Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
THA.LOC104807761 Tarenaya hassleriana HOM05D006646 ORTHO05D008279 5.5e-151 537.7 294 100.0
CARHR247710 Cardamine hirsuta HOM05D006646 ORTHO05D008279 3.0e-64 249.6 307 54.7
Carub.0007s0091 Capsella rubella HOM05D006646 ORTHO05D008279 4.0e-61 239.2 317 53.3
BolC7t46749H Brassica oleracea HOM05D006646 ORTHO05D008279 9.0e-61 238.0 301 54.5
Sp7g36790 Schrenkiella parvula HOM05D006646 ORTHO05D008279 2.6e-60 236.5 312 52.6
A06p48720 Brassica napus HOM05D006646 ORTHO05D008279 7.6e-60 235.0 300 53.3
BraA06t27738Z Brassica rapa HOM05D006646 ORTHO05D008279 2.9e-59 233.0 302 52.6
AL7G10980 Arabidopsis lyrata HOM05D006646 ORTHO05D008279 3.2e-58 229.6 310 51.9
Thhalv10025960m.g Eutrema salsugineum HOM05D006646 ORTHO05D008279 3.5e-57 226.1 302 51.7
Aa31LG6G16210 Aethionema arabicum HOM05D006646 ORTHO05D008279 1.8e-56 223.8 321 48.9
AT4G39040 Arabidopsis thaliana HOM05D006646 ORTHO05D008279 1.1e-55 221.1 293 49.8
BcaNung01943 Brassica carinata HOM05D006646 ORTHO05D008279 1.1e-55 221.1 300 50.7
C07p63380 Brassica napus HOM05D006646 ORTHO05D008279 1.1e-55 221.1 300 50.7
CARHR112230 Cardamine hirsuta HOM05D006646 ORTHO05D008279 3.8e-51 206.1 253 52.6
Carub.0004s0039 Capsella rubella HOM05D006646 ORTHO05D008279 2.3e-48 196.8 253 51.4
AT2G21350 Arabidopsis thaliana HOM05D006646 ORTHO05D008279 5.1e-48 195.7 256 49.2
AL4G10520 Arabidopsis lyrata HOM05D006646 ORTHO05D008279 6.7e-48 195.3 255 49.8
Cpa.g.sc150.36 Carica papaya HOM05D006646 ORTHO05D008279 1.1e-47 194.5 305 47.5
Thecc.02G077600 Theobroma cacao HOM05D006646 ORTHO05D008279 1.9e-47 193.7 272 51.5
Sp4g00530 Schrenkiella parvula HOM05D006646 ORTHO05D008279 4.3e-47 192.6 254 49.6
Gohir.D12G030800 Gossypium hirsutum HOM05D006646 ORTHO05D008279 7.4e-47 191.8 141 73.0
Eucgr.G01718 Eucalyptus grandis HOM05D006646 ORTHO05D008279 1.3e-46 191.0 318 46.2
COL.COLO4_26029 Corchorus olitorius HOM05D006646 ORTHO05D008279 4.8e-46 189.1 152 71.1
Duzib132G1122 Durio zibethinus HOM05D006646 ORTHO05D008279 1.8e-45 187.2 282 48.6
BcaC02g08796 Brassica carinata HOM05D006646 ORTHO05D008279 4.0e-45 186.0 251 51.0
Gohir.A12G041400 Gossypium hirsutum HOM05D006646 ORTHO05D008279 6.9e-45 185.3 272 49.3
Gorai.008G031700 Gossypium raimondii HOM05D006646 ORTHO05D008279 9.0e-45 184.9 281 47.7
C04p50570 Brassica napus HOM05D006646 ORTHO05D008279 1.5e-44 184.1 248 51.2
CiPaw.06G130600 Carya illinoinensis HOM05D006646 ORTHO05D008279 1.5e-44 184.1 138 69.6
A04p16110 Brassica napus HOM05D006646 ORTHO05D008279 2.0e-44 183.7 240 53.8
