Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
THA.LOC104798479 Tarenaya hassleriana HOM05D000162 ORTHO05D000090 1.3e-20 105.1 53 100.0
THA.LOC104804939 Tarenaya hassleriana HOM05D000162 ORTHO05D000090 1.3e-20 105.1 53 100.0
THA.LOC104813194 Tarenaya hassleriana HOM05D000162 ORTHO05D000090 1.1e-16 92.0 44 100.0
THA.LOC104798481 Tarenaya hassleriana HOM05D000162 ORTHO05D000090 3.7e-15 87.0 53 83.0
THA.LOC104801133 Tarenaya hassleriana HOM05D000162 ORTHO05D000090 2.4e-14 84.3 44 88.6
THA.LOC104801248 Tarenaya hassleriana HOM05D000162 ORTHO05D000090 2.6e-13 80.9 44 93.2
THA.LOC104808474 Tarenaya hassleriana HOM05D000162 ORTHO05D000090 1.3e-12 78.6 44 86.4
THA.LOC109116016 Tarenaya hassleriana HOM05D000162 ORTHO05D000090 1.7e-12 78.2 39 97.4
THA.LOC109116017 Tarenaya hassleriana HOM05D000162 ORTHO05D000090 4.9e-12 76.6 37 100.0
THA.LOC104824531 Tarenaya hassleriana HOM05D000162 ORTHO05D000090 2.7e-10 70.9 44 75.0
THA.LOC104806963 Tarenaya hassleriana HOM05D000162 ORTHO05D000090 7.9e-10 69.3 44 75.0
THA.LOC104806932 Tarenaya hassleriana HOM05D000162 ORTHO05D000090 1.3e-09 68.6 44 75.0
THA.LOC104807048 Tarenaya hassleriana HOM05D000162 ORTHO05D000090 3.0e-09 67.4 44 70.5
THA.LOC104811187 Tarenaya hassleriana HOM05D000162 ORTHO05D000090 5.1e-09 66.6 44 68.2
THA.LOC104806624 Tarenaya hassleriana HOM05D000162 ORTHO05D000090 8.7e-09 65.9 49 73.5
THA.LOC104806879 Tarenaya hassleriana HOM05D000162 ORTHO05D000090 8.7e-09 65.9 44 70.5
THA.LOC104806884 Tarenaya hassleriana HOM05D000162 ORTHO05D000090 8.7e-09 65.9 44 68.2
THA.LOC104814593 Tarenaya hassleriana HOM05D000162 ORTHO05D000090 8.7e-09 65.9 53 67.9
Thecc.05G196000 Theobroma cacao HOM05D000162 ORTHO05D000090 8.7e-09 65.9 44 65.9
THA.LOC104806600 Tarenaya hassleriana HOM05D000162 ORTHO05D000090 1.1e-08 65.5 38 84.2
THA.LOC104806886 Tarenaya hassleriana HOM05D000162 ORTHO05D000090 3.3e-08 63.9 44 65.9
THA.LOC109116387 Tarenaya hassleriana HOM05D000162 ORTHO05D000090 4.3e-08 63.5 44 70.5
Manes.09G011835 Manihot esculenta HOM05D000162 ORTHO05D000090 7.4e-08 62.8 43 65.1
THA.LOC104807047 Tarenaya hassleriana HOM05D000162 ORTHO05D000090 7.4e-08 62.8 44 61.4
THA.LOC104814143 Tarenaya hassleriana HOM05D000162 ORTHO05D000090 7.4e-08 62.8 44 70.5
THA.LOC104803570 Tarenaya hassleriana HOM05D000162 ORTHO05D000090 9.6e-08 62.4 41 68.3
THA.LOC104806534 Tarenaya hassleriana HOM05D000162 ORTHO05D000090 9.6e-08 62.4 43 65.1
THA.LOC104806937 Tarenaya hassleriana HOM05D000162 ORTHO05D000090 9.6e-08 62.4 44 68.2
Gohir.A04G034300 Gossypium hirsutum HOM05D000162 ORTHO05D000090 1.3e-07 62.0 44 59.1
Gorai.009G376400 Gossypium raimondii HOM05D000162 ORTHO05D000090 1.3e-07 62.0 44 59.1
