Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
THA.LOC104804567 Tarenaya hassleriana HOM05D005697 ORTHO05D006951 8.6e-106 387.1 212 100.0
THA.LOC104808734 Tarenaya hassleriana HOM05D005697 ORTHO05D006951 3.4e-70 268.9 211 74.4
Carub.0007s2900 Capsella rubella HOM05D005697 ORTHO05D006951 3.2e-52 209.1 208 62.0
CARHR219170 Cardamine hirsuta HOM05D005697 ORTHO05D006951 1.2e-51 207.2 216 61.1
Aa31LG9G4120 Aethionema arabicum HOM05D005697 ORTHO05D006951 6.1e-51 204.9 207 61.4
BcaC02g09418 Brassica carinata HOM05D005697 ORTHO05D006951 1.4e-50 203.8 217 59.4
BolC4t25821H Brassica oleracea HOM05D005697 ORTHO05D006951 1.4e-50 203.8 217 59.4
THA.LOC104821627 Tarenaya hassleriana HOM05D005697 ORTHO05D006951 6.7e-50 201.4 211 61.1
C04p42400 Brassica napus HOM05D005697 ORTHO05D006951 8.8e-50 201.1 209 59.8
AT4G13540 Arabidopsis thaliana HOM05D005697 ORTHO05D006951 1.5e-49 200.3 208 60.1
Sp7g11140 Schrenkiella parvula HOM05D005697 ORTHO05D006951 1.3e-48 197.2 216 59.3
A04p08640 Brassica napus HOM05D005697 ORTHO05D006951 2.8e-48 196.1 195 61.5
BcaB03g16086 Brassica carinata HOM05D005697 ORTHO05D006951 1.4e-44 183.7 218 56.4
Thhalv10026312m.g Eutrema salsugineum HOM05D005697 ORTHO05D006951 1.4e-44 183.7 181 61.9
AL7G43130 Arabidopsis lyrata HOM05D005697 ORTHO05D006951 4.7e-43 178.7 209 56.9
BraA07t28595Z Brassica rapa HOM05D005697 ORTHO05D006951 1.8e-42 176.8 227 53.3
BcaB06g26605 Brassica carinata HOM05D005697 ORTHO05D006951 5.1e-42 175.3 227 53.3
BcaC06g35669 Brassica carinata HOM05D005697 ORTHO05D006951 2.2e-40 169.9 227 52.4
C07p12260 Brassica napus HOM05D005697 ORTHO05D006951 2.2e-40 169.9 227 52.4
BolC7t41693H Brassica oleracea HOM05D005697 ORTHO05D006951 2.2e-40 169.9 227 52.4
A07p08110 Brassica napus HOM05D005697 ORTHO05D006951 2.0e-38 163.3 229 51.5
Thhalv10002645m.g Eutrema salsugineum HOM05D005697 ORTHO05D006951 3.8e-37 159.1 224 51.8
CARHR100340 Cardamine hirsuta HOM05D005697 ORTHO05D006951 3.0e-34 149.4 228 47.4
Sp3g22030 Schrenkiella parvula HOM05D005697 ORTHO05D006951 1.1e-33 147.5 230 49.1
Aa31LG8G10940 Aethionema arabicum HOM05D005697 ORTHO05D006951 3.3e-33 146.0 216 48.1
CiPaw.01G174800 Carya illinoinensis HOM05D005697 ORTHO05D006951 4.1e-31 139.0 217 47.9
Cpa.g.sc59.48 Carica papaya HOM05D005697 ORTHO05D006951 1.3e-29 134.0 253 44.3
CiPaw.02G104000 Carya illinoinensis HOM05D005697 ORTHO05D006951 6.5e-29 131.7 170 52.9
AUR62035343 Chenopodium quinoa HOM05D005697 ORTHO05D006951 4.2e-28 129.0 181 48.6
AT3G23930 Arabidopsis thaliana HOM05D005697 ORTHO05D006951 5.5e-28 128.6 226 46.0
Carub.0003s2459 Capsella rubella HOM05D005697 ORTHO05D006951 1.6e-27 127.1 140 55.7
Rhsim02G0049300 Rhododendron simsii HOM05D005697 ORTHO05D006951 2.7e-27 126.3 185 50.8
