Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
THA.LOC104804865 Tarenaya hassleriana HOM05D007490 ORTHO05D008750 2.0e-119 432.6 232 100.0
AT3G57440 Arabidopsis thaliana HOM05D007490 ORTHO05D008750 5.1e-43 178.7 233 52.8
CARHR167640 Cardamine hirsuta HOM05D007490 ORTHO05D008750 7.4e-42 174.9 233 51.9
AL5G39010 Arabidopsis lyrata HOM05D007490 ORTHO05D008750 3.7e-41 172.6 233 51.5
Carub.0005s2428 Capsella rubella HOM05D007490 ORTHO05D008750 3.7e-41 172.6 232 51.7
BraA09t40485Z Brassica rapa HOM05D014273 ORTHO05D008750 1.4e-40 170.6 216 51.9
Thhalv10006439m.g Eutrema salsugineum HOM05D007490 ORTHO05D008750 9.0e-40 167.9 234 50.0
Thhalv10017790m.g Eutrema salsugineum HOM05D007490 ORTHO05D008750 3.4e-39 166.0 204 54.9
A09p50330 Brassica napus HOM05D007490 ORTHO05D008750 5.8e-39 165.2 226 49.6
Sp5g05160 Schrenkiella parvula HOM05D007490 ORTHO05D008750 4.9e-38 162.2 232 48.7
THA.LOC104824305 Tarenaya hassleriana HOM05D007490 ORTHO05D008750 1.3e-35 154.1 135 68.9
BcaC07g40379 Brassica carinata HOM05D007490 ORTHO05D008750 6.2e-33 145.2 229 48.0
BcaNung06245 Brassica carinata HOM05D007490 ORTHO05D008750 3.4e-31 139.4 207 48.8
BolC3t15167H Brassica oleracea HOM05D007490 ORTHO05D008750 3.4e-31 139.4 207 48.8
C03p27950 Brassica napus HOM05D007490 ORTHO05D008750 7.6e-31 138.3 207 48.3
A03p23430 Brassica napus HOM05D007490 ORTHO05D008750 7.1e-29 131.7 209 47.8
BraA03t11560Z Brassica rapa HOM05D007490 ORTHO05D008750 7.1e-29 131.7 208 48.6
BcaC07g40383 Brassica carinata HOM05D007490 ORTHO05D008750 1.3e-27 127.5 226 45.6
BolC8t50896H Brassica oleracea HOM05D014273 ORTHO05D041832 1.3e-22 110.9 173 46.8
COL.COLO4_28277 Corchorus olitorius HOM05D007490 ORTHO05D008750 2.1e-20 103.6 227 39.6
Thecc.05G153900 Theobroma cacao HOM05D007490 ORTHO05D008750 2.7e-20 103.2 224 42.0
Manes.09G021650 Manihot esculenta HOM05D007490 ORTHO05D008750 1.9e-18 97.1 237 38.4
Duzib128G0116 Durio zibethinus HOM05D007490 ORTHO05D008750 2.5e-18 96.7 224 40.2
Atru.chr1.1094 Acer truncatum HOM05D007490 ORTHO05D008750 4.3e-18 95.9 230 40.0
Cpa.g.sc92.48 Carica papaya HOM05D007490 ORTHO05D008750 2.8e-17 93.2 216 39.8
Haze_19861 Corylus avellana HOM05D007490 ORTHO05D008750 6.3e-17 92.0 229 39.3
QL07p000297 Quercus lobata HOM05D007490 ORTHO05D008750 2.0e-15 87.0 246 36.6
CsaV3_4G011720 Cucumis sativus L. HOM05D007490 ORTHO05D008750 4.5e-15 85.9 226 38.1
Phvul.007G252900 Phaseolus vulgaris HOM05D007490 ORTHO05D008750 4.5e-15 85.9 236 36.0
VMungo0720G0884 Vigna mungo HOM05D007490 ORTHO05D008750 5.9e-15 85.5 233 36.1
Dinv39599 Davidia involucrata HOM05D007490 ORTHO05D008750 1.7e-14 84.0 227 35.7
Ciclev10005740m.g Citrus clementina HOM05D007490 ORTHO05D008750 2.9e-14 83.2 236 38.1
Gohir.A11G312500 Gossypium hirsutum HOM05D007490 ORTHO05D008750 5.0e-14 82.4 165 38.8
CANSAT80G2830 Cannabis sativa HOM05D007490 ORTHO05D008750 1.1e-13 81.3 245 33.9
CiPaw.09G038000 Carya illinoinensis HOM05D007490 ORTHO05D008750 1.1e-13 81.3 230 37.0
Rhsim03G0021300 Rhododendron simsii HOM05D007490 ORTHO05D008750 2.5e-13 80.1 185 36.2
Sed0009481 Sechium edule HOM05D007490 ORTHO05D008750 4.2e-13 79.3 258 33.7
Psat6g119920 Pisum sativum HOM05D007490 ORTHO05D008750 9.4e-13 78.2 233 33.5
Gohir.D11G329000 Gossypium hirsutum HOM05D007490 ORTHO05D008750 1.2e-12 77.8 165 38.2
Gorai.007G360400 Gossypium raimondii HOM05D007490 ORTHO05D008750 3.6e-12 76.3 165 37.6
ClCG00G005730 Citrullus lanatus HOM05D007490 ORTHO05D008750 3.0e-11 73.2 99 49.5
Duzib205G1398 Durio zibethinus HOM05D007490 ORTHO05D008750 6.7e-11 72.0 195 37.9
