Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
THA.LOC104806670 Tarenaya hassleriana HOM05D006677 ORTHO05D008348 0.0e+00 1565.1 775 100.0
AL8G10640 Arabidopsis lyrata HOM05D006677 ORTHO05D008348 0.0e+00 1134.4 796 71.7
Thhalv10000783m.g Eutrema salsugineum HOM05D006677 ORTHO05D008348 0.0e+00 1119.8 795 70.8
CARHR173970 Cardamine hirsuta HOM05D006677 ORTHO05D008348 0.0e+00 1119.0 791 70.3
Carub.0008s0038 Capsella rubella HOM05D006677 ORTHO05D008348 0.0e+00 1116.3 792 71.1
Sp2g12115 Schrenkiella parvula HOM05D006677 ORTHO05D008348 0.0e+00 1104.7 795 70.2
AT5G47400 Arabidopsis thaliana HOM05D006677 ORTHO05D008348 0.0e+00 1099.7 798 69.7
BolC7t43648H Brassica oleracea HOM05D006677 ORTHO05D008348 0.0e+00 1094.7 788 70.7
BcaC06g34255 Brassica carinata HOM05D006677 ORTHO05D008348 0.0e+00 1094.3 795 70.1
C07p31040 Brassica napus HOM05D006677 ORTHO05D008348 0.0e+00 1092.0 788 70.4
A06p45110 Brassica napus HOM05D006677 ORTHO05D008348 1.8e-310 1068.9 795 69.1
Aa31sc151G40 Aethionema arabicum HOM05D006677 ORTHO05D008348 3.5e-298 1028.1 745 68.5
BraA06t27381Z Brassica rapa HOM05D006677 ORTHO05D008348 3.5e-298 1028.1 788 67.3
Thecc.03G248200 Theobroma cacao HOM05D006677 ORTHO05D008348 5.8e-285 984.2 796 63.6
COL.COLO4_37128 Corchorus olitorius HOM05D006677 ORTHO05D008348 2.9e-284 981.9 805 61.7
CANSAT21G0792 Cannabis sativa HOM05D006677 ORTHO05D008348 5.5e-283 977.6 799 61.7
Gorai.008G233700 Gossypium raimondii HOM05D006677 ORTHO05D008348 6.9e-278 960.7 798 61.8
Gohir.D12G218100 Gossypium hirsutum HOM05D006677 ORTHO05D008348 5.8e-277 957.6 798 61.5
Duzib068G0477 Durio zibethinus HOM05D006677 ORTHO05D008348 3.8e-276 954.9 798 61.9
Gohir.A12G215500 Gossypium hirsutum HOM05D006677 ORTHO05D008348 2.3e-273 945.7 795 61.0
Atru.chr9.1276 Acer truncatum HOM05D006677 ORTHO05D008348 1.5e-272 943.0 793 60.4
MD06G1053300 Malus domestica HOM05D006677 ORTHO05D008348 2.6e-269 932.2 808 59.5
Manes.02G041400 Manihot esculenta HOM05D006677 ORTHO05D008348 1.7e-268 929.5 801 59.1
Ciclev10018892m.g Citrus clementina HOM05D006677 ORTHO05D008348 1.4e-267 926.4 807 59.2
BcaC06g31392 Brassica carinata HOM05D006677 ORTHO05D008348 1.2e-266 923.3 778 63.1
MD04G1060300 Malus domestica HOM05D006677 ORTHO05D008348 6.1e-266 921.0 811 58.7
BcaC06g31390 Brassica carinata HOM05D006677 ORTHO05D008348 2.3e-265 919.1 663 69.4
Prupe.5G065400 Prunus persica HOM05D006677 ORTHO05D008348 1.9e-264 916.0 803 59.0
RcHm_v2.0_Chr7g0203921 Rosa chinensis HOM05D006677 ORTHO05D008348 1.7e-263 912.9 785 59.5
Cfa012688 Carpinus fangiana HOM05D006677 ORTHO05D008348 5.3e-262 907.9 801 60.2