QL06p022167 Quercus lobata HOM05D005697 ORTHO05D006951 6.1e-27 125.2 171 50.9
BraA04t16558Z Brassica rapa HOM05D005697 ORTHO05D006951 1.0e-26 124.4 133 54.1
Duzib212G0179 Durio zibethinus HOM05D005697 ORTHO05D006951 1.4e-26 124.0 182 47.8
Eucgr.H02876 Eucalyptus grandis HOM05D005697 ORTHO05D006951 2.3e-26 123.2 178 50.6
RcHm_v2.0_Chr4g0396171 Rosa chinensis HOM05D005697 ORTHO05D006951 2.3e-26 123.2 193 46.6
AL3G39620 Arabidopsis lyrata HOM05D005697 ORTHO05D006951 3.0e-26 122.9 140 52.1
vmacro15494 Vaccinium macrocarpon HOM05D005697 ORTHO05D006951 3.0e-26 122.9 192 48.4
Duzib151G0493 Durio zibethinus HOM05D005697 ORTHO05D006951 5.2e-26 122.1 190 45.8
Haze_11522 Corylus avellana HOM05D005697 ORTHO05D006951 1.2e-25 120.9 193 49.2
Prupe.1G054100 Prunus persica HOM05D005697 ORTHO05D006951 1.2e-25 120.9 218 43.1
arahy.Tifrunner.gnm1.ann1.BKX7X4 Arachis hypogaea HOM05D005697 ORTHO05D006951 1.5e-25 120.6 187 46.5
Haze_11516 Corylus avellana HOM05D005697 ORTHO05D006951 2.6e-25 119.8 193 48.7
FvH4_4g05260 Fragaria vesca HOM05D005697 ORTHO05D006951 2.6e-25 119.8 195 46.2
FAN07G2767 Fragaria x ananassa HOM05D005697 ORTHO05D006951 2.6e-25 119.8 195 46.2
Thecc.04G218700 Theobroma cacao HOM05D005697 ORTHO05D006951 3.4e-25 119.4 192 48.4
FAN12G1366 Fragaria x ananassa HOM05D005697 ORTHO05D006951 4.4e-25 119.0 195 46.2
Gorai.006G218600 Gossypium raimondii HOM05D005697 ORTHO05D006951 4.4e-25 119.0 185 47.0
arahy.Tifrunner.gnm1.ann1.1SMG72 Arachis hypogaea HOM05D005697 ORTHO05D006951 5.7e-25 118.6 193 44.0
FAN22G1047 Fragaria x ananassa HOM05D005697 ORTHO05D006951 5.7e-25 118.6 195 45.6
Glyma.10G130200 Glycine max HOM05D005697 ORTHO05D006951 5.7e-25 118.6 185 47.0
Gohir.D09G195200 Gossypium hirsutum HOM05D005697 ORTHO05D006951 5.7e-25 118.6 185 47.0
MD13G1226700 Malus domestica HOM05D005697 ORTHO05D006951 5.7e-25 118.6 232 42.2
TWI09G0842 Tripterygium wilfordii HOM05D005697 ORTHO05D006951 5.7e-25 118.6 181 45.3
Glyma.20G081000 Glycine max HOM05D005697 ORTHO05D006951 7.5e-25 118.2 185 46.5
Sabra10G0044100 Salix brachista HOM05D005697 ORTHO05D006951 9.8e-25 117.9 175 48.6
FAN17G2424 Fragaria x ananassa HOM05D005697 ORTHO05D006951 1.3e-24 117.5 195 45.6
Nn1g03052 Nelumbo nucifera HOM05D005697 ORTHO05D006951 2.8e-24 116.3 178 46.6
Cfa014837 Carpinus fangiana HOM05D005697 ORTHO05D006951 6.3e-24 115.2 190 47.4
AUR62035897 Chenopodium quinoa HOM05D005697 ORTHO05D006951 6.3e-24 115.2 216 40.7
TPR.G23989 Trifolium pratense HOM05D005697 ORTHO05D006951 1.1e-23 114.4 187 44.9
Hund24861 Selenicereus undatus HOM05D005697 ORTHO05D006951 3.1e-23 112.8 188 44.1
Potri.010G062600 Populus trichocarpa HOM05D005697 ORTHO05D006951 4.1e-23 112.5 188 44.1
