Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
THA.LOC104804597 Tarenaya hassleriana HOM05D005593 ORTHO05D006515 0.0e+00 1313.9 694 100.0
AL3G40252 Arabidopsis lyrata HOM05D005593 ORTHO05D006515 3.7e-129 466.5 765 47.1
Carub.0003s2504 Capsella rubella HOM05D005593 ORTHO05D006515 1.8e-128 464.2 775 45.8
AT3G24630 Arabidopsis thaliana HOM05D005593 ORTHO05D006515 7.6e-127 458.8 761 46.0
BcaB06g26676 Brassica carinata HOM05D005593 ORTHO05D006515 1.2e-124 451.4 767 45.1
Sp3g22410 Schrenkiella parvula HOM05D005593 ORTHO05D006515 1.8e-123 447.6 775 44.9
A07p07590 Brassica napus HOM05D005593 ORTHO05D006515 2.2e-121 440.7 758 45.0
BraA07t28551Z Brassica rapa HOM05D005593 ORTHO05D006515 3.7e-121 439.9 758 44.9
BcaC06g35744 Brassica carinata HOM05D005593 ORTHO05D006515 8.8e-115 418.7 766 43.2
C07p11350 Brassica napus HOM05D005593 ORTHO05D006515 2.5e-114 417.2 766 43.1
Thhalv10002425m.g Eutrema salsugineum HOM05D005593 ORTHO05D006515 1.3e-113 414.8 740 44.1
BolC7t41613H Brassica oleracea HOM05D005593 ORTHO05D006515 2.2e-113 414.1 770 42.9
CARHR100960 Cardamine hirsuta HOM05D005593 ORTHO05D006515 1.8e-112 411.0 749 43.7
Aa31sc586G30 Aethionema arabicum HOM05D005593 ORTHO05D006515 7.7e-111 405.6 722 43.2
Ciclev10007444m.g Citrus clementina HOM05D005593 ORTHO05D006515 7.0e-56 223.0 860 33.3
Prupe.7G233100 Prunus persica HOM05D005593 ORTHO05D006515 1.1e-53 215.7 864 30.4
BolC7t41614H Brassica oleracea HOM05D005593 ORTHO05D006515 2.5e-53 214.5 343 47.2
Thecc.09G108000 Theobroma cacao HOM05D005593 ORTHO05D006515 3.3e-53 214.2 878 29.0
Cfa003241 Carpinus fangiana HOM05D005593 ORTHO05D006515 1.6e-52 211.8 852 29.7
Cpa.g.sc23.90 Carica papaya HOM05D005593 ORTHO05D006515 3.1e-51 207.6 900 28.7
Dinv41619 Davidia involucrata HOM05D005593 ORTHO05D006515 6.8e-51 206.5 893 29.2
Gorai.010G072700 Gossypium raimondii HOM05D005593 ORTHO05D006515 8.3e-49 199.5 908 28.7
Gohir.A06G063700 Gossypium hirsutum HOM05D005593 ORTHO05D006515 2.7e-47 194.5 932 28.5
Gohir.D06G062400 Gossypium hirsutum HOM05D005593 ORTHO05D006515 3.5e-47 194.1 916 28.4
TAR383G0262 Trochodendron aralioides HOM05D005593 ORTHO05D006515 3.5e-47 194.1 889 29.6
CiPaw.04G162900 Carya illinoinensis HOM05D005593 ORTHO05D006515 4.6e-47 193.7 854 30.0
TWI63G0748 Tripterygium wilfordii HOM05D005593 ORTHO05D006515 8.6e-46 189.5 908 27.5
Duzib150G1551 Durio zibethinus HOM05D005593 ORTHO05D006515 2.5e-45 188.0 891 28.7
Gohir.D07G006300 Gossypium hirsutum HOM05D005593 ORTHO05D006515 3.3e-45 187.6 790 30.5
Haze_25764 Corylus avellana HOM05D005593 ORTHO05D006515 8.1e-44 183.0 870 28.4
RcHm_v2.0_Chr2g0090061 Rosa chinensis HOM05D005593 ORTHO05D006515 2.4e-43 181.4 879 28.9
Gorai.001G005900 Gossypium raimondii HOM05D005593 ORTHO05D006515 5.2e-43 180.3 790 30.1
arahy.Tifrunner.gnm1.ann1.F0KYD5 Arachis hypogaea HOM05D005593 ORTHO05D006515 6.8e-43 179.9 816 28.1