THA.LOC104807046 Tarenaya hassleriana HOM05D000162 ORTHO05D000090 1.3e-07 62.0 44 68.2
THA.LOC109115971 Tarenaya hassleriana HOM05D000162 ORTHO05D000090 1.3e-07 62.0 44 59.1
Manes.09G011684 Manihot esculenta HOM05D000162 ORTHO05D000090 2.1e-07 61.2 44 61.4
Gorai.009G378500 Gossypium raimondii HOM05D000162 ORTHO05D000090 2.8e-07 60.8 44 59.1
Manes.07G071314 Manihot esculenta HOM05D000162 ORTHO05D000090 2.8e-07 60.8 43 62.8
Manes.09G011656 Manihot esculenta HOM05D000162 ORTHO05D000090 2.8e-07 60.8 43 62.8
Manes.09G011799 Manihot esculenta HOM05D000162 ORTHO05D000090 2.8e-07 60.8 43 62.8
Manes.09G014100 Manihot esculenta HOM05D000162 ORTHO05D000090 2.8e-07 60.8 43 62.8
THA.LOC104806940 Tarenaya hassleriana HOM05D000162 ORTHO05D000090 2.8e-07 60.8 44 65.9
Manes.09G011620 Manihot esculenta HOM05D000162 ORTHO05D000090 3.7e-07 60.5 44 61.4
Manes.09G011660 Manihot esculenta HOM05D000162 ORTHO05D000090 3.7e-07 60.5 43 62.8
Manes.09G011877 Manihot esculenta HOM05D000162 ORTHO05D000090 3.7e-07 60.5 43 62.8
Manes.09G015100 Manihot esculenta HOM05D000162 ORTHO05D000090 3.7e-07 60.5 43 62.8
AUR62005301 Chenopodium quinoa HOM05D000162 ORTHO05D000090 6.2e-07 59.7 44 61.4
Manes.07G067100 Manihot esculenta HOM05D000162 ORTHO05D000090 6.2e-07 59.7 43 60.5
Manes.07G067400 Manihot esculenta HOM05D000162 ORTHO05D000090 6.2e-07 59.7 43 60.5
Manes.07G067600 Manihot esculenta HOM05D000162 ORTHO05D000090 6.2e-07 59.7 43 60.5
Carub.0001s1249 Capsella rubella HOM05D000162 ORTHO05D000090 8.2e-07 59.3 44 56.8
Gohir.D10G131400 Gossypium hirsutum HOM05D000162 ORTHO05D000090 8.2e-07 59.3 43 62.8
Gorai.009G384100 Gossypium raimondii HOM05D000162 ORTHO05D000090 1.1e-06 58.9 44 56.8
Manes.07G067700 Manihot esculenta HOM05D000162 ORTHO05D000090 1.1e-06 58.9 43 60.5
Manes.09G011300 Manihot esculenta HOM05D000162 ORTHO05D000090 1.1e-06 58.9 43 60.5
Manes.09G011500 Manihot esculenta HOM05D000162 ORTHO05D000090 1.1e-06 58.9 43 60.5
Manes.09G011709 Manihot esculenta HOM05D000162 ORTHO05D000090 1.1e-06 58.9 43 60.5
Manes.09G011718 Manihot esculenta HOM05D000162 ORTHO05D000090 1.1e-06 58.9 43 60.5
Manes.09G011889 Manihot esculenta HOM05D000162 ORTHO05D000090 1.1e-06 58.9 39 69.2
Manes.09G011898 Manihot esculenta HOM05D000162 ORTHO05D000090 1.1e-06 58.9 43 60.5
Manes.09G011952 Manihot esculenta HOM05D000162 ORTHO05D000090 1.1e-06 58.9 43 60.5
Manes.09G011970 Manihot esculenta HOM05D000162 ORTHO05D000090 1.1e-06 58.9 43 60.5
Manes.09G016688 Manihot esculenta HOM05D000162 ORTHO05D000090 1.1e-06 58.9 39 69.2
Manes.09G016699 Manihot esculenta HOM05D000162 ORTHO05D000090 1.1e-06 58.9 43 60.5
Manes.09G016747 Manihot esculenta HOM05D000162 ORTHO05D000090 1.1e-06 58.9 39 69.2
