Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
THA.LOC104811704 Tarenaya hassleriana HOM05D003788 ORTHO05D004633 0.0e+00 1890.2 987 100.0
Thhalv10012573m.g Eutrema salsugineum HOM05D003788 ORTHO05D004633 4.2e-171 606.3 1078 46.0
Carub.0008s1656 Capsella rubella HOM05D003788 ORTHO05D004633 6.3e-167 592.4 1084 44.6
AL8G31870 Arabidopsis lyrata HOM05D003788 ORTHO05D004633 1.0e-164 585.1 1082 45.5
Thhalv10012702m.g Eutrema salsugineum HOM05D003788 ORTHO05D004633 1.1e-160 571.6 993 44.0
Sp6g18100 Schrenkiella parvula HOM05D003788 ORTHO05D004633 2.4e-158 563.9 988 42.9
Aa31LG3G12140 Aethionema arabicum HOM05D003788 ORTHO05D004633 3.1e-158 563.5 1075 44.4
AL8G31880 Arabidopsis lyrata HOM05D003788 ORTHO05D004633 2.6e-157 560.5 982 42.7
AT5G56240 Arabidopsis thaliana HOM05D003788 ORTHO05D004633 3.6e-154 550.1 1079 45.1
AT5G56250 Arabidopsis thaliana HOM05D003788 ORTHO05D004633 6.8e-153 545.8 994 42.5
AL191U10030 Arabidopsis lyrata HOM05D003788 ORTHO05D004633 1.4e-150 538.1 1080 44.0
Carub.0008s1657 Capsella rubella HOM05D003788 ORTHO05D004633 1.4e-150 538.1 988 42.9
CARHR269650 Cardamine hirsuta HOM05D003788 ORTHO05D004633 7.0e-142 509.2 979 42.8
Sp6g18090 Schrenkiella parvula HOM05D003788 ORTHO05D004633 7.7e-141 505.8 914 45.4
BraA10t43453Z Brassica rapa HOM05D003788 ORTHO05D004633 4.1e-134 483.4 1073 40.3
A10p13490 Brassica napus HOM05D003788 ORTHO05D004633 7.0e-134 482.6 1073 40.2
C09p47480 Brassica napus HOM05D003788 ORTHO05D004633 2.3e-132 477.6 1069 39.9
BolC9t57603H Brassica oleracea HOM05D003788 ORTHO05D004633 3.9e-132 476.9 1074 39.6
BcaC04g20117 Brassica carinata HOM05D003788 ORTHO05D004633 1.1e-131 475.3 1065 39.8
BcaB05g22252 Brassica carinata HOM05D003788 ORTHO05D004633 5.8e-128 463.0 933 39.8
CARHR269640 Cardamine hirsuta HOM05D003788 ORTHO05D004633 7.0e-126 456.1 1048 41.5
Thecc.07G001100 Theobroma cacao HOM05D003788 ORTHO05D004633 3.9e-124 450.3 1242 33.7
C03p15990 Brassica napus HOM05D003788 ORTHO05D004633 6.6e-124 449.5 1060 40.2
BcaC01g06409 Brassica carinata HOM05D003788 ORTHO05D004633 5.6e-123 446.4 1069 39.9
C02p15420 Brassica napus HOM05D003788 ORTHO05D004633 9.5e-123 445.7 1096 39.2
BolC2t07656H Brassica oleracea HOM05D003788 ORTHO05D004633 9.5e-123 445.7 1096 39.2
BcaB05g22251 Brassica carinata HOM05D003788 ORTHO05D004633 2.1e-122 444.5 1106 37.8
A02p09250 Brassica napus HOM05D003788 ORTHO05D004633 4.7e-122 443.4 952 38.2
BolC3t14027H Brassica oleracea HOM05D003788 ORTHO05D004633 8.0e-122 442.6 1066 38.2
BcaB01g04386 Brassica carinata HOM05D003788 ORTHO05D004633 7.5e-120 436.0 1038 39.9
