Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
THA.LOC104808393 Tarenaya hassleriana HOM05D007495 ORTHO05D009552 6.6e-93 344.0 167 100.0
THA.LOC104800583 Tarenaya hassleriana HOM05D007495 ORTHO05D009552 6.8e-82 307.4 166 90.4
AT2G28105 Arabidopsis thaliana HOM05D007495 ORTHO05D009552 3.8e-56 221.9 163 69.9
AL4G22050 Arabidopsis lyrata HOM05D007495 ORTHO05D009552 4.2e-55 218.4 163 68.7
Carub.0004s0888 Capsella rubella HOM05D007495 ORTHO05D009552 2.1e-54 216.1 163 68.7
BcaB01g03091 Brassica carinata HOM05D007495 ORTHO05D009552 6.0e-54 214.5 165 64.8
Thhalv10017338m.g Eutrema salsugineum HOM05D007495 ORTHO05D009552 6.0e-54 214.5 166 66.9
Sp4g10910 Schrenkiella parvula HOM05D007495 ORTHO05D009552 1.5e-52 209.9 158 66.5
CARHR120870 Cardamine hirsuta HOM05D007495 ORTHO05D009552 1.6e-51 206.5 158 65.2
A03p26400 Brassica napus HOM05D007495 ORTHO05D009552 3.1e-50 202.2 150 67.3
C03p31690 Brassica napus HOM05D007495 ORTHO05D009552 3.1e-50 202.2 150 67.3
BraA03t11855Z Brassica rapa HOM05D007495 ORTHO05D009552 3.1e-50 202.2 150 67.3
BcaC01g04959 Brassica carinata HOM05D007495 ORTHO05D009552 1.2e-49 200.3 150 66.7
BolC3t15512H Brassica oleracea HOM05D007495 ORTHO05D009552 1.2e-49 200.3 150 66.7
Prupe.6G109500 Prunus persica HOM05D007495 ORTHO05D009552 3.2e-39 165.6 159 54.1
CsaV3_6G014270 Cucumis sativus L. HOM05D007495 ORTHO05D009552 1.6e-38 163.3 163 49.7
ClCG02G021490 Citrullus lanatus HOM05D007495 ORTHO05D009552 2.1e-38 162.9 158 51.3
Ciclev10029419m.g Citrus clementina HOM05D007495 ORTHO05D009552 2.1e-38 162.9 162 53.7
GSVIVG01031491001 Vitis vinifera HOM05D007495 ORTHO05D009552 3.6e-38 162.2 154 56.5
Hma1.2p1_0051F.1_g029310 Hydrangea macrophylla HOM05D007495 ORTHO05D009552 4.6e-38 161.8 161 52.8
Manes.04G014200 Manihot esculenta HOM05D007495 ORTHO05D009552 6.1e-38 161.4 161 52.8
Atru.chr3.3537 Acer truncatum HOM05D007495 ORTHO05D009552 7.9e-38 161.0 158 52.5
QL01p015526 Quercus lobata HOM05D007495 ORTHO05D009552 1.0e-37 160.6 159 50.9
TAR633G0300 Trochodendron aralioides HOM05D007495 ORTHO05D009552 1.0e-37 160.6 159 52.2
MSTRG.17767 Avicennia marina HOM05D007495 ORTHO05D009552 1.4e-37 160.2 169 49.7
FAN25G1473 Fragaria x ananassa HOM05D007495 ORTHO05D009552 1.4e-37 160.2 166 48.8
Dinv34730 Davidia involucrata HOM05D007495 ORTHO05D009552 1.8e-37 159.8 161 52.8
Lalb_Chr24g0394861 Lupinus albus HOM05D007495 ORTHO05D009552 3.0e-37 159.1 155 52.3
RcHm_v2.0_Chr5g0057451 Rosa chinensis HOM05D007495 ORTHO05D009552 3.0e-37 159.1 166 48.8
CSS0017583 Camellia sinensis var. sinensis HOM05D007495 ORTHO05D009552 3.9e-37 158.7 163 50.9
MD11G1146400 Malus domestica HOM05D007495 ORTHO05D009552 3.9e-37 158.7 165 52.7
Haze_23728 Corylus avellana HOM05D007495 ORTHO05D009552 5.1e-37 158.3 159 54.1
FAN21G3793 Fragaria x ananassa HOM05D007495 ORTHO05D009552 5.1e-37 158.3 161 48.4
Aa31LG5G8040 Aethionema arabicum HOM05D002446 ORTHO05D002941 1.1e-36 157.1 139 59.7