Manes.09G016800 Manihot esculenta HOM05D000162 ORTHO05D000090 1.1e-06 58.9 43 60.5
Manes.09G016900 Manihot esculenta HOM05D000162 ORTHO05D000090 1.1e-06 58.9 43 60.5
Manes.09G017000 Manihot esculenta HOM05D000162 ORTHO05D000090 1.1e-06 58.9 43 60.5
Manes.09G017401 Manihot esculenta HOM05D000162 ORTHO05D000090 1.1e-06 58.9 43 60.5
THA.LOC109116384 Tarenaya hassleriana HOM05D000162 ORTHO05D000090 1.1e-06 58.9 42 64.3
BcaB08g34254 Brassica carinata HOM05D000162 ORTHO05D000090 1.4e-06 58.5 44 56.8
Gorai.011G145000 Gossypium raimondii HOM05D000162 ORTHO05D000090 1.4e-06 58.5 44 59.1
Manes.09G012500 Manihot esculenta HOM05D000162 ORTHO05D000090 1.4e-06 58.5 43 60.5
Manes.09G016633 Manihot esculenta HOM05D000162 ORTHO05D000090 1.4e-06 58.5 43 58.1
THA.LOC104806931 Tarenaya hassleriana HOM05D000162 ORTHO05D000090 1.4e-06 58.5 44 65.9
THA.LOC104806934 Tarenaya hassleriana HOM05D000162 ORTHO05D000090 1.4e-06 58.5 44 63.6
Gohir.A10G135300 Gossypium hirsutum HOM05D000162 ORTHO05D000090 1.8e-06 58.2 43 60.5
THA.LOC104814175 Tarenaya hassleriana HOM05D000162 ORTHO05D000090 1.8e-06 58.2 39 69.2
AL1G24080 Arabidopsis lyrata HOM05D000162 ORTHO05D000090 2.4e-06 57.8 44 54.5
Thhalv10007048m.g Eutrema salsugineum HOM05D000162 ORTHO05D000090 2.4e-06 57.8 43 53.5
Thhalv10007095m.g Eutrema salsugineum HOM05D000162 ORTHO05D000090 2.4e-06 57.8 43 53.5
Manes.09G011644 Manihot esculenta HOM05D000162 ORTHO05D000090 2.4e-06 57.8 43 58.1
Manes.09G011817 Manihot esculenta HOM05D000162 ORTHO05D000090 2.4e-06 57.8 43 58.1
Manes.09G012300 Manihot esculenta HOM05D000162 ORTHO05D000090 2.4e-06 57.8 43 58.1
Manes.09G016611 Manihot esculenta HOM05D000162 ORTHO05D000090 2.4e-06 57.8 43 58.1
Manes.09G016772 Manihot esculenta HOM05D000162 ORTHO05D000090 2.4e-06 57.8 43 60.5
Manes.09G018460 Manihot esculenta HOM05D000162 ORTHO05D000090 2.4e-06 57.8 43 60.5
Haze_13083 Corylus avellana HOM05D004838 ORTHO05D005373 3.1e-06 57.4 43 58.1
Gohir.D09G009700 Gossypium hirsutum HOM05D000162 ORTHO05D000090 3.1e-06 57.4 38 71.1
Manes.09G011672 Manihot esculenta HOM05D000162 ORTHO05D000090 3.1e-06 57.4 43 58.1
Manes.09G011676 Manihot esculenta HOM05D000162 ORTHO05D000090 3.1e-06 57.4 39 66.7
Manes.09G011680 Manihot esculenta HOM05D000162 ORTHO05D000090 3.1e-06 57.4 43 58.1
Manes.09G011736 Manihot esculenta HOM05D000162 ORTHO05D000090 3.1e-06 57.4 43 58.1
Manes.09G011790 Manihot esculenta HOM05D000162 ORTHO05D000090 3.1e-06 57.4 43 58.1
Manes.09G011902 Manihot esculenta HOM05D000162 ORTHO05D000090 3.1e-06 57.4 43 60.5
Manes.09G014741 Manihot esculenta HOM05D000162 ORTHO05D000090 3.1e-06 57.4 43 60.5
