Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
THA.LOC104805912 Tarenaya hassleriana HOM05D007729 ORTHO05D009724 2.4e-309 1064.7 543 100.0
Sp1g07780 Schrenkiella parvula HOM05D007729 ORTHO05D009724 3.1e-224 781.9 546 72.9
Carub.0001s0852 Capsella rubella HOM05D007729 ORTHO05D009724 9.0e-224 780.4 546 72.9
Aa31LG1G6090 Aethionema arabicum HOM05D007729 ORTHO05D009724 2.9e-222 775.4 531 73.3
AL1G19670 Arabidopsis lyrata HOM05D007729 ORTHO05D009724 1.4e-221 773.1 549 71.9
Thhalv10007209m.g Eutrema salsugineum HOM05D007729 ORTHO05D009724 3.5e-220 768.5 569 69.2
C08p12530 Brassica napus HOM05D007729 ORTHO05D009724 1.3e-217 760.0 537 72.8
BraA08t35386Z Brassica rapa HOM05D007729 ORTHO05D009724 1.3e-211 740.0 521 72.6
AT1G09195 Arabidopsis thaliana HOM05D007729 ORTHO05D009724 2.3e-211 739.2 504 74.0
A08p34750 Brassica napus HOM05D007729 ORTHO05D009724 3.0e-211 738.8 521 72.4
BolC8t48891H Brassica oleracea HOM05D007729 ORTHO05D009724 3.9e-211 738.4 522 72.4
BcaC07g38483 Brassica carinata HOM05D007729 ORTHO05D009724 9.0e-192 674.1 529 67.5
Cpa.g.sc48.137 Carica papaya HOM05D007729 ORTHO05D009724 6.5e-174 614.8 544 60.5
Potri.005G020100 Populus trichocarpa HOM05D007729 ORTHO05D009724 8.5e-166 587.8 539 57.5
Ciclev10000704m.g Citrus clementina HOM05D007729 ORTHO05D009724 1.6e-164 583.6 551 57.4
CARHR009150 Cardamine hirsuta HOM05D007729 ORTHO05D009724 1.1e-160 570.9 365 79.5
Sabra05G0026100 Salix brachista HOM05D005361 ORTHO05D006518 2.4e-160 569.7 539 55.5
Dinv24421 Davidia involucrata HOM05D007729 ORTHO05D009724 7.0e-160 568.2 537 56.8
Atru.chr2.143 Acer truncatum HOM05D007729 ORTHO05D009724 2.7e-159 566.2 567 56.1
QL03p018088 Quercus lobata HOM05D007729 ORTHO05D009724 8.5e-158 561.2 546 57.5
TAR365G0479 Trochodendron aralioides HOM05D007729 ORTHO05D009724 2.3e-155 553.1 552 56.5
Manes.09G175100 Manihot esculenta HOM05D007729 ORTHO05D009724 2.0e-154 550.1 545 56.0
Actinidia16844 Actinidia chinensis HOM05D007729 ORTHO05D009724 3.5e-151 539.3 548 54.6
Hma1.2p1_1320F.1_g275420 Hydrangea macrophylla HOM05D007729 ORTHO05D009724 3.5e-151 539.3 513 56.5
HanXRQChr09g0268291 Helianthus annuus HOM05D007729 ORTHO05D009724 7.7e-151 538.1 533 54.2
Gorai.013G128200 Gossypium raimondii HOM05D007729 ORTHO05D009724 5.0e-150 535.4 541 55.5
GSVIVG01031211001 Vitis vinifera HOM05D007729 ORTHO05D009724 3.3e-149 532.7 561 51.2
Gohir.D13G114300 Gossypium hirsutum HOM05D007729 ORTHO05D009724 4.2e-149 532.3 541 55.1
Duzib177G0448 Durio zibethinus HOM05D007729 ORTHO05D009724 2.1e-148 530.0 579 52.5
RcHm_v2.0_Chr3g0456781 Rosa chinensis HOM05D007729 ORTHO05D009724 2.1e-148 530.0 552 53.1