FAN23G2457 Fragaria x ananassa HOM05D005593 ORTHO05D006515 1.5e-42 178.7 856 29.7
Glyma.07G084900 Glycine max HOM05D005593 ORTHO05D006515 2.0e-42 178.3 859 29.5
Dinv36648 Davidia involucrata HOM05D005593 ORTHO05D006515 7.6e-42 176.4 884 29.0
Duzib187G0236 Durio zibethinus HOM05D005593 ORTHO05D006515 7.6e-42 176.4 920 28.0
FAN19G1075 Fragaria x ananassa HOM05D005593 ORTHO05D006515 2.9e-41 174.5 860 29.4
Lalb_Chr14g0371581 Lupinus albus HOM05D005593 ORTHO05D006515 2.4e-40 171.4 842 28.3
Nn2g11698 Nelumbo nucifera HOM05D005593 ORTHO05D006515 3.2e-40 171.0 893 27.9
Nn3g18070 Nelumbo nucifera HOM05D005593 ORTHO05D006515 4.2e-40 170.6 894 27.1
VMungo0464G1894 Vigna mungo HOM05D005593 ORTHO05D006515 1.0e-38 166.0 854 28.1
Manes.03G022200 Manihot esculenta HOM05D005593 ORTHO05D006515 1.3e-38 165.6 890 26.6
TWI34G0806 Tripterygium wilfordii HOM05D005593 ORTHO05D006515 1.3e-38 165.6 559 34.0
Sabra18G0070100 Salix brachista HOM05D005593 ORTHO05D006515 3.0e-38 164.5 875 27.4
Peaxi162Scf00207g01317 Petunia axillaris HOM05D005593 ORTHO05D006515 3.9e-38 164.1 819 26.9
Phvul.004G165100 Phaseolus vulgaris HOM05D005593 ORTHO05D006515 5.1e-38 163.7 845 27.6
FAN26G1119 Fragaria x ananassa HOM05D005593 ORTHO05D006515 6.6e-38 163.3 876 28.9
Manes.16G114300 Manihot esculenta HOM05D005593 ORTHO05D006515 8.7e-38 162.9 900 27.1
FAN28G0021 Fragaria x ananassa HOM05D005593 ORTHO05D006515 1.5e-37 162.2 861 29.0
Lalb_Chr22g0352731 Lupinus albus HOM05D005593 ORTHO05D006515 4.3e-37 160.6 844 26.7
Aqoxy7G01612 Aquilegia oxysepala HOM05D005593 ORTHO05D006515 5.6e-37 160.2 877 25.8
Psat1g043640 Pisum sativum HOM05D005593 ORTHO05D006515 7.3e-37 159.8 840 30.0
CiPaw.03G229900 Carya illinoinensis HOM05D005593 ORTHO05D006515 9.6e-37 159.5 836 27.8
HanXRQChr12g0355541 Helianthus annuus HOM05D000246 ORTHO05D008363 9.6e-37 159.5 734 28.9
Glyma.09G192000 Glycine max HOM05D005593 ORTHO05D006515 1.2e-36 159.1 858 28.2
QL02p043456 Quercus lobata HOM05D005593 ORTHO05D006515 2.8e-36 157.9 818 29.5
CSS0038657 Camellia sinensis var. sinensis HOM05D005593 ORTHO05D006515 6.2e-36 156.8 866 26.8
QL02p044157 Quercus lobata HOM05D005593 ORTHO05D006515 8.1e-36 156.4 869 27.8
Nitab4.5_0000097g0120 Nicotiana tabacum HOM05D005593 ORTHO05D006515 3.1e-35 154.5 945 25.1
Ca_25537_v3 Cicer arietinum L. HOM05D005593 ORTHO05D006515 4.0e-35 154.1 833 27.3
Potri.018G082300 Populus trichocarpa HOM05D005593 ORTHO05D006515 6.9e-35 153.3 909 26.8
CANSAT56G2752 Cannabis sativa HOM05D005593 ORTHO05D006515 9.0e-35 152.9 903 27.2
CSS0003686 Camellia sinensis var. sinensis HOM05D005593 ORTHO05D006515 3.4e-34 151.0 937 26.1
PSO832G1383 Papaver somniferum HOM05D005593 ORTHO05D006515 5.8e-34 150.2 925 26.2
Cc06_g09850 Coffea canephora HOM05D005593 ORTHO05D006515 1.3e-33 149.1 887 26.9