BraA03t10668Z Brassica rapa HOM05D003788 ORTHO05D004633 3.5e-117 427.2 1110 39.3
Duzib213G0477 Durio zibethinus HOM05D003788 ORTHO05D004633 4.3e-115 420.2 1238 32.3
A03p13640 Brassica napus HOM05D003788 ORTHO05D004633 1.6e-114 418.3 1129 38.5
COL.COLO4_07793 Corchorus olitorius HOM05D003788 ORTHO05D004633 4.7e-114 416.8 1244 31.6
Gohir.A13G128300 Gossypium hirsutum HOM05D003788 ORTHO05D004633 9.9e-112 409.1 1234 32.3
Gorai.013G147700 Gossypium raimondii HOM05D003788 ORTHO05D004633 4.9e-111 406.8 1235 32.4
Ciclev10007254m.g Citrus clementina HOM05D003788 ORTHO05D004633 8.3e-111 406.0 1141 32.8
BcaC01g06410 Brassica carinata HOM05D003788 ORTHO05D004633 4.1e-110 403.7 959 36.7
Duzib268G1743 Durio zibethinus HOM05D003788 ORTHO05D004633 1.6e-109 401.7 1275 32.6
Gohir.D13G131700 Gossypium hirsutum HOM05D003788 ORTHO05D004633 6.0e-109 399.8 1236 32.0
C03p15980 Brassica napus HOM05D003788 ORTHO05D004633 7.8e-109 399.4 960 36.6
C02p15400 Brassica napus HOM05D003788 ORTHO05D004633 1.0e-108 399.1 976 36.7
A02p09290 Brassica napus HOM05D003788 ORTHO05D004633 3.0e-108 397.5 1079 37.3
BolC3t14026H Brassica oleracea HOM05D003788 ORTHO05D004633 3.9e-108 397.1 959 36.6
Manes.05G204500 Manihot esculenta HOM05D003788 ORTHO05D004633 3.9e-108 397.1 1250 30.9
BcaB01g04387 Brassica carinata HOM05D003788 ORTHO05D004633 1.5e-107 395.2 971 37.1
BraA02t05991Z Brassica rapa HOM05D003788 ORTHO05D004633 1.9e-107 394.8 1106 37.0
BolC2t07655H Brassica oleracea HOM05D003788 ORTHO05D004633 7.3e-107 392.9 941 36.8
A03p13630 Brassica napus HOM05D003788 ORTHO05D004633 2.6e-104 384.4 978 36.5
BcaC03g14236 Brassica carinata HOM05D003788 ORTHO05D004633 7.6e-104 382.9 912 39.8
Atru.chr2.3902 Acer truncatum HOM05D003788 ORTHO05D004633 1.7e-103 381.7 1250 31.5
BcaC03g14234 Brassica carinata HOM05D003788 ORTHO05D004633 2.2e-103 381.3 941 36.2
Potri.001G472400 Populus trichocarpa HOM05D003788 ORTHO05D004633 2.9e-103 380.9 1234 30.6
Cfa016964 Carpinus fangiana HOM05D003788 ORTHO05D004633 6.4e-103 379.8 1190 31.7
BraA03t10667Z Brassica rapa HOM05D003788 ORTHO05D004633 1.4e-102 378.6 982 36.7
Sabra16G0320700 Salix brachista HOM05D003788 ORTHO05D004633 3.2e-102 377.5 1298 30.0
Sabra11G0137700 Salix brachista HOM05D003788 ORTHO05D004633 5.1e-100 370.2 1235 31.7
Haze_09919 Corylus avellana HOM05D003788 ORTHO05D004633 1.1e-99 369.0 1135 31.7
Potri.011G169100 Populus trichocarpa HOM05D003788 ORTHO05D004633 2.5e-99 367.9 1274 31.0
Manes.01G007100 Manihot esculenta HOM05D003788 ORTHO05D004633 5.6e-99 366.7 1258 31.0
C09p47500 Brassica napus HOM05D003788 ORTHO05D004633 2.1e-98 364.8 737 38.7