Nn4g25665 Nelumbo nucifera HOM05D007729 ORTHO05D009724 2.8e-148 529.6 547 53.9
Gohir.A13G111500 Gossypium hirsutum HOM05D007729 ORTHO05D009724 3.6e-148 529.3 541 54.7
Lj9A208G24 Lonicera japonica HOM05D007729 ORTHO05D009724 8.0e-148 528.1 523 53.7
Lsat_1_v5_gn_7_73440 Lactuca sativa HOM05D007729 ORTHO05D009724 3.0e-147 526.2 555 51.7
ECA236G3528 Erigeron canadensis HOM05D007729 ORTHO05D009724 5.7e-146 521.9 530 53.0
FAN05G4184 Fragaria x ananassa HOM05D007729 ORTHO05D009724 4.1e-144 515.8 565 52.7
FvH4_6g07160 Fragaria vesca HOM05D007729 ORTHO05D009724 9.2e-144 514.6 513 56.1
FAN14G4369 Fragaria x ananassa HOM05D007729 ORTHO05D009724 2.0e-143 513.5 569 52.0
CANSAT54G0579 Cannabis sativa HOM05D007729 ORTHO05D009724 4.6e-143 512.3 554 53.2
CSS0040240 Camellia sinensis var. sinensis HOM05D007729 ORTHO05D009724 5.9e-143 511.9 585 51.3
Haze_04087 Corylus avellana HOM05D007729 ORTHO05D009724 6.6e-142 508.4 491 59.3
TWI56G1038 Tripterygium wilfordii HOM05D007729 ORTHO05D009724 2.5e-141 506.5 456 58.6
MBI18_g24956_MAGBIO Magnolia biondii HOM05D007729 ORTHO05D009724 3.3e-141 506.1 556 51.8
COL.COLO4_04132 Corchorus olitorius HOM05D007729 ORTHO05D009724 4.3e-141 505.8 542 51.8
Lalb_Chr02g0147931 Lupinus albus HOM05D007729 ORTHO05D009724 2.1e-140 503.4 535 53.6
Thecc.05G320400 Theobroma cacao HOM05D007729 ORTHO05D009724 2.1e-140 503.4 542 51.3
PGR031G2787 Punica granatum HOM05D007729 ORTHO05D009724 6.8e-139 498.4 549 52.8
FAN09G4655 Fragaria x ananassa HOM05D007729 ORTHO05D009724 1.2e-138 497.7 562 52.3
PSO210G3025 Papaver somniferum HOM05D007729 ORTHO05D009724 1.4e-136 490.7 555 50.6
vmacro01545 Vaccinium macrocarpon HOM05D007729 ORTHO05D009724 3.5e-135 486.1 509 53.6
Nitab4.5_0000368g0330 Nicotiana tabacum HOM05D007729 ORTHO05D009724 6.0e-135 485.3 569 48.5
PSO761G0658 Papaver somniferum HOM05D007729 ORTHO05D009724 7.8e-135 485.0 556 49.5
PGSC0003DMG400024735 Solanum tuberosum HOM05D007729 ORTHO05D009724 2.3e-134 483.4 555 48.8
EL10Ac4g09861 Beta vulgaris HOM05D007729 ORTHO05D009724 3.3e-133 479.6 547 50.8
DCAR_021068 Daucus carota HOM05D007729 ORTHO05D009724 4.3e-133 479.2 529 49.9
DCAR_021070 Daucus carota HOM05D007729 ORTHO05D009724 4.3e-133 479.2 529 49.9
Peaxi162Scf00673g00025 Petunia axillaris HOM05D007729 ORTHO05D009724 5.6e-133 478.8 545 48.1
Solyc01g100260.4 Solanum lycopersicum HOM05D007729 ORTHO05D009724 4.7e-132 475.7 555 48.3
Sopen01g043770 Solanum pennellii HOM05D007729 ORTHO05D009724 1.1e-131 474.6 555 48.1
Oeu053698.1 Olea europaea HOM05D007729 ORTHO05D009724 2.3e-131 473.4 517 51.3
Nitab4.5_0006072g0050 Nicotiana tabacum HOM05D007729 ORTHO05D009724 4.0e-131 472.6 592 46.8