Peaxi162Scf00231g00216 Petunia axillaris HOM05D005593 ORTHO05D006515 2.2e-33 148.3 901 26.7
TPR.G10037 Trifolium pratense HOM05D005593 ORTHO05D006515 4.9e-33 147.1 832 27.5
ECA234G4430 Erigeron canadensis HOM05D005593 ORTHO05D006515 6.4e-33 146.7 767 28.0
Medtr6g087760 Medicago truncatula HOM05D005593 ORTHO05D006515 1.1e-32 146.0 857 28.0
Oeu064588.2 Olea europaea HOM05D005593 ORTHO05D006515 7.1e-32 143.3 891 26.8
PGR142G3553 Punica granatum HOM05D005593 ORTHO05D006515 9.3e-32 142.9 838 27.7
Phvul.002G312500 Phaseolus vulgaris HOM05D005593 ORTHO05D006515 4.6e-31 140.6 823 26.0
MD15G1182400 Malus domestica HOM05D005593 ORTHO05D006515 6.0e-31 140.2 823 27.6
VMungo0251G1265 Vigna mungo HOM05D005593 ORTHO05D006515 7.8e-31 139.8 805 26.1
Nitab4.5_0013892g0010 Nicotiana tabacum HOM05D005593 ORTHO05D006515 1.3e-30 139.0 944 26.1
Sc08g0007580 Simmondsia chinensis HOM05D005593 ORTHO05D006515 1.1e-29 136.0 837 25.9
PGSC0003DMG400015636 Solanum tuberosum HOM05D005593 ORTHO05D006515 1.1e-29 136.0 293 35.8
Lj2g0010013 Lotus japonicus HOM05D005593 ORTHO05D006515 5.6e-29 133.7 846 27.8
MSTRG.19579 Avicennia marina HOM05D005593 ORTHO05D006515 9.6e-29 132.9 828 27.1
Sed0013092 Sechium edule HOM05D005593 ORTHO05D006515 2.8e-28 131.3 810 25.8
PSO782G3244 Papaver somniferum HOM05D005593 ORTHO05D006515 1.1e-27 129.4 939 25.3
Dinv11466 Davidia involucrata HOM05D005593 ORTHO05D006515 1.4e-27 129.0 269 38.3
vmacro20713 Vaccinium macrocarpon HOM05D005593 ORTHO05D006515 2.4e-27 128.3 1011 24.3
DCAR_012067 Daucus carota HOM05D005593 ORTHO05D006515 4.5e-26 124.0 900 26.2
GSVIVG01015371001 Vitis vinifera HOM05D005593 ORTHO05D006515 4.5e-26 124.0 698 26.6
Ah.14g082180 Amaranthus hybridus HOM05D005593 ORTHO05D006515 9.9e-26 122.9 854 24.8
ClCG11G002410 Citrullus lanatus HOM05D005593 ORTHO05D006515 9.9e-26 122.9 273 35.5
Glyma.08G037800 Glycine max HOM05D005593 ORTHO05D006515 2.9e-25 121.3 773 26.3
Sopen07g016890 Solanum pennellii HOM05D005593 ORTHO05D006515 2.4e-24 118.2 872 23.9
Solyc07g032710.4 Solanum lycopersicum HOM05D005593 ORTHO05D006515 5.4e-24 117.1 872 24.4
EL10Ac8g18455 Beta vulgaris HOM05D005593 ORTHO05D006515 9.3e-24 116.3 879 25.3
Lsat_1_v5_gn_5_103481 Lactuca sativa HOM05D005593 ORTHO05D006515 9.3e-24 116.3 744 27.3
SalBow6G5362 Salvia bowleyana HOM05D005593 ORTHO05D006515 9.3e-24 116.3 791 27.2
Nitab4.5_0009314g0010 Nicotiana tabacum HOM05D005593 ORTHO05D006515 1.2e-23 115.9 846 24.9
Peaxi162Scf01363g00023 Petunia axillaris HOM05D005593 ORTHO05D006515 1.6e-23 115.5 863 24.6
MELO3C004562.2 Cucumis melo HOM05D005593 ORTHO05D006515 2.7e-23 114.8 267 32.6
CsaV3_2G002210 Cucumis sativus L. HOM05D005593 ORTHO05D006515 3.5e-23 114.4 269 32.7
Glyma.05G230300 Glycine max HOM05D005593 ORTHO05D006515 6.0e-23 113.6 745 25.6
Lj7E653T1 Lonicera japonica HOM05D005593 ORTHO05D006515 1.0e-22 112.8 142 44.4