BraA04t17251Z Brassica rapa HOM05D006646 ORTHO05D008279 2.0e-44 183.7 240 53.8
BolC4t26655H Brassica oleracea HOM05D006646 ORTHO05D008279 5.8e-44 182.2 247 52.6
Potri.009G122500 Populus trichocarpa HOM05D006646 ORTHO05D008279 1.3e-43 181.0 254 49.6
Manes.04G084900 Manihot esculenta HOM05D006646 ORTHO05D008279 1.9e-42 177.2 288 45.1
TWI75G0841 Tripterygium wilfordii HOM05D006646 ORTHO05D008279 9.3e-42 174.9 280 48.2
Thhalv10000312m.g Eutrema salsugineum HOM05D006646 ORTHO05D008279 1.6e-41 174.1 249 50.2
Ciclev10028627m.g Citrus clementina HOM05D006646 ORTHO05D008279 3.5e-41 172.9 287 44.6
Prupe.8G087400 Prunus persica HOM05D006646 ORTHO05D008279 6.0e-41 172.2 281 47.3
PGR042G2699 Punica granatum HOM05D006646 ORTHO05D008279 6.0e-41 172.2 157 61.8
QL11p045794 Quercus lobata HOM05D006646 ORTHO05D008279 7.9e-41 171.8 317 42.3
Cfa005079 Carpinus fangiana HOM05D006646 ORTHO05D008279 1.3e-40 171.0 141 65.2
Nn6g32216 Nelumbo nucifera HOM05D006646 ORTHO05D008279 1.3e-40 171.0 288 45.1
CSS0016085 Camellia sinensis var. sinensis HOM05D006646 ORTHO05D008279 5.1e-40 169.1 299 45.5
Peaxi162Scf00016g00142 Petunia axillaris HOM05D006646 ORTHO05D008279 6.7e-40 168.7 153 66.7
TAR376G0115 Trochodendron aralioides HOM05D006646 ORTHO05D008279 1.5e-39 167.5 287 43.2
Solyc01g110270.3 Solanum lycopersicum HOM05D006646 ORTHO05D008279 3.3e-39 166.4 294 46.9
PGSC0003DMG400003128 Solanum tuberosum HOM05D006646 ORTHO05D008279 4.3e-39 166.0 234 52.1
Hma1.2p1_0851F.1_g228260 Hydrangea macrophylla HOM05D006646 ORTHO05D008279 7.4e-39 165.2 139 64.7
Sopen01g052420 Solanum pennellii HOM05D006646 ORTHO05D008279 7.4e-39 165.2 288 45.5
CSS0027643 Camellia sinensis var. sinensis HOM05D006646 ORTHO05D008279 9.6e-39 164.9 299 44.5
arahy.Tifrunner.gnm1.ann1.I36BMJ Arachis hypogaea HOM05D006646 ORTHO05D008279 1.6e-38 164.1 142 62.0
GSVIVG01024200001 Vitis vinifera HOM05D006646 ORTHO05D008279 1.6e-38 164.1 237 46.4
Migut.B00188 Erythranthe guttata HOM05D006646 ORTHO05D008279 2.1e-38 163.7 237 49.4
CAN.G170.87 Capsicum annuum HOM05D006646 ORTHO05D008279 3.7e-38 162.9 281 44.5
MSTRG.16840 Avicennia marina HOM05D006646 ORTHO05D008279 4.8e-38 162.5 144 62.5
MD10G1065400 Malus domestica HOM05D006646 ORTHO05D008279 8.2e-38 161.8 238 47.9
MBI05_g30638_MAGBIO Magnolia biondii HOM05D006646 ORTHO05D008279 1.1e-37 161.4 139 60.4
HanXRQChr05g0139661 Helianthus annuus HOM05D006646 ORTHO05D008279 1.8e-37 160.6 109 72.5
MELO3C013428.2 Cucumis melo HOM05D006646 ORTHO05D008279 2.4e-37 160.2 138 61.6
TPR.G16241 Trifolium pratense HOM05D006646 ORTHO05D008279 3.1e-37 159.8 287 41.8