Cc02_g34750 Coffea canephora HOM05D007729 ORTHO05D009724 3.4e-130 469.5 540 48.0
Migut.B00991 Erythranthe guttata HOM05D007729 ORTHO05D009724 4.4e-130 469.2 549 48.5
MSTRG.20396 Avicennia marina HOM05D007729 ORTHO05D009724 1.3e-129 467.6 554 48.9
SalBow7G3736 Salvia bowleyana HOM05D007729 ORTHO05D009724 2.3e-126 456.8 549 47.4
CAN.G1273.5 Capsicum annuum HOM05D007729 ORTHO05D009724 3.9e-126 456.1 550 45.8
CDE12G0453 Ceratophyllum demersum HOM05D007729 ORTHO05D009724 1.6e-124 450.7 531 47.3
AUR62000694 Chenopodium quinoa HOM05D007729 ORTHO05D009724 5.8e-122 442.2 541 48.4
Prupe.6G315600 Prunus persica HOM05D007729 ORTHO05D009724 4.2e-112 409.5 377 57.6
AUR62005264 Chenopodium quinoa HOM05D007729 ORTHO05D009724 9.3e-112 408.3 549 46.4
SGA_v2.0_scaffold53G19323 Striga asiatica HOM05D007729 ORTHO05D009724 9.3e-112 408.3 467 47.8
ATR0706G084 Amborella trichopoda HOM05D007729 ORTHO05D009724 1.3e-110 404.4 569 41.7
SEGI_22290 Sequoiadendron giganteum HOM05D007729 ORTHO05D009724 1.0e-102 378.3 551 39.7
Aqoxy2G02816 Aquilegia oxysepala HOM05D007729 ORTHO05D009724 1.7e-102 377.5 364 56.0
Pp3c5_5230 Physcomitrium patens HOM05D007729 ORTHO05D009724 1.8e-94 350.9 551 38.3
Pp3c6_24770 Physcomitrium patens HOM05D007729 ORTHO05D009724 1.1e-93 348.2 555 38.0
Hund21744 Selenicereus undatus HOM05D007729 ORTHO05D009724 1.5e-90 337.8 524 41.8
vmacro05864 Vaccinium macrocarpon HOM05D007729 ORTHO05D009724 3.4e-90 336.7 374 54.0
Sc16g0008910 Simmondsia chinensis HOM05D007729 ORTHO05D009724 7.6e-90 335.5 378 49.7
Pp3c27_4900 Physcomitrium patens HOM05D007729 ORTHO05D009724 6.5e-89 332.4 550 38.4
Atru.chr2.136 Acer truncatum HOM05D007729 ORTHO05D009724 1.6e-87 327.8 303 60.1
Duzib147G0321 Durio zibethinus HOM05D007729 ORTHO05D009724 2.1e-87 327.4 362 54.1
vmacro20072 Vaccinium macrocarpon HOM05D007729 ORTHO05D009724 5.3e-75 286.2 374 49.5
PRCOL_00006313 Prasinoderma coloniale HOM05D007729 ORTHO05D009724 6.1e-71 272.7 628 31.8
CARHR009140 Cardamine hirsuta HOM05D007729 ORTHO05D009724 7.2e-56 222.6 186 61.8
Haze_25193 Corylus avellana HOM05D007729 ORTHO05D009724 4.4e-45 186.8 187 57.8
Aqoxy2G02815 Aquilegia oxysepala HOM05D007729 ORTHO05D009724 2.7e-34 151.0 164 50.0
Haze_15474 Corylus avellana HOM05D000683 ORTHO05D000507 2.9e-33 147.5 123 65.0
Haze_25604 Corylus avellana HOM05D007729 ORTHO05D009724 2.3e-22 111.3 123 52.8
MD12G1208200 Malus domestica HOM05D007729 ORTHO05D009724 5.4e-19 100.1 119 43.7
PGSC0003DMG400033855 Solanum tuberosum HOM05D007729 ORTHO05D009724 5.1e-09 67.0 75 37.3
CBR_g1071 Chara braunii HOM05D036030 ORTHO05D009724 1.2e-07 62.4 164 29.3


User provided reference genes

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