Gohir.A08G026000 Gossypium hirsutum HOM05D003788 ORTHO05D004633 2.1e-98 364.8 1143 32.0
MD11G1046500 Malus domestica HOM05D003788 ORTHO05D004633 6.2e-98 363.2 1207 32.1
Gorai.004G034500 Gossypium raimondii HOM05D003788 ORTHO05D004633 3.1e-97 360.9 1155 31.9
Gohir.D08G036500 Gossypium hirsutum HOM05D003788 ORTHO05D004633 7.1e-94 349.7 1174 31.3
Prupe.6G035800 Prunus persica HOM05D003788 ORTHO05D004633 3.5e-93 347.4 1269 30.3
MD03G1043400 Malus domestica HOM05D003788 ORTHO05D004633 1.7e-92 345.1 1190 31.5
RcHm_v2.0_Chr5g0074531 Rosa chinensis HOM05D003788 ORTHO05D004633 4.3e-91 340.5 1244 30.1
Duzib170G0482 Durio zibethinus HOM05D003788 ORTHO05D004633 9.6e-91 339.3 1245 30.0
Dinv19640 Davidia involucrata HOM05D003788 ORTHO05D004633 2.8e-90 337.8 1250 30.4
TWI38G0822 Tripterygium wilfordii HOM05D003788 ORTHO05D004633 8.1e-90 336.3 1169 32.3
FAN11G0056 Fragaria x ananassa HOM05D003788 ORTHO05D004633 5.3e-89 333.6 1249 30.7
FvH4_3g41530 Fragaria vesca HOM05D003788 ORTHO05D004633 1.2e-88 332.4 1252 31.1
QL08p000460 Quercus lobata HOM05D003788 ORTHO05D004633 1.5e-88 332.0 1244 29.3
GSVIVG01014849001 Vitis vinifera HOM05D003788 ORTHO05D004633 2.6e-88 331.3 1061 32.1
CSS0022631 Camellia sinensis var. sinensis HOM05D003788 ORTHO05D004633 3.4e-88 330.9 1190 30.8
FAN25G3203 Fragaria x ananassa HOM05D003788 ORTHO05D004633 1.7e-87 328.6 1242 30.3
Rhsim06G0235500 Rhododendron simsii HOM05D003788 ORTHO05D004633 3.8e-87 327.4 1198 30.0
TWI39G0992 Tripterygium wilfordii HOM05D003788 ORTHO05D004633 2.4e-86 324.7 1181 31.5
FAN21G2445 Fragaria x ananassa HOM05D003788 ORTHO05D004633 3.5e-85 320.9 1236 30.3
CiPaw.11G210900 Carya illinoinensis HOM05D003788 ORTHO05D004633 4.6e-85 320.5 1279 29.5
Dinv40920 Davidia involucrata HOM05D003788 ORTHO05D004633 7.9e-85 319.7 1236 29.7
FAN16G1134 Fragaria x ananassa HOM05D003788 ORTHO05D004633 1.1e-83 315.8 1246 29.9
CSS0001498 Camellia sinensis var. sinensis HOM05D003788 ORTHO05D004633 1.3e-82 312.4 1093 31.8
CSS0046183 Camellia sinensis var. sinensis HOM05D003788 ORTHO05D004633 1.3e-82 312.4 1093 31.8
THA.LOC104822683 Tarenaya hassleriana HOM05D003788 ORTHO05D004633 1.7e-79 302.0 1048 32.6
THA.LOC104810306 Tarenaya hassleriana HOM05D003788 ORTHO05D004633 1.9e-78 298.5 1111 30.5
Eucgr.F01984 Eucalyptus grandis HOM05D003788 ORTHO05D004633 7.1e-78 296.6 1189 28.6
CANSAT11G0655 Cannabis sativa HOM05D003788 ORTHO05D004633 3.5e-77 294.3 1224 29.1
PGR031G1033 Punica granatum HOM05D003788 ORTHO05D004633 2.3e-76 291.6 1102 30.7
Lj1A901G37 Lonicera japonica HOM05D003788 ORTHO05D004633 2.1e-74 285.0 1051 30.8