Duzib205G2017 Durio zibethinus HOM05D006677 ORTHO05D008348 2.9e-260 902.1 798 58.9
FvH4_5g19410 Fragaria vesca HOM05D006677 ORTHO05D008348 8.5e-260 900.6 790 58.5
PGR031G0681 Punica granatum HOM05D006677 ORTHO05D008348 3.2e-259 898.7 797 56.8
FAN04G1892 Fragaria x ananassa HOM05D006677 ORTHO05D008348 1.6e-258 896.3 790 58.2
TWI60G0317 Tripterygium wilfordii HOM05D006677 ORTHO05D008348 2.1e-258 896.0 793 56.9
FAN13G0013 Fragaria x ananassa HOM05D006677 ORTHO05D008348 3.6e-258 895.2 791 57.9
FAN18G1193 Fragaria x ananassa HOM05D006677 ORTHO05D008348 7.9e-258 894.0 790 58.2
CSS0025591 Camellia sinensis var. sinensis HOM05D006677 ORTHO05D008348 2.6e-256 889.0 794 57.1
Haze_07944 Corylus avellana HOM05D006677 ORTHO05D008348 3.3e-256 888.6 858 55.9
FAN08G3018 Fragaria x ananassa HOM05D006677 ORTHO05D008348 4.4e-256 888.3 790 57.8
Lj2C223G6 Lonicera japonica HOM05D006677 ORTHO05D008348 9.7e-256 887.1 798 56.3
Hma1.2p1_0316F.1_g122840 Hydrangea macrophylla HOM05D006677 ORTHO05D008348 2.2e-255 885.9 795 57.2
Potri.001G155800 Populus trichocarpa HOM05D006677 ORTHO05D008348 1.4e-254 883.2 794 57.8
CiPaw.12G050300 Carya illinoinensis HOM05D006677 ORTHO05D008348 3.4e-253 878.6 801 59.1
vmacro14066 Vaccinium macrocarpon HOM05D006677 ORTHO05D008348 1.3e-252 876.7 796 57.7
Nitab4.5_0001381g0100 Nicotiana tabacum HOM05D006677 ORTHO05D008348 2.2e-252 875.9 788 55.8
Rhsim07G0111300 Rhododendron simsii HOM05D006677 ORTHO05D008348 1.4e-249 866.7 799 57.7
Migut.A01134 Erythranthe guttata HOM05D006677 ORTHO05D008348 1.7e-247 859.8 803 54.7
TAR374G0600 Trochodendron aralioides HOM05D006677 ORTHO05D008348 1.7e-247 859.8 807 55.9
Sopen08g026930 Solanum pennellii HOM05D006677 ORTHO05D008348 3.7e-247 858.6 791 55.0
QL12p011426 Quercus lobata HOM05D006677 ORTHO05D008348 8.2e-247 857.4 856 54.3
CAN.G1178.20 Capsicum annuum HOM05D006677 ORTHO05D008348 1.4e-246 856.7 794 53.9
CSS0006614 Camellia sinensis var. sinensis HOM05D006677 ORTHO05D008348 5.3e-246 854.7 794 55.4
Sc22g0000980 Simmondsia chinensis HOM05D006677 ORTHO05D008348 5.3e-246 854.7 799 54.7
Rhsim07G0110800 Rhododendron simsii HOM05D006677 ORTHO05D008348 7.0e-246 854.4 820 56.2
Cc08_g12180 Coffea canephora HOM05D006677 ORTHO05D008348 1.6e-245 853.2 786 55.0
Solyc08g078440.3 Solanum lycopersicum HOM05D006677 ORTHO05D008348 7.7e-245 850.9 791 54.9
Hund14577 Selenicereus undatus HOM05D006677 ORTHO05D008348 1.0e-244 850.5 795 54.2
arahy.Tifrunner.gnm1.ann1.WU4RWF Arachis hypogaea HOM05D006677 ORTHO05D008348 2.2e-244 849.4 818 54.8
arahy.Tifrunner.gnm1.ann1.IBE8NF Arachis hypogaea HOM05D006677 ORTHO05D008348 2.9e-244 849.0 818 54.6
