Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
THA.LOC104810177 Tarenaya hassleriana HOM05D002833 ORTHO05D003210 3.5e-75 285.0 162 100.0
THA.LOC109116961 Tarenaya hassleriana HOM05D002833 ORTHO05D003210 1.6e-51 206.5 139 79.9
THA.LOC109116033 Tarenaya hassleriana HOM05D002833 ORTHO05D003210 4.3e-41 171.8 114 77.2
THA.LOC109116533 Tarenaya hassleriana HOM05D002833 ORTHO05D003210 7.0e-31 137.9 146 62.3
AT5G48050 Arabidopsis thaliana HOM05D002833 ORTHO05D003210 6.5e-29 131.3 109 62.4
Sp6g08170 Schrenkiella parvula HOM05D002833 ORTHO05D003210 2.1e-27 126.3 120 58.3
AL8G20450 Arabidopsis lyrata HOM05D008458 ORTHO05D010628 3.6e-27 125.6 134 53.0
THA.LOC104810179 Tarenaya hassleriana HOM05D002833 ORTHO05D003210 8.0e-27 124.4 124 55.6
AT1G34070 Arabidopsis thaliana HOM05D002833 ORTHO05D003210 6.7e-26 121.3 113 53.1
Sp4g03150 Schrenkiella parvula HOM05D002833 ORTHO05D003210 1.6e-22 110.2 115 49.6
Sp3g30840 Schrenkiella parvula HOM05D002833 ORTHO05D003210 1.0e-21 107.5 104 51.9
AL431U10010 Arabidopsis lyrata HOM05D002833 ORTHO05D003210 1.5e-20 103.6 94 56.4
Thhalv10001107m.g Eutrema salsugineum HOM05D002833 ORTHO05D003210 2.7e-19 99.4 123 45.5
Lsat_1_v5_gn_2_116841 Lactuca sativa HOM05D002833 ORTHO05D003210 2.3e-18 96.3 131 39.7
AL6G51530 Arabidopsis lyrata HOM05D002833 ORTHO05D003210 2.6e-17 92.8 123 47.2
ECA246G2299 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.4e-17 92.4 107 38.3
Sp1g32450 Schrenkiella parvula HOM05D002833 ORTHO05D003210 4.8e-16 88.6 107 43.9
ECA236G4198 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.1e-15 85.9 132 34.1
THA.LOC104820447 Tarenaya hassleriana HOM05D002833 ORTHO05D003210 4.1e-15 85.5 70 65.7
Sp3g24750 Schrenkiella parvula HOM05D002833 ORTHO05D003210 7.7e-14 81.3 84 51.2
C04p35790 Brassica napus HOM05D002833 ORTHO05D003210 1.4e-10 70.5 80 52.5
BolC5t31076H Brassica oleracea HOM05D002833 ORTHO05D003210 3.0e-10 69.3 51 64.7
Sopen00g009240 Solanum pennellii HOM05D000002 ORTHO05D000001 3.0e-10 69.3 90 42.2
Sopen10g028380 Solanum pennellii HOM05D000002 ORTHO05D000001 3.0e-10 69.3 90 42.2
SpUn0139_0010 Schrenkiella parvula HOM05D002833 ORTHO05D003210 5.2e-10 68.6 122 39.3
ECA233G0728 Erigeron canadensis HOM05D002833 ORTHO05D003210 6.8e-10 68.2 116 37.1
BolC5t31072H Brassica oleracea HOM05D002833 ORTHO05D003210 1.2e-09 67.4 51 62.7
Ah.03g139420 Amaranthus hybridus HOM05D000002 ORTHO05D000001 4.4e-09 65.5 130 34.6
Lalb_Chr09g0335481 Lupinus albus HOM05D002833 ORTHO05D003210 4.4e-09 65.5 90 40.0
PSO170G4012 Papaver somniferum HOM05D002833 ORTHO05D003210 9.8e-09 64.3 139 39.6
Sopen11g021960 Solanum pennellii HOM05D002833 ORTHO05D003210 2.8e-08 62.8 130 33.8
Ah.14g080650 Amaranthus hybridus HOM05D002833 ORTHO05D003210 3.7e-08 62.4 119 31.9
ECA233G0427 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.3e-08 61.6 86 38.4
ECA246G0311 Erigeron canadensis HOM05D002833 ORTHO05D003210 6.3e-08 61.6 139 34.5
PSO384G0500 Papaver somniferum HOM05D002833 ORTHO05D003210 6.3e-08 61.6 131 35.9
Peaxi162Scf00019g00041 Petunia axillaris HOM05D002833 ORTHO05D000001 8.3e-08 61.2 102 33.3
ECA236G1804 Erigeron canadensis HOM05D000031 ORTHO05D000001 1.1e-07 60.8 141 34.0
HanXRQChr03g0061761 Helianthus annuus HOM05D002833 ORTHO05D003210 1.4e-07 60.5 102 33.3
HanXRQChr13g0410031 Helianthus annuus HOM05D002833 ORTHO05D003210 1.4e-07 60.5 111 33.3
PSO017G2940 Papaver somniferum HOM05D002833 ORTHO05D003210 1.8e-07 60.1 114 38.6
Sopen02g005450 Solanum pennellii HOM05D000002 ORTHO05D000001 1.8e-07 60.1 91 36.3
HanXRQChr09g0277371 Helianthus annuus HOM05D002833 ORTHO05D003210 2.4e-07 59.7 94 37.2
Nitab4.5_0005846g0030 Nicotiana tabacum HOM05D002833 ORTHO05D003210 2.4e-07 59.7 88 33.0