CiPaw.12G143000 Carya illinoinensis HOM05D003788 ORTHO05D004633 3.7e-74 284.3 999 30.3
Solyc07g066200.4 Solanum lycopersicum HOM05D003788 ORTHO05D004633 1.1e-73 282.7 1173 31.0
vmacro11644 Vaccinium macrocarpon HOM05D003788 ORTHO05D004633 2.0e-72 278.5 1133 30.1
BcaC04g20115 Brassica carinata HOM05D003788 ORTHO05D004633 3.8e-71 274.2 660 36.4
Sopen07g034380 Solanum pennellii HOM05D003788 ORTHO05D004633 8.4e-71 273.1 1211 30.4
Actinidia31533 Actinidia chinensis HOM05D003788 ORTHO05D004633 1.1e-70 272.7 1149 29.4
PGSC0003DMG400022144 Solanum tuberosum HOM05D003788 ORTHO05D004633 3.5e-69 267.7 1206 30.3
Sed0023936 Sechium edule HOM05D003788 ORTHO05D004633 4.6e-69 267.3 1195 29.0
BolC9t57606H Brassica oleracea HOM05D003788 ORTHO05D004633 6.1e-69 266.9 615 37.4
TAR626G0610 Trochodendron aralioides HOM05D003788 ORTHO05D004633 7.9e-69 266.5 1222 28.9
TAR629G3040 Trochodendron aralioides HOM05D003788 ORTHO05D004633 7.9e-69 266.5 1286 28.4
Peaxi162Scf00232g00078 Petunia axillaris HOM05D003788 ORTHO05D004633 1.0e-68 266.2 1043 29.9
TWI14G1222 Tripterygium wilfordii HOM05D003788 ORTHO05D004633 2.2e-66 258.5 583 38.6
Sed0020897 Sechium edule HOM05D003788 ORTHO05D004633 1.4e-65 255.8 1143 29.0
TAR627G0146 Trochodendron aralioides HOM05D003788 ORTHO05D004633 3.4e-64 251.1 1269 27.9
ClCG10G003840 Citrullus lanatus HOM05D003788 ORTHO05D004633 4.5e-64 250.8 1230 27.8
CsaV3_3G003820 Cucumis sativus L. HOM05D003788 ORTHO05D004633 4.5e-64 250.8 1182 28.0
ClCG10G003960 Citrullus lanatus HOM05D003788 ORTHO05D004633 1.7e-63 248.8 1230 27.7
MELO3C014063.2 Cucumis melo HOM05D003788 ORTHO05D004633 1.7e-63 248.8 1199 28.1
Nitab4.5_0001732g0050 Nicotiana tabacum HOM05D003788 ORTHO05D004633 2.7e-61 241.5 1171 28.9
Nitab4.5_0000152g0020 Nicotiana tabacum HOM05D003788 ORTHO05D004633 7.9e-61 240.0 1154 28.8
ClCG00G001230 Citrullus lanatus HOM05D003788 ORTHO05D004633 3.0e-60 238.0 1220 27.1
Oeu015274.1 Olea europaea HOM05D003788 ORTHO05D004633 6.7e-60 236.9 1188 26.7
DCAR_013754 Daucus carota HOM05D003788 ORTHO05D004633 1.1e-59 236.1 1137 26.6
Oeu052883.2 Olea europaea HOM05D003788 ORTHO05D004633 2.0e-59 235.3 1229 26.3
A10p13510 Brassica napus HOM05D003788 ORTHO05D004633 1.1e-57 229.6 681 33.3
SalBow8G5584 Salvia bowleyana HOM05D003788 ORTHO05D004633 1.8e-57 228.8 1153 27.4
HanXRQChr03g0079411 Helianthus annuus HOM05D003788 ORTHO05D004633 6.9e-57 226.9 1009 28.8
Cpa.g.sc12.61 Carica papaya HOM05D003788 ORTHO05D004633 1.1e-54 219.5 566 36.6
MSTRG.7044 Avicennia marina HOM05D003788 ORTHO05D004633 9.4e-54 216.5 1154 26.3
PSO782G4685 Papaver somniferum HOM05D003788 ORTHO05D004633 9.4e-54 216.5 1161 26.4