Atru.chr5.3116 Acer truncatum HOM05D006646 ORTHO05D008279 4.1e-37 159.5 242 45.0
Glyma.11G112300 Glycine max HOM05D006646 ORTHO05D008279 4.1e-37 159.5 246 43.1
SalBow6G1011 Salvia bowleyana HOM05D006646 ORTHO05D008279 5.3e-37 159.1 274 44.5
arahy.Tifrunner.gnm1.ann1.RI2JL3 Arachis hypogaea HOM05D006646 ORTHO05D008279 6.9e-37 158.7 136 61.8
Dinv23471 Davidia involucrata HOM05D006646 ORTHO05D008279 6.9e-37 158.7 258 45.3
SGA_v2.0_scaffold58G20474 Striga asiatica HOM05D006646 ORTHO05D008279 9.0e-37 158.3 109 71.6
Sed0000071 Sechium edule HOM05D006646 ORTHO05D008279 1.2e-36 157.9 284 42.6
Sed0001649 Sechium edule HOM05D006646 ORTHO05D008279 1.2e-36 157.9 256 44.5
vmacro02064 Vaccinium macrocarpon HOM05D006646 ORTHO05D008279 1.5e-36 157.5 109 70.6
FAN27G0283 Fragaria x ananassa HOM05D006646 ORTHO05D008279 4.5e-36 156.0 109 72.5
Lj3g0021213 Lotus japonicus HOM05D006646 ORTHO05D008279 4.5e-36 156.0 152 56.6
unitig_32.g11060 Utricularia gibba HOM05D006646 ORTHO05D008279 7.6e-36 155.2 106 74.5
FAN15G0580 Fragaria x ananassa HOM05D006646 ORTHO05D008279 1.3e-35 154.5 109 71.6
Lalb_Chr01g0002221 Lupinus albus HOM05D006646 ORTHO05D008279 1.7e-35 154.1 261 43.7
Sc18g0005310 Simmondsia chinensis HOM05D006646 ORTHO05D008279 1.7e-35 154.1 113 70.8
Aqoxy6G02397 Aquilegia oxysepala HOM05D006646 ORTHO05D008279 2.9e-35 153.3 152 56.6
Lsat_1_v5_gn_4_68441 Lactuca sativa HOM05D006646 ORTHO05D008279 2.9e-35 153.3 170 55.3
ATR0661G343 Amborella trichopoda HOM05D006646 ORTHO05D008279 5.0e-35 152.5 147 58.5
ECA247G1974 Erigeron canadensis HOM05D006646 ORTHO05D008279 5.0e-35 152.5 106 72.6
CDE09G0634 Ceratophyllum demersum HOM05D006646 ORTHO05D008279 8.5e-35 151.8 169 53.3
AUR62016804 Chenopodium quinoa HOM05D006646 ORTHO05D008279 1.1e-34 151.4 163 57.1
Nitab4.5_0010034g0020 Nicotiana tabacum HOM05D006646 ORTHO05D008279 1.4e-34 151.0 187 54.5
RcHm_v2.0_Chr6g0267071 Rosa chinensis HOM05D006646 ORTHO05D008279 1.9e-34 150.6 256 42.6
Oeu008579.1 Olea europaea HOM05D006646 ORTHO05D008279 2.5e-34 150.2 274 43.1
Phvul.011G040400 Phaseolus vulgaris HOM05D006646 ORTHO05D008279 4.2e-34 149.4 180 50.6
EL10Ac9g21659 Beta vulgaris HOM05D006646 ORTHO05D008279 5.5e-34 149.1 138 61.6
Ca_20923_v3 Cicer arietinum L. HOM05D006646 ORTHO05D008279 1.6e-33 147.5 282 40.1
ClCG02G004640 Citrullus lanatus HOM05D006646 ORTHO05D008279 1.6e-33 147.5 273 41.4
Haze_02302 Corylus avellana HOM05D006646 ORTHO05D008279 1.6e-33 147.5 259 42.9
Cc02_g17030 Coffea canephora HOM05D006646 ORTHO05D008279 2.7e-33 146.7 200 46.0
CsaV3_7G000290 Cucumis sativus L. HOM05D006646 ORTHO05D008279 4.6e-33 146.0 276 40.6