Peaxi162Scf00209g00130 Petunia axillaris HOM05D006677 ORTHO05D008348 8.5e-244 847.4 789 55.0
MSTRG.12123 Avicennia marina HOM05D006677 ORTHO05D008348 1.2e-242 843.6 787 54.3
Nn6g33880 Nelumbo nucifera HOM05D006677 ORTHO05D008348 2.1e-242 842.8 806 54.1
AUR62007111 Chenopodium quinoa HOM05D006677 ORTHO05D008348 8.0e-242 840.9 799 53.7
AUR62019973 Chenopodium quinoa HOM05D006677 ORTHO05D008348 8.0e-242 840.9 799 53.4
SGA_v2.0_scaffold104G30177 Striga asiatica HOM05D006677 ORTHO05D008348 2.3e-241 839.3 823 52.1
Manes.01G083200 Manihot esculenta HOM05D006677 ORTHO05D008348 7.0e-238 827.8 798 54.6
Ah.12g054330 Amaranthus hybridus HOM05D006677 ORTHO05D008348 1.0e-236 823.9 791 53.1
EL10Ac5g12357 Beta vulgaris HOM05D006677 ORTHO05D008348 1.0e-236 823.9 796 53.4
Nitab4.5_0002289g0120 Nicotiana tabacum HOM05D006677 ORTHO05D008348 3.8e-236 822.0 793 53.6
Dinv21656 Davidia involucrata HOM05D006677 ORTHO05D008348 8.0e-234 814.3 634 63.1
Lalb_Chr05g0221161 Lupinus albus HOM05D006677 ORTHO05D008348 3.0e-233 812.4 793 54.6
Lj4g0000262 Lotus japonicus HOM05D006677 ORTHO05D008348 1.5e-232 810.1 798 53.8
Aqoxy7G00821 Aquilegia oxysepala HOM05D006677 ORTHO05D008348 1.7e-231 806.6 804 52.2
Ca_21980_v3 Cicer arietinum L. HOM05D006677 ORTHO05D008348 3.7e-231 805.4 804 53.7
SalBow6G5281 Salvia bowleyana HOM05D006677 ORTHO05D008348 8.3e-231 804.3 848 49.3
DCAR_004989 Daucus carota HOM05D006677 ORTHO05D008348 1.1e-230 803.9 789 51.6
Actinidia26803 Actinidia chinensis HOM05D006677 ORTHO05D008348 3.4e-224 782.3 639 61.0
Glyma.17G143800 Glycine max HOM05D006677 ORTHO05D008348 9.2e-222 774.2 802 53.2
HanXRQChr16g0501081 Helianthus annuus HOM05D006677 ORTHO05D008348 1.7e-220 770.0 790 50.6
Medtr4g100700 Medicago truncatula HOM05D006677 ORTHO05D008348 1.9e-219 766.5 811 52.0
Lsat_1_v5_gn_6_18041 Lactuca sativa HOM05D006677 ORTHO05D008348 1.6e-218 763.5 789 50.2
Phvul.003G222500 Phaseolus vulgaris HOM05D006677 ORTHO05D008348 1.5e-211 740.3 798 52.1
HanXRQChr08g0227751 Helianthus annuus HOM05D006677 ORTHO05D008348 9.5e-211 737.6 783 48.8
VMungo0251G0668 Vigna mungo HOM05D006677 ORTHO05D008348 1.6e-210 736.9 803 51.8
ECA233G6125 Erigeron canadensis HOM05D006677 ORTHO05D008348 1.5e-208 730.3 745 51.4
Psat4g072920 Pisum sativum HOM05D006677 ORTHO05D008348 2.6e-208 729.6 782 50.6
Oeu017057.2 Olea europaea HOM05D006677 ORTHO05D008348 3.2e-206 722.6 826 48.5
CDE11G0086 Ceratophyllum demersum HOM05D006677 ORTHO05D008348 4.3e-203 712.2 778 47.9
HPP92_022463 Vanilla planifolia HOM05D006677 ORTHO05D008348 1.6e-186 657.1 808 44.3
Sabra01G0125500 Salix brachista HOM05D006677 ORTHO05D008348 1.8e-177 627.1 651 53.3