Nn1g07620 Nelumbo nucifera HOM05D003788 ORTHO05D004633 2.1e-53 215.3 1001 29.4
Lj8C184G1 Lonicera japonica HOM05D003788 ORTHO05D004633 2.7e-53 214.9 1076 26.3
Cc05_g15760 Coffea canephora HOM05D003788 ORTHO05D004633 3.6e-53 214.5 654 31.2
Sc03g0011790 Simmondsia chinensis HOM05D003788 ORTHO05D004633 1.8e-52 212.2 1010 25.5
Lsat_1_v5_gn_7_115701 Lactuca sativa HOM05D003788 ORTHO05D004633 3.0e-52 211.5 987 28.3
Hma1.2p1_0321F.1_g124360 Hydrangea macrophylla HOM05D003788 ORTHO05D004633 2.0e-51 208.8 386 40.2
ECA236G3073 Erigeron canadensis HOM05D003788 ORTHO05D004633 7.0e-49 200.3 989 26.7
Ah.04g166650 Amaranthus hybridus HOM05D003788 ORTHO05D004633 3.2e-46 191.4 992 26.3
Migut.H01707 Erythranthe guttata HOM05D003788 ORTHO05D004633 4.2e-46 191.0 949 28.5
HanXRQChr11g0346921 Helianthus annuus HOM05D003788 ORTHO05D004633 9.4e-46 189.9 447 34.7
HanXRQChr17g0546861 Helianthus annuus HOM05D003788 ORTHO05D004633 9.4e-46 189.9 957 25.5
MSTRG.16130 Avicennia marina HOM05D003788 ORTHO05D004633 3.6e-45 188.0 1195 25.2
Migut.M01579 Erythranthe guttata HOM05D003788 ORTHO05D004633 4.7e-45 187.6 348 37.4
MBI14_g10253_MAGBIO Magnolia biondii HOM05D003788 ORTHO05D004633 1.0e-44 186.4 614 30.8
MBI15_g35998_MAGBIO Magnolia biondii HOM05D003788 ORTHO05D004633 1.0e-44 186.4 1108 27.3
unitig_0.g982 Utricularia gibba HOM05D003788 ORTHO05D004633 1.5e-43 182.6 1038 27.1
ECA240G4117 Erigeron canadensis HOM05D003788 ORTHO05D004633 6.3e-42 177.2 998 28.0
Zm00001eb424700 Zea mays HOM05D003788 ORTHO05D004633 8.2e-42 176.8 458 33.0
Zm00001eb079970 Zea mays HOM05D003788 ORTHO05D004633 1.4e-41 176.0 1108 26.4
Aqoxy4G02274 Aquilegia oxysepala HOM05D003788 ORTHO05D004633 1.8e-41 175.6 496 33.1
Os04g0471400 Oryza sativa ssp. japonica HOM05D003788 ORTHO05D004633 2.4e-41 175.3 1068 26.3
AUR62035659 Chenopodium quinoa HOM05D003788 ORTHO05D004633 1.2e-40 172.9 1109 26.5
SGA_v2.0_scaffold11G05962 Striga asiatica HOM05D003788 ORTHO05D004633 3.5e-40 171.4 778 27.5
CARHR218680 Cardamine hirsuta HOM05D003788 ORTHO05D004633 3.8e-39 167.9 199 50.8
HPP92_015789 Vanilla planifolia HOM05D003788 ORTHO05D004633 3.8e-39 167.9 464 34.1
BraA02t05990Z Brassica rapa HOM05D003788 ORTHO05D004633 5.0e-39 167.5 211 48.3
Actinidia30346 Actinidia chinensis HOM05D003788 ORTHO05D004633 1.5e-38 166.0 411 33.3
HPP92_022807 Vanilla planifolia HOM05D003788 ORTHO05D004633 1.2e-37 162.9 473 31.7
AUR62017148 Chenopodium quinoa HOM05D003788 ORTHO05D004633 2.3e-36 158.7 937 27.0
unitig_46.g18528 Utricularia gibba HOM05D003788 ORTHO05D004633 3.0e-36 158.3 987 25.2