Eucgr.B03939 Eucalyptus grandis HOM05D007495 ORTHO05D009552 1.1e-36 157.1 165 49.7
CiPaw.13G124600 Carya illinoinensis HOM05D007495 ORTHO05D009552 1.5e-36 156.8 161 51.6
Nn6g35262 Nelumbo nucifera HOM05D007495 ORTHO05D009552 1.5e-36 156.8 159 52.8
SGA_v2.0_scaffold436G51603 Striga asiatica HOM05D007495 ORTHO05D009552 1.9e-36 156.4 161 50.9
Cfa010302 Carpinus fangiana HOM05D007495 ORTHO05D009552 2.5e-36 156.0 159 52.8
MELO3C026944.2 Cucumis melo HOM05D007495 ORTHO05D009552 3.3e-36 155.6 158 50.0
Oeu018477.1 Olea europaea HOM05D007495 ORTHO05D009552 3.3e-36 155.6 160 54.4
Rhsim13G0099600 Rhododendron simsii HOM05D007495 ORTHO05D009552 3.3e-36 155.6 159 50.9
Sed0010722 Sechium edule HOM05D007495 ORTHO05D009552 4.3e-36 155.2 157 50.3
Cc01_g10460 Coffea canephora HOM05D007495 ORTHO05D009552 1.3e-35 153.7 168 50.0
Lj2C1012G12 Lonicera japonica HOM05D007495 ORTHO05D009552 1.7e-35 153.3 160 50.6
Migut.N02567 Erythranthe guttata HOM05D007495 ORTHO05D009552 2.8e-35 152.5 162 50.6
DCAR_018778 Daucus carota HOM05D007495 ORTHO05D009552 4.8e-35 151.8 164 48.8
Nitab4.5_0005092g0010 Nicotiana tabacum HOM05D007495 ORTHO05D009552 8.2e-35 151.0 162 50.6
Potri.004G215300 Populus trichocarpa HOM05D007495 ORTHO05D009552 1.8e-34 149.8 159 49.7
Sabra04G0146300 Salix brachista HOM05D007495 ORTHO05D009552 1.8e-34 149.8 158 50.0
Actinidia24137 Actinidia chinensis HOM05D007495 ORTHO05D009552 3.1e-34 149.1 157 50.3
arahy.Tifrunner.gnm1.ann1.KUS9HA Arachis hypogaea HOM05D007495 ORTHO05D009552 6.9e-34 147.9 165 49.1
Thecc.09G349500 Theobroma cacao HOM05D007495 ORTHO05D009552 9.1e-34 147.5 158 48.1
arahy.Tifrunner.gnm1.ann1.F5YJ3L Arachis hypogaea HOM05D007495 ORTHO05D009552 1.5e-33 146.7 153 50.3
Nitab4.5_0000329g0280 Nicotiana tabacum HOM05D007495 ORTHO05D009552 1.5e-33 146.7 160 50.0
SalBow3G3637 Salvia bowleyana HOM05D007495 ORTHO05D009552 2.0e-33 146.4 156 48.7
HanXRQChr09g0259381 Helianthus annuus HOM05D007495 ORTHO05D009552 3.4e-33 145.6 153 49.7
SalBow1G5708 Salvia bowleyana HOM05D007495 ORTHO05D009552 5.9e-33 144.8 159 46.5
PGSC0003DMG400000407 Solanum tuberosum HOM05D007495 ORTHO05D009552 7.7e-33 144.4 159 50.3
Ah.01g003160 Amaranthus hybridus HOM05D007495 ORTHO05D009552 1.0e-32 144.1 155 51.0
AUR62014942 Chenopodium quinoa HOM05D007495 ORTHO05D009552 1.0e-32 144.1 154 53.2
MBI11_g41957_MAGBIO Magnolia biondii HOM05D007495 ORTHO05D009552 1.7e-32 143.3 165 47.3
AUR62029199 Chenopodium quinoa HOM05D007495 ORTHO05D009552 2.2e-32 142.9 154 52.6
Peaxi162Scf00892g00019 Petunia axillaris HOM05D007495 ORTHO05D009552 2.2e-32 142.9 154 51.9
Sopen11g025970 Solanum pennellii HOM05D007495 ORTHO05D009552 2.9e-32 142.5 161 49.7
Lsat_1_v5_gn_2_96660 Lactuca sativa HOM05D007495 ORTHO05D009552 6.5e-32 141.4 166 46.4
PGR102G0900 Punica granatum HOM05D007495 ORTHO05D009552 8.5e-32 141.0 161 46.6
Sopen01g017570 Solanum pennellii HOM05D007495 ORTHO05D009552 1.1e-31 140.6 158 50.0
Glyma.13G322700 Glycine max HOM05D007495 ORTHO05D009552 1.4e-31 140.2 157 47.1