TAR636G1914 Trochodendron aralioides HOM05D007490 ORTHO05D008750 6.7e-11 72.0 159 37.7
Medtr0100s0190 Medicago truncatula HOM05D007490 ORTHO05D008750 8.8e-11 71.6 224 36.2
Rhsim03G0022200 Rhododendron simsii HOM05D007490 ORTHO05D008750 1.1e-10 71.2 204 31.9
Actinidia09331 Actinidia chinensis HOM05D007490 ORTHO05D008750 2.6e-10 70.1 217 37.3
C08p32920 Brassica napus HOM05D014273 ORTHO05D008750 2.6e-10 70.1 145 42.8
Sc13g0001780 Simmondsia chinensis HOM05D007490 ORTHO05D008750 2.6e-10 70.1 102 49.0
Eucgr.A02350 Eucalyptus grandis HOM05D007490 ORTHO05D008750 3.3e-10 69.7 140 37.9
MD12G1073500 Malus domestica HOM05D007490 ORTHO05D008750 7.4e-10 68.6 233 33.9
Potri.006G050900 Populus trichocarpa HOM05D007490 ORTHO05D008750 1.7e-09 67.4 175 35.4
FAN14G3182 Fragaria x ananassa HOM05D007490 ORTHO05D008750 2.8e-09 66.6 108 45.4
Actinidia39227 Actinidia chinensis HOM05D007490 ORTHO05D008750 4.8e-09 65.9 211 35.5
arahy.Tifrunner.gnm1.ann1.M65R33 Arachis hypogaea HOM05D007490 ORTHO05D008750 1.1e-08 64.7 256 31.2
FAN09G1636 Fragaria x ananassa HOM05D007490 ORTHO05D008750 1.1e-08 64.7 111 43.2
Nn7g36272 Nelumbo nucifera HOM05D007490 ORTHO05D008750 1.4e-08 64.3 180 31.7
PGR004G2251 Punica granatum HOM05D007490 ORTHO05D008750 1.4e-08 64.3 155 37.4
Sabra06G0035600 Salix brachista HOM05D007490 ORTHO05D008750 1.8e-08 63.9 218 33.0
TPR.G10631 Trifolium pratense HOM05D007490 ORTHO05D008750 1.8e-08 63.9 224 33.0
Glyma.02G183950 Glycine max HOM05D007490 ORTHO05D008750 3.1e-08 63.2 243 32.1
Oeu033005.1 Olea europaea HOM05D007490 ORTHO05D008750 3.1e-08 63.2 198 33.8
Sopen04g007810 Solanum pennellii HOM05D007490 ORTHO05D008750 3.1e-08 63.2 146 36.3
Hma1.2p1_2266F.1_g318420 Hydrangea macrophylla HOM05D007490 ORTHO05D008750 4.1e-08 62.8 163 35.6
Nitab4.5_0005611g0010 Nicotiana tabacum HOM05D007490 ORTHO05D008750 4.1e-08 62.8 131 38.2
Lsat_1_v5_gn_8_81320 Lactuca sativa HOM05D007490 ORTHO05D008750 5.3e-08 62.4 231 34.6
Ca_26016_v3 Cicer arietinum L. HOM05D007490 ORTHO05D008750 7.0e-08 62.0 229 32.3
DCAR_013600 Daucus carota HOM05D007490 ORTHO05D008750 7.0e-08 62.0 221 33.0
FvH4_6g23771 Fragaria vesca HOM05D007490 ORTHO05D008750 9.1e-08 61.6 201 32.8
RcHm_v2.0_Chr3g0482221 Rosa chinensis HOM05D007490 ORTHO05D008750 1.2e-07 61.2 62 53.2
PGSC0003DMG400027275 Solanum tuberosum HOM05D007490 ORTHO05D008750 1.5e-07 60.8 96 42.7
Lj5g0014197 Lotus japonicus HOM05D007490 ORTHO05D008750 2.0e-07 60.5 237 33.8
Lalb_Chr21g0316471 Lupinus albus HOM05D007490 ORTHO05D008750 2.0e-07 60.5 91 47.3
Prupe.7G061400 Prunus persica HOM05D007490 ORTHO05D008750 2.0e-07 60.5 238 29.4
FAN02G3575 Fragaria x ananassa HOM05D007490 ORTHO05D008750 2.6e-07 60.1 187 33.7
SGA_v2.0_scaffold273G46437 Striga asiatica HOM05D007490 ORTHO05D008750 2.6e-07 60.1 217 31.8
Ah.04g151770 Amaranthus hybridus HOM05D007490 ORTHO05D008750 3.4e-07 59.7 251 33.9
Aqoxy5G00272 Aquilegia oxysepala HOM05D007490 ORTHO05D008750 1.3e-06 57.8 86 41.9
Solyc04g015730.3 Solanum lycopersicum HOM05D007490 ORTHO05D008750 2.2e-06 57.0 146 34.9
Cc06_g17080 Coffea canephora HOM05D007490 ORTHO05D008750 3.8e-06 56.2 66 51.5
TWI74G0148 Tripterygium wilfordii HOM05D007490 ORTHO05D008750 3.8e-06 56.2 106 45.3
AUR62024445 Chenopodium quinoa HOM05D007490 ORTHO05D008750 5.0e-06 55.8 53 60.4
AUR62026035 Chenopodium quinoa HOM05D007490 ORTHO05D008750 5.0e-06 55.8 53 60.4
SGA_v2.0_scaffold94G28485 Striga asiatica HOM05D007490 ORTHO05D008750 5.0e-06 55.8 206 31.6


User provided reference genes

Program Settings