CDE11G0275 Ceratophyllum demersum HOM05D003788 ORTHO05D004633 4.0e-36 157.9 450 33.6
ATR0751G208 Amborella trichopoda HOM05D003788 ORTHO05D004633 6.8e-36 157.1 527 30.6
EL10Ac4g07522 Beta vulgaris HOM05D003788 ORTHO05D004633 6.8e-36 157.1 905 26.6
MSTRG.13048 Avicennia marina HOM05D003788 ORTHO05D004633 2.6e-35 155.2 910 25.8
SGA_v2.0_scaffold7G03552 Striga asiatica HOM05D003788 ORTHO05D004633 4.4e-35 154.5 725 26.5
Lsat_1_v5_gn_9_88661 Lactuca sativa HOM05D003788 ORTHO05D004633 2.2e-34 152.1 887 27.1
Hund23029 Selenicereus undatus HOM05D003788 ORTHO05D004633 2.7e-32 145.2 1170 24.6
unitig_37.g12213 Utricularia gibba HOM05D003788 ORTHO05D004633 5.0e-31 141.0 980 24.2
Actinidia30347 Actinidia chinensis HOM05D003788 ORTHO05D004633 1.2e-29 136.3 337 34.7
Cc05_g15750 Coffea canephora HOM05D003788 ORTHO05D004633 1.7e-23 115.9 345 34.2
CDE06G0258 Ceratophyllum demersum HOM05D003788 ORTHO05D004633 2.1e-21 109.0 273 34.4
CDE05G2211 Ceratophyllum demersum HOM05D003788 ORTHO05D004633 5.9e-16 90.9 447 29.5
HPP92_007487 Vanilla planifolia HOM05D003788 ORTHO05D004633 4.3e-14 84.7 206 32.5
Nn1g09760 Nelumbo nucifera HOM05D003788 ORTHO05D010879 5.6e-14 84.3 239 28.9
TAR365G0164 Trochodendron aralioides HOM05D003788 ORTHO05D010879 8.0e-13 80.5 339 28.0
TAR365G1027 Trochodendron aralioides HOM05D010496 ORTHO05D010879 3.1e-12 78.6 250 29.6
Aqoxy2G04009 Aquilegia oxysepala HOM05D003788 ORTHO05D010879 4.0e-12 78.2 262 28.2
MBI14_g12743_MAGBIO Magnolia biondii HOM05D003788 ORTHO05D004633 3.4e-11 75.1 365 29.0
CiPaw.01G109800 Carya illinoinensis HOM05D010496 ORTHO05D010879 4.9e-10 71.2 231 28.6
Prupe.1G176100 Prunus persica HOM05D010496 ORTHO05D010879 4.6e-08 64.7 233 25.3
SEGI_04749 Sequoiadendron giganteum HOM05D003788 ORTHO05D004633 4.6e-08 64.7 69 49.3
CDE03G0063 Ceratophyllum demersum HOM05D003788 ORTHO05D004633 7.8e-08 63.9 50 56.0
MD04G1026500 Malus domestica HOM05D010496 ORTHO05D010879 1.3e-07 63.2 231 28.6
PSO017G0918 Papaver somniferum HOM05D061670 ORTHO05D010879 3.9e-07 61.6 51 52.9
PSO675G9246 Papaver somniferum HOM05D061670 ORTHO05D010879 3.9e-07 61.6 51 52.9
QL06p027780 Quercus lobata HOM05D010496 ORTHO05D010879 6.6e-07 60.8 268 26.5
Lalb_Chr06g0164061 Lupinus albus HOM05D011141 ORTHO05D010879 3.3e-06 58.5 55 52.7
TPR.G10391 Trifolium pratense HOM05D011141 ORTHO05D010879 4.3e-06 58.2 56 46.4
Lj2g0022590 Lotus japonicus HOM05D011141 ORTHO05D010879 7.3e-06 57.4 228 24.6
Phvul.007G007000 Phaseolus vulgaris HOM05D011141 ORTHO05D010879 7.3e-06 57.4 59 39.0


User provided reference genes

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