Medtr4g071330 Medicago truncatula HOM05D006646 ORTHO05D008279 4.6e-33 146.0 266 44.4
PSO541G0619 Papaver somniferum HOM05D006646 ORTHO05D008279 6.1e-33 145.6 281 39.5
VMungo1127G0939 Vigna mungo HOM05D006646 ORTHO05D008279 7.9e-33 145.2 241 46.1
Psat0s2721g0040 Pisum sativum HOM05D006646 ORTHO05D008279 1.3e-32 144.4 280 41.1
CDE02G3850 Ceratophyllum demersum HOM05D006646 ORTHO05D008279 3.9e-32 142.9 170 50.6
FvH4_2g10110 Fragaria vesca HOM05D006646 ORTHO05D008279 3.9e-32 142.9 224 45.1
FAN24G1192 Fragaria x ananassa HOM05D006646 ORTHO05D008279 1.1e-31 141.4 224 45.1
Hund06269 Selenicereus undatus HOM05D006646 ORTHO05D008279 1.3e-30 137.9 215 47.0
Os10g0512500 Oryza sativa ssp. japonica HOM05D006646 ORTHO05D008279 6.3e-30 135.6 140 52.1
DCAR_022798 Daucus carota HOM05D006646 ORTHO05D008279 8.2e-30 135.2 236 42.4
HPP92_007403 Vanilla planifolia HOM05D006646 ORTHO05D008279 3.4e-28 129.8 217 43.3
Nitab4.5_0002723g0110 Nicotiana tabacum HOM05D006646 ORTHO05D008279 9.7e-23 111.7 130 56.9
Mapoly0113s0060 Marchantia polymorpha HOM05D006646 ORTHO05D008279 2.9e-19 100.1 120 42.5
BcaNung01286 Brassica carinata HOM05D006646 ORTHO05D008279 6.5e-19 99.0 112 58.0
AUR62010412 Chenopodium quinoa HOM05D006646 ORTHO05D008279 1.1e-18 98.2 133 45.9
AagrBONN_evm.TU.Sc2ySwM_344.4239 Anthoceros agrestis HOM05D006646 ORTHO05D008279 9.4e-18 95.1 106 48.1
CBR_g11057 Chara braunii HOM05D006646 ORTHO05D008279 1.8e-16 90.9 91 51.6
arahy.Tifrunner.gnm1.ann1.1G50NI Arachis hypogaea HOM05D006646 ORTHO05D008279 3.0e-16 90.1 55 78.2
FAN09G3166 Fragaria x ananassa HOM05D006646 ORTHO05D008279 6.7e-16 89.0 62 69.4
FAN24G0918 Fragaria x ananassa HOM05D001806 ORTHO05D002069 6.7e-16 89.0 61 70.5
FAN19G2814 Fragaria x ananassa HOM05D006646 ORTHO05D008279 2.0e-15 87.4 60 71.7
FAN05G0067 Fragaria x ananassa HOM05D006646 ORTHO05D008279 7.4e-15 85.5 62 66.1
FAN05G1359 Fragaria x ananassa HOM05D006646 ORTHO05D008279 7.4e-15 85.5 62 66.1
FAN18G1095 Fragaria x ananassa HOM05D006646 ORTHO05D008279 4.8e-14 82.8 59 66.1
Pp3c1_22260 Physcomitrium patens HOM05D006646 ORTHO05D008279 1.1e-13 81.6 211 33.2
CANSAT11G0453 Cannabis sativa HOM05D006646 ORTHO05D008279 9.1e-13 78.6 84 56.0
Zm00001eb220380 Zea mays HOM05D006646 ORTHO05D008279 1.9e-10 70.9 56 66.1
Haze_22123 Corylus avellana HOM05D006646 ORTHO05D008279 4.2e-10 69.7 45 77.8
Lj5P190T58 Lonicera japonica HOM05D006646 ORTHO05D008279 4.2e-10 69.7 50 68.0
SMO367G1025 Selaginella moellendorffii HOM05D006646 ORTHO05D008279 8.0e-09 65.5 116 37.1


User provided reference genes

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