Manes.09G016655 Manihot esculenta HOM05D000162 ORTHO05D000090 3.1e-06 57.4 38 68.4
Manes.09G016744 Manihot esculenta HOM05D000162 ORTHO05D000090 3.1e-06 57.4 38 68.4
THA.LOC104806936 Tarenaya hassleriana HOM05D000162 ORTHO05D000090 3.1e-06 57.4 44 65.9
AUR62000652 Chenopodium quinoa HOM05D000162 ORTHO05D000090 4.0e-06 57.0 43 60.5
Gohir.A09G010600 Gossypium hirsutum HOM05D000162 ORTHO05D000090 4.0e-06 57.0 39 69.2
MD03G1103700 Malus domestica HOM05D000162 ORTHO05D000090 4.0e-06 57.0 44 56.8
Manes.09G011652 Manihot esculenta HOM05D000162 ORTHO05D000090 4.0e-06 57.0 44 56.8
Manes.09G018580 Manihot esculenta HOM05D000162 ORTHO05D000090 4.0e-06 57.0 44 56.8
Manes.13G006400 Manihot esculenta HOM05D000162 ORTHO05D000090 4.0e-06 57.0 43 60.5
AL1G23970 Arabidopsis lyrata HOM05D000162 ORTHO05D000090 5.3e-06 56.6 42 57.1
AL1G24070 Arabidopsis lyrata HOM05D000162 ORTHO05D000090 5.3e-06 56.6 44 54.5
Carub.0001s1230 Capsella rubella HOM05D000162 ORTHO05D000090 5.3e-06 56.6 44 54.5
CARHR013000 Cardamine hirsuta HOM05D000162 ORTHO05D000090 5.3e-06 56.6 44 54.5
Manes.09G011862 Manihot esculenta HOM05D000162 ORTHO05D000090 5.3e-06 56.6 39 64.1
Manes.09G011883 Manihot esculenta HOM05D000162 ORTHO05D000090 5.3e-06 56.6 39 64.1
Manes.09G014301 Manihot esculenta HOM05D000162 ORTHO05D000090 5.3e-06 56.6 40 62.5
AT1G64583 Arabidopsis thaliana HOM05D000162 ORTHO05D000090 6.9e-06 56.2 43 53.5
Gohir.A04G034500 Gossypium hirsutum HOM05D000162 ORTHO05D000090 6.9e-06 56.2 39 64.1
Gorai.009G378900 Gossypium raimondii HOM05D000162 ORTHO05D000090 6.9e-06 56.2 44 56.8
Manes.09G011608 Manihot esculenta HOM05D000162 ORTHO05D000090 6.9e-06 56.2 43 58.1
Manes.09G011640 Manihot esculenta HOM05D000162 ORTHO05D000090 6.9e-06 56.2 40 62.5
Manes.09G011688 Manihot esculenta HOM05D000162 ORTHO05D000090 6.9e-06 56.2 40 62.5
Manes.09G011934 Manihot esculenta HOM05D000162 ORTHO05D000090 6.9e-06 56.2 44 59.1
Manes.09G011961 Manihot esculenta HOM05D000162 ORTHO05D000090 6.9e-06 56.2 40 62.5
Manes.09G015250 Manihot esculenta HOM05D000162 ORTHO05D000090 6.9e-06 56.2 43 58.1
Manes.09G016753 Manihot esculenta HOM05D000162 ORTHO05D000090 6.9e-06 56.2 43 58.1
Manes.09G016762 Manihot esculenta HOM05D000162 ORTHO05D000090 6.9e-06 56.2 43 58.1
Hund21879 Selenicereus undatus HOM05D000031 ORTHO05D000030 6.9e-06 56.2 44 56.8
C08p46920 Brassica napus HOM05D004112 ORTHO05D004739 9.0e-06 55.8 44 52.3
Manes.09G016683 Manihot esculenta HOM05D000162 ORTHO05D000090 9.0e-06 55.8 38 65.8
Manes.09G017201 Manihot esculenta HOM05D000162 ORTHO05D000090 9.0e-06 55.8 43 58.1
Manes.12G004500 Manihot esculenta HOM05D000162 ORTHO05D000090 9.0e-06 55.8 43 55.8


User provided reference genes

Program Settings