Eucgr.D02100 Eucalyptus grandis HOM05D006677 ORTHO05D008348 1.4e-174 617.5 589 56.2
Glyma.05G062000 Glycine max HOM05D006677 ORTHO05D008348 1.1e-166 591.3 609 54.0
ATR0057G118 Amborella trichopoda HOM05D006677 ORTHO05D008348 1.2e-160 571.2 805 41.9
Zm00001eb000330 Zea mays HOM05D006677 ORTHO05D008348 4.8e-138 496.1 794 39.7
unitig_21.g20314 Utricularia gibba HOM05D006677 ORTHO05D008348 5.4e-113 412.9 811 34.4
Actinidia10841 Actinidia chinensis HOM05D006677 ORTHO05D008348 7.5e-107 392.5 792 35.4
Pp3c19_23280 Physcomitrium patens HOM05D006677 ORTHO05D008348 1.3e-95 355.1 847 32.5
TPR.G36090 Trifolium pratense HOM05D006677 ORTHO05D008348 2.5e-94 350.9 412 47.3
GSVIVG01006276001 Vitis vinifera HOM05D006677 ORTHO05D008348 1.6e-93 348.2 256 64.1
AagrBONN_evm.TU.Sc2ySwM_228.2440 Anthoceros agrestis HOM05D006677 ORTHO05D008348 2.2e-82 311.2 866 29.9
TPR.G37689 Trifolium pratense HOM05D006677 ORTHO05D008348 8.1e-77 292.7 306 51.0
GSVIVG01006275001 Vitis vinifera HOM05D006677 ORTHO05D000005 2.5e-70 271.2 251 56.6
Cpa.g.sc3684.1 Carica papaya HOM05D006677 ORTHO05D008348 4.8e-69 266.9 250 54.4
TAR365G0661 Trochodendron aralioides HOM05D006677 ORTHO05D008348 6.9e-68 263.1 295 49.8
DCAR_004979 Daucus carota HOM05D006677 ORTHO05D008348 6.0e-64 250.0 290 47.2
DCAR_004986 Daucus carota HOM05D006677 ORTHO05D008348 6.0e-64 250.0 290 46.9
TAR633G2042 Trochodendron aralioides HOM05D006677 ORTHO05D008348 7.4e-46 189.9 177 53.7
TAR629G1120 Trochodendron aralioides HOM05D006677 ORTHO05D008348 6.3e-45 186.8 160 57.5
CBR_g16835 Chara braunii HOM05D000019 ORTHO05D000048 7.4e-38 163.3 1009 21.9
CAN.G26.36 Capsicum annuum HOM05D006677 ORTHO05D008348 3.2e-33 147.9 169 45.0
Os10g0560500 Oryza sativa ssp. japonica HOM05D006677 ORTHO05D008348 1.5e-30 139.0 275 33.8
DCAR_004983 Daucus carota HOM05D006677 ORTHO05D008348 3.3e-30 137.9 203 39.4
DCAR_004974 Daucus carota HOM05D006677 ORTHO05D008348 5.3e-28 130.6 208 38.0
DCAR_004984 Daucus carota HOM05D006677 ORTHO05D008348 5.9e-27 127.1 88 69.3
MCO13G224 Micromonas commoda HOM05D006677 ORTHO05D008348 6.5e-18 97.1 675 21.6
Cre06.g278126 Chlamydomonas reinhardtii HOM05D006677 ORTHO05D008348 4.2e-17 94.4 193 33.7
TPR.G36480 Trifolium pratense HOM05D004733 ORTHO05D008348 5.9e-11 73.9 46 69.6
DCAR_004972 Daucus carota HOM05D006677 ORTHO05D008348 1.6e-08 65.9 116 37.9
ECA233G4789 Erigeron canadensis HOM05D006677 ORTHO05D008348 4.0e-07 61.2 51 60.8
CAN.G1178.24 Capsicum annuum HOM05D006677 ORTHO05D008348 8.8e-07 60.1 62 37.1
ECA234G1619 Erigeron canadensis HOM05D000206 ORTHO05D000232 3.4e-06 58.2 50 58.0


User provided reference genes

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