Rhsim01G0100000 Rhododendron simsii HOM05D005593 ORTHO05D006515 1.3e-22 112.5 195 39.0
PGSC0003DMG400000308 Solanum tuberosum HOM05D005593 ORTHO05D006515 2.5e-21 108.2 811 24.5
AUR62010967 Chenopodium quinoa HOM05D005593 ORTHO05D006515 2.1e-20 105.1 874 24.6
AUR62021477 Chenopodium quinoa HOM05D005593 ORTHO05D006515 2.8e-20 104.8 875 25.0
Sopen12g003130 Solanum pennellii HOM05D005593 ORTHO05D006515 3.1e-19 101.3 809 25.1
Rhsim01G0098000 Rhododendron simsii HOM05D005593 ORTHO05D006515 4.0e-19 100.9 168 38.7
ClCG06G008720 Citrullus lanatus HOM05D005593 ORTHO05D006515 2.6e-18 98.2 842 23.6
Nitab4.5_0002904g0040 Nicotiana tabacum HOM05D005593 ORTHO05D006515 2.5e-16 91.7 828 24.9
TWI34G0072 Tripterygium wilfordii HOM05D005593 ORTHO05D006515 4.6e-15 87.4 225 28.9
Sed0026051 Sechium edule HOM05D005593 ORTHO05D006515 7.9e-15 86.7 446 26.2
Eucgr.C01030 Eucalyptus grandis HOM05D005593 ORTHO05D006515 1.3e-14 85.9 183 31.1
MELO3C024628.2 Cucumis melo HOM05D005593 ORTHO05D006515 3.9e-14 84.3 815 24.2
Gohir.A07G005700 Gossypium hirsutum HOM05D005593 ORTHO05D006515 1.1e-13 82.8 473 28.5
ATR0315G161 Amborella trichopoda HOM05D005593 ORTHO05D006515 2.5e-13 81.6 296 27.7
Ah.09g231030 Amaranthus hybridus HOM05D005593 ORTHO05D006515 1.6e-12 79.0 826 23.6
CsaV3_1G024390 Cucumis sativus L. HOM05D005593 ORTHO05D006515 2.1e-12 78.6 765 24.6
Hund09124 Selenicereus undatus HOM05D005593 ORTHO05D006515 8.2e-12 76.6 930 23.8
MBI04_g19171_MAGBIO Magnolia biondii HOM05D005593 ORTHO05D006515 1.4e-11 75.9 189 32.8
Rhsim01G0099500 Rhododendron simsii HOM05D005593 ORTHO05D006515 1.8e-11 75.5 200 31.5
Sed0018005 Sechium edule HOM05D005593 ORTHO05D006515 4.0e-11 74.3 751 24.8
Solyc12g007140.3 Solanum lycopersicum HOM05D005593 ORTHO05D006515 5.8e-10 70.5 710 24.2
CSS0008305 Camellia sinensis var. sinensis HOM05D005593 ORTHO05D006515 1.7e-09 68.9 188 30.3
arahy.Tifrunner.gnm1.ann1.31F9U3 Arachis hypogaea HOM05D005593 ORTHO05D006515 2.2e-09 68.6 350 26.0
HPP92_023915 Vanilla planifolia HOM05D005593 ORTHO05D006515 1.1e-08 66.2 193 33.2
Hund09560 Selenicereus undatus HOM05D005593 ORTHO05D006515 2.5e-08 65.1 915 22.8
Rhsim01G0099800 Rhododendron simsii HOM05D005593 ORTHO05D006515 1.2e-07 62.8 141 41.8
Ciclev10018661m.g Citrus clementina HOM05D006788 ORTHO05D008265 2.7e-07 61.6 201 31.8
HPP92_023948 Vanilla planifolia HOM05D005593 ORTHO05D006515 4.6e-07 60.8 672 24.0
COL.COLO4_34842 Corchorus olitorius HOM05D005593 ORTHO05D006515 6.0e-07 60.5 699 23.5
AL2G22900 Arabidopsis lyrata HOM05D005593 ORTHO05D002225 7.9e-07 60.1 32 81.2
Migut.N00496 Erythranthe guttata HOM05D006788 ORTHO05D008265 1.0e-06 59.7 753 21.4
DCAR_028703 Daucus carota HOM05D005593 ORTHO05D006515 1.8e-06 58.9 656 25.0
Atru.chr13.488 Acer truncatum HOM05D006788 ORTHO05D008265 3.0e-06 58.2 246 27.2


User provided reference genes

Program Settings