TWI53G2060 Tripterygium wilfordii HOM05D005697 ORTHO05D006951 5.4e-23 112.1 186 44.1
ECA233G3140 Erigeron canadensis HOM05D005697 ORTHO05D006951 9.1e-23 111.3 189 46.0
VMungo0720G1671 Vigna mungo HOM05D005697 ORTHO05D006951 1.6e-22 110.5 188 44.7
COL.COLO4_07143 Corchorus olitorius HOM05D005697 ORTHO05D006951 2.0e-22 110.2 191 44.5
CANSAT78G1745 Cannabis sativa HOM05D005697 ORTHO05D006951 2.7e-22 109.8 213 39.9
Sed0003887 Sechium edule HOM05D005697 ORTHO05D006951 4.5e-22 109.0 160 46.9
Manes.03G155600 Manihot esculenta HOM05D005697 ORTHO05D006951 1.3e-21 107.5 176 44.3
Atru.chr4.1856 Acer truncatum HOM05D005697 ORTHO05D006951 1.7e-21 107.1 206 42.2
Sabra08G0132900 Salix brachista HOM05D005697 ORTHO05D006951 2.2e-21 106.7 204 40.7
Cc03_g06970 Coffea canephora HOM05D005697 ORTHO05D006951 2.9e-21 106.3 181 43.6
Potri.008G174400 Populus trichocarpa HOM05D005697 ORTHO05D006951 3.8e-21 105.9 218 40.8
Sc19g0005740 Simmondsia chinensis HOM05D005697 ORTHO05D006951 3.8e-21 105.9 153 48.4
GSVIVG01001870001 Vitis vinifera HOM05D005697 ORTHO05D006951 6.5e-21 105.1 117 57.3
Dinv27139 Davidia involucrata HOM05D005697 ORTHO05D006951 8.5e-21 104.8 185 43.2
MBI07_g15425_MAGBIO Magnolia biondii HOM05D005697 ORTHO05D006951 2.5e-20 103.2 188 42.6
Nitab4.5_0002738g0060 Nicotiana tabacum HOM05D005697 ORTHO05D006951 3.2e-20 102.8 178 43.8
MSTRG.24645 Avicennia marina HOM05D005697 ORTHO05D006951 4.2e-20 102.4 200 43.0
SalBow3G3550 Salvia bowleyana HOM05D005697 ORTHO05D006951 7.2e-20 101.7 173 43.4
Ciclev10005805m.g Citrus clementina HOM05D005697 ORTHO05D006951 9.4e-20 101.3 130 49.2
CsaV3_1G001240 Cucumis sativus L. HOM05D005697 ORTHO05D006951 9.4e-20 101.3 208 41.8
Lalb_Chr19g0128591 Lupinus albus HOM05D005697 ORTHO05D006951 9.4e-20 101.3 186 43.0
Peaxi162Scf01007g00013 Petunia axillaris HOM05D005697 ORTHO05D006951 9.4e-20 101.3 194 40.2
EL10Ac3g06730 Beta vulgaris HOM05D005697 ORTHO05D006951 2.7e-19 99.8 200 40.0
TAR365G1050 Trochodendron aralioides HOM05D005697 ORTHO05D006951 2.7e-19 99.8 189 40.2
Gohir.A09G201000 Gossypium hirsutum HOM05D005697 ORTHO05D006951 3.6e-19 99.4 181 42.5
Lsat_1_v5_gn_6_67840 Lactuca sativa HOM05D005697 ORTHO05D006951 4.7e-19 99.0 190 40.0
SalBow3G1865 Salvia bowleyana HOM05D005697 ORTHO05D006951 4.7e-19 99.0 169 43.8
ClCG06G017260 Citrullus lanatus HOM05D005697 ORTHO05D006951 8.0e-19 98.2 180 44.4
Sed0013611 Sechium edule HOM05D005697 ORTHO05D006951 8.0e-19 98.2 174 44.8
Lalb_Chr03g0036851 Lupinus albus HOM05D005697 ORTHO05D006951 1.8e-18 97.1 183 42.1
Medtr1g046070 Medicago truncatula HOM05D005697 ORTHO05D006951 1.8e-18 97.1 193 41.5
TAR362G0923 Trochodendron aralioides HOM05D005697 ORTHO05D006951 1.8e-18 97.1 169 43.8