Hund08367 Selenicereus undatus HOM05D007495 ORTHO05D009552 1.4e-31 140.2 160 46.2
Solyc11g066240.3 Solanum lycopersicum HOM05D007495 ORTHO05D009552 1.4e-31 140.2 162 49.4
PGSC0003DMG400010906 Solanum tuberosum HOM05D007495 ORTHO05D009552 1.4e-31 140.2 160 48.8
Aqoxy1G01135 Aquilegia oxysepala HOM05D007495 ORTHO05D009552 4.2e-31 138.7 150 46.7
Phvul.005G131100 Phaseolus vulgaris HOM05D007495 ORTHO05D009552 5.5e-31 138.3 151 48.3
vmacro03264 Vaccinium macrocarpon HOM05D007495 ORTHO05D009552 5.5e-31 138.3 197 41.6
VMungo1080G0225 Vigna mungo HOM05D007495 ORTHO05D009552 2.1e-30 136.3 151 45.7
ATR1132G058 Amborella trichopoda HOM05D007495 ORTHO05D009552 2.3e-29 132.9 154 44.2
PSO210G3489 Papaver somniferum HOM05D007495 ORTHO05D009552 5.1e-29 131.7 164 44.5
HPP92_026750 Vanilla planifolia HOM05D007495 ORTHO05D009552 8.8e-29 131.0 153 45.8
Duzib147G1262 Durio zibethinus HOM05D007495 ORTHO05D009552 2.6e-28 129.4 153 43.1
PSO210G2188 Papaver somniferum HOM05D007495 ORTHO05D009552 2.6e-28 129.4 164 43.9
EL10Ac9g22596 Beta vulgaris HOM05D007495 ORTHO05D009552 1.4e-26 123.6 193 40.9
Duzib168G1093 Durio zibethinus HOM05D007495 ORTHO05D009552 2.4e-26 122.9 160 43.8
FvH4_3g30910 Fragaria vesca HOM05D007495 ORTHO05D009552 2.4e-26 122.9 132 47.0
Gohir.D11G005300 Gossypium hirsutum HOM05D007495 ORTHO05D009552 2.4e-26 122.9 157 40.8
Pp3c2_14140 Physcomitrium patens HOM05D007495 ORTHO05D009552 5.3e-26 121.7 161 40.4
Gorai.007G006500 Gossypium raimondii HOM05D007495 ORTHO05D009552 1.5e-25 120.2 157 40.1
Gohir.A11G006200 Gossypium hirsutum HOM05D007495 ORTHO05D009552 1.7e-24 116.7 157 38.9
CAN.G546.21 Capsicum annuum HOM05D007495 ORTHO05D009552 3.2e-23 112.5 92 59.8
unitig_27.g25050 Utricularia gibba HOM05D007495 ORTHO05D009552 5.5e-23 111.7 105 57.1
CDE08G1192 Ceratophyllum demersum HOM05D007495 ORTHO05D009552 3.0e-21 105.9 147 40.1
CSS0034387 Camellia sinensis var. sinensis HOM05D007495 ORTHO05D009552 1.2e-17 94.0 115 45.2
COL.COLO4_31833 Corchorus olitorius HOM05D000070 ORTHO05D005950 2.0e-17 93.2 92 50.0
Thecc.09G349300 Theobroma cacao HOM05D007495 ORTHO05D009552 1.3e-16 90.5 103 45.6
AagrBONN_evm.TU.Sc2ySwM_228.3308 Anthoceros agrestis HOM05D007495 ORTHO05D009552 5.0e-16 88.6 135 37.8
SEGI_19183 Sequoiadendron giganteum HOM05D007495 ORTHO05D009552 2.1e-14 83.2 98 43.9
arahy.Tifrunner.gnm1.ann1.48A6J1 Arachis hypogaea HOM05D007495 ORTHO05D009552 1.5e-12 77.0 90 47.8
Solyc01g034070.2 Solanum lycopersicum HOM05D007495 ORTHO05D009552 5.7e-12 75.1 108 43.5
QL01p015485 Quercus lobata HOM05D007495 ORTHO05D000007 2.8e-11 72.8 86 45.3
TAR636G3027 Trochodendron aralioides HOM05D007495 ORTHO05D009552 7.0e-10 68.2 66 54.5
Actinidia07176 Actinidia chinensis HOM05D007495 ORTHO05D009552 2.5e-07 59.7 42 64.3
arahy.Tifrunner.gnm1.ann1.SCS43X Arachis hypogaea HOM05D007495 ORTHO05D009552 9.4e-07 57.8 55 49.1


User provided reference genes

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