 51.4
vmacro21681 Vaccinium macrocarpon HOM05D007079 ORTHO05D009006 9.6e-97 357.8 318 56.6
Ca_13380_v3 Cicer arietinum L. HOM05D007079 ORTHO05D009006 2.8e-96 356.3 307 57.7
CAN.G836.5 Capsicum annuum HOM05D007079 ORTHO05D009006 4.8e-96 355.5 300 55.0
VMungo0647G1101 Vigna mungo HOM05D007079 ORTHO05D009006 4.8e-96 355.5 324 54.0
Ca_30048_v3 Cicer arietinum L. HOM05D007079 ORTHO05D009006 2.6e-94 349.7 302 57.6
Medtr1g022940 Medicago truncatula HOM05D007079 ORTHO05D009006 4.5e-94 349.0 306 55.6
Aqoxy6G01196 Aquilegia oxysepala HOM05D007079 ORTHO05D009006 1.0e-93 347.8 304 57.2
Eucgr.F01861 Eucalyptus grandis HOM05D007079 ORTHO05D009006 1.0e-93 347.8 316 54.1
Cc07_g05190 Coffea canephora HOM05D007079 ORTHO05D009006 1.3e-93 347.4 310 55.8
Glyma.14G071200 Glycine max HOM05D007079 ORTHO05D009006 4.2e-92 342.4 303 55.4
FAN27G2216 Fragaria x ananassa HOM05D007079 ORTHO05D009006 1.6e-91 340.5 311 54.7
Psat6g009680 Pisum sativum HOM05D007079 ORTHO05D009006 1.6e-91 340.5 345 51.6
Ah.05g180850 Amaranthus hybridus HOM05D007079 ORTHO05D009006 2.1e-91 340.1 359 47.6
CANSAT78G0946 Cannabis sativa HOM05D007079 ORTHO05D009006 4.6e-91 339.0 279 58.1
Gohir.D05G259900 Gossypium hirsutum HOM05D007079 ORTHO05D009006 4.6e-91 339.0 266 59.4
Manes.05G155100 Manihot esculenta HOM05D007079 ORTHO05D009006 7.9e-91 338.2 280 60.4
Gohir.A05G258332 Gossypium hirsutum HOM05D007079 ORTHO05D009006 3.0e-90 336.3 266 58.6
Peaxi162Scf00535g00126 Petunia axillaris HOM05D007079 ORTHO05D009006 1.9e-89 333.6 314 52.9
Oeu032890.1 Olea europaea HOM05D007079 ORTHO05D009006 2.5e-89 333.2 328 51.2
PSO541G3287 Papaver somniferum HOM05D007079 ORTHO05D009006 2.4e-87 326.6 302 55.0
Dinv39455 Davidia involucrata HOM05D007079 ORTHO05D009006 6.9e-87 325.1 245 63.3
arahy.Tifrunner.gnm1.ann1.GTY6RX Arachis hypogaea HOM05D007079 ORTHO05D009006 2.6e-86 323.2 249 64.7
SGA_v2.0_scaffold34G13653 Striga asiatica HOM05D007079 ORTHO05D009006 2.9e-85 319.7 352 49.1
PSO675G2324 Papaver somniferum HOM05D007079 ORTHO05D009006 3.8e-85 319.3 302 54.0
FAN26G1347 Fragaria x ananassa HOM05D007079 ORTHO05D009006 3.2e-84 316.2 266 57.5
Cpa.g.sc2827.1 Carica papaya HOM05D007079 ORTHO05D009006 5.5e-84 315.5 246 61.0
ATR1158G010 Amborella trichopoda HOM05D007079 ORTHO05D009006 1.6e-83 313.9 294 54.1
FAN15G1571 Fragaria x ananassa HOM05D007079 ORTHO05D009006 2.7e-83 313.2 266 56.8
Nitab4.5_0002108g0010 Nicotiana tabacum HOM05D002466 ORTHO05D002668 3.6e-83 312.8 330 47.0
SalBow1G2109 Salvia bowleyana HOM05D007079 ORTHO05D009006 3.7e-80 302.8 306 50.0
EL10Ac1g00614 Beta vulgaris HOM05D007079 ORTHO05D009006 4.5e-78 295.8 401 41.1
CDE05G2112 Ceratophyllum demersum HOM05D007079 ORTHO05D009006 2.2e-77 293.5 317 47.6
Zm00001eb128420 Zea mays HOM05D007079 ORTHO05D009006 5.0e-77 292.4 306 47.4
arahy.Tifrunner.gnm1.ann1.6FY89R Arachis hypogaea HOM05D000259 ORTHO05D000155 3.7e-72 276.2 311 50.2
Nitab4.5_0005754g0040 Nicotiana tabacum HOM05D007079 ORTHO05D009006 1.0e-69 268.1 336 42.0
Hma1.2p1_0469F.1_g158920 Hydrangea macrophylla HOM05D007079 ORTHO05D009006 7.0e-63 245.4 190 61.6
Mapoly0043s0142 Marchantia polymorpha HOM05D007079 ORTHO05D009006 8.0e-59 231.9 307 40.4
Pp3c24_15610 Physcomitrium patens HOM05D007079 ORTHO05D009006 1.3e-56 224.6 347 38.3
AagrBONN_evm.TU.Sc2ySwM_344.2117 Anthoceros agrestis HOM05D007079 ORTHO05D009006 2.4e-55 220.3 306 40.8
DCAR_026263 Daucus carota HOM05D007079 ORTHO05D009006 5.9e-54 215.7 217 48.4
SMO266G0019 Selaginella moellendorffii HOM05D007079 ORTHO05D009006 1.9e-52 210.7 300 41.0
Cpa.g.sc140.8 Carica papaya HOM05D007079 ORTHO05D009006 3.7e-48 196.4 277 40.8
AUR62034519 Chenopodium quinoa HOM05D007079 ORTHO05D009006 2.7e-46 190.3 168 58.3
Cre14.g628500 Chlamydomonas reinhardtii HOM05D007079 ORTHO05D009006 1.9e-44 184.1 353 33.7
CBR_g1049 Chara braunii HOM05D007079 ORTHO05D009006 1.7e-37 161.0 395 31.1
MCO16G171 Micromonas commoda HOM05D007079 ORTHO05D009006 2.0e-30 137.5 226 38.1
PRCOL_00000559 Prasinoderma coloniale HOM05D007079 ORTHO05D009006 3.5e-30 136.7 327 31.8
SEGI_24775 Sequoiadendron giganteum HOM05D007079 ORTHO05D009006 3.3e-28 130.2 108 53.7
FAN20G1265 Fragaria x ananassa HOM05D007079 ORTHO05D009006 1.2e-25 121.7 130 46.9
Actinidia22515 Actinidia chinensis HOM05D007079 ORTHO05D009006 1.7e-24 117.9 172 38.4
Os01g0261500 Oryza sativa ssp. japonica HOM05D007079 ORTHO05D009006 1.9e-23 114.4 106 50.0
SEGI_21203 Sequoiadendron giganteum HOM05D007079 ORTHO05D009006 2.6e-17 94.0 124 41.1
CSS0043977 Camellia sinensis var. sinensis HOM05D007079 ORTHO05D043334 1.1e-15 88.6 64 60.9
COL.COLO4_19820 Corchorus olitorius HOM05D001041 ORTHO05D000846 2.4e-07 60.8 50 62.0


User provided reference genes

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