PSO675G9166 Papaver somniferum HOM05D002833 ORTHO05D003210 2.4e-07 59.7 131 35.1
PSO729G0150 Papaver somniferum HOM05D002833 ORTHO05D003210 2.4e-07 59.7 130 36.9
TPR.G40622 Trifolium pratense HOM05D002833 ORTHO05D003210 2.4e-07 59.7 92 35.9
ECA247G1426 Erigeron canadensis HOM05D002833 ORTHO05D003210 3.1e-07 59.3 118 32.2
Nitab4.5_0000871g0050 Nicotiana tabacum HOM05D002833 ORTHO05D003210 3.1e-07 59.3 128 33.6
Peaxi162Scf00031g00297 Petunia axillaris HOM05D010760 ORTHO05D003210 3.1e-07 59.3 133 30.8
Sp2g06940 Schrenkiella parvula HOM05D002833 ORTHO05D003210 3.1e-07 59.3 89 42.7
SpUn0014_0090 Schrenkiella parvula HOM05D002833 ORTHO05D003210 3.1e-07 59.3 89 42.7
Hma1.2p1_0020F.1_g014040 Hydrangea macrophylla HOM05D000002 ORTHO05D000001 4.1e-07 58.9 115 37.4
Peaxi162Scf00202g00046 Petunia axillaris HOM05D002833 ORTHO05D003210 4.1e-07 58.9 106 34.0
HanXRQChr07g0189441 Helianthus annuus HOM05D002833 ORTHO05D003210 5.4e-07 58.5 129 32.6
PSO210G3332 Papaver somniferum HOM05D002833 ORTHO05D003210 5.4e-07 58.5 131 37.4
Sopen06g002190 Solanum pennellii HOM05D002833 ORTHO05D019253 5.4e-07 58.5 82 37.8
PSO675G6366 Papaver somniferum HOM05D002833 ORTHO05D003210 7.0e-07 58.2 131 36.6
AUR62042214 Chenopodium quinoa HOM05D002833 ORTHO05D003210 9.2e-07 57.8 131 34.4
PSO675G0904 Papaver somniferum HOM05D002833 ORTHO05D003210 9.2e-07 57.8 117 38.5
Sopen10g012450 Solanum pennellii HOM05D000006 ORTHO05D000001 9.2e-07 57.8 103 34.0
AUR62037648 Chenopodium quinoa HOM05D002833 ORTHO05D003210 1.2e-06 57.4 135 32.6
Sopen01g021080 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-06 57.4 134 32.8
Sopen01g035850 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-06 57.4 134 32.8
Sopen02g003650 Solanum pennellii HOM05D002833 ORTHO05D003210 1.2e-06 57.4 134 32.8
Sopen02g020210 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-06 57.4 134 32.8
Sopen03g035230 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-06 57.4 134 32.8
Sopen04g026030 Solanum pennellii HOM05D000013 ORTHO05D000011 1.2e-06 57.4 134 32.8
Sopen06g001090 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-06 57.4 134 32.8
Sopen06g016120 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-06 57.4 134 32.8
Sopen06g023450 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-06 57.4 134 32.8
Sopen08g029170 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-06 57.4 134 32.8
Sopen09g028170 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-06 57.4 134 32.8
Sopen12g019720 Solanum pennellii HOM05D000002 ORTHO05D000001 1.2e-06 57.4 134 32.8
VMungo0464G1997 Vigna mungo HOM05D002833 ORTHO05D003210 1.2e-06 57.4 84 38.1
AUR62024857 Chenopodium quinoa HOM05D002833 ORTHO05D003210 1.6e-06 57.0 122 32.8
Solyc02g061920.2 Solanum lycopersicum HOM05D002833 ORTHO05D003210 2.0e-06 56.6 86 36.0
ECA233G3460 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.7e-06 56.2 146 32.2
Nitab4.5_0003362g0070 Nicotiana tabacum HOM05D002833 ORTHO05D000001 3.5e-06 55.8 107 32.7
Solyc11g016945.1 Solanum lycopersicum HOM05D002833 ORTHO05D003210 3.5e-06 55.8 128 32.8
EL10Ac1g02212 Beta vulgaris HOM05D002833 ORTHO05D003210 5.9e-06 55.1 111 32.4
HanXRQChr03g0093111 Helianthus annuus HOM05D000002 ORTHO05D000001 5.9e-06 55.1 119 32.8
Nitab4.5_0004147g0060 Nicotiana tabacum HOM05D002833 ORTHO05D000001 5.9e-06 55.1 95 30.5
Lalb_Chr13g0290791 Lupinus albus HOM05D002833 ORTHO05D003210 7.7e-06 54.7 113 33.6
PSO063G5794 Papaver somniferum HOM05D002833 ORTHO05D003210 7.7e-06 54.7 90 37.8
PSO210G4142 Papaver somniferum HOM05D002833 ORTHO05D003210 7.7e-06 54.7 117 34.2
PSO541G3398 Papaver somniferum HOM05D002833 ORTHO05D003210 7.7e-06 54.7 117 34.2


User provided reference genes

Program Settings