PGSC0003DMG400008629 Solanum tuberosum HOM05D005697 ORTHO05D006951 2.3e-18 96.7 176 41.5
Actinidia11384 Actinidia chinensis HOM05D005697 ORTHO05D006951 3.0e-18 96.3 96 58.3
CSS0038279 Camellia sinensis var. sinensis HOM05D005697 ORTHO05D006951 3.0e-18 96.3 211 38.4
Solyc12g097060.1 Solanum lycopersicum HOM05D005697 ORTHO05D006951 5.2e-18 95.5 190 42.1
Nitab4.5_0001998g0050 Nicotiana tabacum HOM05D005697 ORTHO05D006951 2.0e-17 93.6 177 42.9
Phvul.007G233100 Phaseolus vulgaris HOM05D005697 ORTHO05D006951 3.4e-17 92.8 188 40.4
MSTRG.21934 Avicennia marina HOM05D005697 ORTHO05D006951 2.2e-16 90.1 185 40.5
Oeu008818.1 Olea europaea HOM05D005697 ORTHO05D006951 2.8e-16 89.7 212 37.7
Solyc09g091060.3 Solanum lycopersicum HOM05D005697 ORTHO05D006951 2.8e-16 89.7 189 39.2
Nn3g19835 Nelumbo nucifera HOM05D005697 ORTHO05D006951 4.9e-16 89.0 214 36.0
PSO063G5372 Papaver somniferum HOM05D005697 ORTHO05D006951 8.3e-16 88.2 200 39.0
Manes.15G047800 Manihot esculenta HOM05D005697 ORTHO05D006951 1.1e-15 87.8 192 39.6
CAN.G566.3 Capsicum annuum HOM05D005697 ORTHO05D006951 1.8e-15 87.0 105 53.3
Oeu007537.1 Olea europaea HOM05D005697 ORTHO05D006951 2.4e-15 86.7 196 38.3
PSO339G1845 Papaver somniferum HOM05D005697 ORTHO05D006951 2.4e-15 86.7 200 39.0
Psat6g106680 Pisum sativum HOM05D005697 ORTHO05D006951 2.4e-15 86.7 103 50.5
CDE05G2497 Ceratophyllum demersum HOM05D005697 ORTHO05D006951 5.4e-15 85.5 113 49.6
Ah.13g075010 Amaranthus hybridus HOM05D005697 ORTHO05D006951 1.6e-14 84.0 213 37.6
Lj6g0023034 Lotus japonicus HOM05D005697 ORTHO05D006951 2.0e-14 83.6 149 44.3
CDE02G0931 Ceratophyllum demersum HOM05D005697 ORTHO05D006951 4.5e-14 82.4 182 38.5
DCAR_024305 Daucus carota HOM05D005697 ORTHO05D006951 5.9e-14 82.0 227 33.9
Actinidia39942 Actinidia chinensis HOM05D005697 ORTHO05D006951 7.7e-14 81.6 135 48.9
MELO3C026270.2 Cucumis melo HOM05D005697 ORTHO05D006951 7.7e-14 81.6 223 36.8
Peaxi162Scf00125g01016 Petunia axillaris HOM05D005697 ORTHO05D006951 7.7e-14 81.6 128 44.5
CAN.G812.40 Capsicum annuum HOM05D005697 ORTHO05D006951 1.3e-13 80.9 186 37.6
Migut.N00325 Erythranthe guttata HOM05D005697 ORTHO05D006951 2.3e-13 80.1 164 40.2
BcaC01g03341 Brassica carinata HOM05D005697 ORTHO05D006951 1.5e-12 77.4 210 39.0
Sopen09g034040 Solanum pennellii HOM05D005697 ORTHO05D006951 1.5e-12 77.4 189 36.0
Glyma.14G108200 Glycine max HOM05D005697 ORTHO05D006951 4.7e-11 72.4 106 45.3
SGA_v2.0_scaffold31G12607 Striga asiatica HOM05D005697 ORTHO05D006951 8.9e-10 68.2 171 35.7
HPP92_005453 Vanilla planifolia HOM05D005697 ORTHO05D006951 7.5e-09 65.1 194 34.0
unitig_26.g9545 Utricularia gibba HOM05D005697 ORTHO05D006951 9.8e-09 64.7 158 34.2


User provided reference genes

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