Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
THA.LOC104804555 Tarenaya hassleriana HOM05D007001 ORTHO05D005587 3.7e-312 1073.5 542 100.0
THA.LOC104807308 Tarenaya hassleriana HOM05D007001 ORTHO05D005587 4.4e-130 469.2 544 52.4
AL3G52490 Arabidopsis lyrata HOM05D008776 ORTHO05D005587 4.3e-77 293.1 539 42.1
Sp3g29580 Schrenkiella parvula HOM05D008776 ORTHO05D005587 1.3e-73 281.6 539 40.3
Aa31LG8G13740 Aethionema arabicum HOM05D008776 ORTHO05D005587 1.9e-72 277.7 541 40.1
Carub.0003s3009 Capsella rubella HOM05D008776 ORTHO05D005587 4.6e-71 273.1 540 40.7
AT2G16365 Arabidopsis thaliana HOM05D008776 ORTHO05D005587 3.3e-69 266.9 539 39.7
Thhalv10022682m.g Eutrema salsugineum HOM05D008776 ORTHO05D005587 6.5e-65 252.7 540 38.5
BcaB03g16349 Brassica carinata HOM05D008776 ORTHO05D005587 7.2e-64 249.2 529 38.2
BcaB08g34642 Brassica carinata HOM05D008776 ORTHO05D005587 2.2e-57 227.6 532 35.7
A07p04560 Brassica napus HOM05D008776 ORTHO05D005587 3.6e-55 220.3 520 37.3
BraA07t28245Z Brassica rapa HOM05D008776 ORTHO05D005587 3.6e-55 220.3 520 37.3
BcaC06g36144 Brassica carinata HOM05D008776 ORTHO05D005587 1.0e-54 218.8 520 36.3
BolC7t41148H Brassica oleracea HOM05D008776 ORTHO05D005587 1.0e-54 218.8 520 36.3
C07p07280 Brassica napus HOM05D008776 ORTHO05D005587 4.1e-51 206.8 520 35.6
A03p45740 Brassica napus HOM05D008776 ORTHO05D005587 3.2e-48 197.2 528 35.4
BcaC01g03031 Brassica carinata HOM05D008776 ORTHO05D005587 4.2e-48 196.8 358 42.5
C03p56950 Brassica napus HOM05D008776 ORTHO05D005587 4.2e-48 196.8 358 42.5
BolC3t17973H Brassica oleracea HOM05D008776 ORTHO05D005587 4.2e-48 196.8 358 42.5
BraA03t13706Z Brassica rapa HOM05D008776 ORTHO05D005587 5.5e-48 196.4 525 35.6
Atru.chr5.3047 Acer truncatum HOM05D007001 ORTHO05D005587 1.7e-41 174.9 368 35.6
GSVIVG01023803001 Vitis vinifera HOM05D007001 ORTHO05D005587 7.2e-40 169.5 366 33.9
Manes.04G089500 Manihot esculenta HOM05D007001 ORTHO05D005587 1.2e-39 168.7 375 36.8
Haze_02407 Corylus avellana HOM05D007001 ORTHO05D005587 1.6e-39 168.3 360 38.3
Ciclev10027908m.g Citrus clementina HOM05D007001 ORTHO05D005587 6.1e-39 166.4 513 29.8
Duzib052G0704 Durio zibethinus HOM05D007001 ORTHO05D005587 1.0e-38 165.6 364 35.4
Cfa004981 Carpinus fangiana HOM05D007001 ORTHO05D005587 2.3e-38 164.5 459 32.7
COL.COLO4_25959 Corchorus olitorius HOM05D007001 ORTHO05D005587 2.0e-37 161.4 368 34.8
TWI79G0124 Tripterygium wilfordii HOM05D007001 ORTHO05D005587 2.0e-37 161.4 359 37.0
Duzib132G0641 Durio zibethinus HOM05D007001 ORTHO05D005587 2.4e-35 154.5 361 34.3
QL11p044451 Quercus lobata HOM05D007001 ORTHO05D005587 9.1e-35 152.5 442 32.1
Thecc.02G082800 Theobroma cacao HOM05D007001 ORTHO05D005587 9.1e-35 152.5 368 33.4
Gorai.008G029800 Gossypium raimondii HOM05D007001 ORTHO05D005587 2.7e-34 151.0 461 30.4
Gohir.D12G029100 Gossypium hirsutum HOM05D007001 ORTHO05D005587 3.5e-34 150.6 461 30.4
Manes.11G085600 Manihot esculenta HOM05D007001 ORTHO05D005587 5.9e-34 149.8 368 31.8
Rhsim11G0179000 Rhododendron simsii HOM05D007001 ORTHO05D005587 1.0e-33 149.1 642 28.3
TWI31G1402 Tripterygium wilfordii HOM05D007001 ORTHO05D005587 1.3e-33 148.7 497 29.8
Sabra09G0090900 Salix brachista HOM05D007001 ORTHO05D005587 1.1e-32 145.6 365 32.6
CiPaw.05G066600 Carya illinoinensis HOM05D007001 ORTHO05D005587 1.2e-31 142.1 429 32.2
CSS0022058 Camellia sinensis var. sinensis HOM05D007001 ORTHO05D005587 4.7e-31 140.2 358 35.2
Cpa.g.sc17.13 Carica papaya HOM05D007001 ORTHO05D005587 3.0e-30 137.5 390 32.3
Actinidia00536 Actinidia chinensis HOM05D007001 ORTHO05D005587 8.8e-30 136.0 423 33.3
MD10G1072800 Malus domestica HOM05D007001 ORTHO05D005587 2.8e-28 131.0 377 34.2
CiPaw.06G134300 Carya illinoinensis HOM05D007001 ORTHO05D005587 4.5e-26 123.6 388 32.2
MD05G1064100 Malus domestica HOM05D007001 ORTHO05D005587 4.5e-26 123.6 360 31.9
vmacro02090 Vaccinium macrocarpon HOM05D007001 ORTHO05D005587 4.5e-26 123.6 370 33.0
Migut.N01249 Erythranthe guttata HOM05D007001 ORTHO05D005587 7.8e-26 122.9 426 28.4
Actinidia36006 Actinidia chinensis HOM05D007001 ORTHO05D005587 3.8e-25 120.6 342 32.7
TAR376G0762 Trochodendron aralioides HOM05D007001 ORTHO05D005587 3.8e-25 120.6 461 30.2
CARHR106580 Cardamine hirsuta HOM05D008776 ORTHO05D005587 5.0e-25 120.2 191 45.0
Sabra04G0104900 Salix brachista HOM05D007001 ORTHO05D005587 6.6e-25 119.8 458 28.4
Nn5g29665 Nelumbo nucifera HOM05D007001 ORTHO05D005587 8.6e-25 119.4 369 29.5
Eucgr.G01689 Eucalyptus grandis HOM05D007001 ORTHO05D005587 1.5e-24 118.6 366 31.7
A08p16740 Brassica napus HOM05D008776 ORTHO05D005587 2.5e-24 117.9 294 36.4
BraA08t33639Z Brassica rapa HOM05D008776 ORTHO05D005587 2.5e-24 117.9 294 36.4
Potri.009G118651 Populus trichocarpa HOM05D007001 ORTHO05D005587 2.5e-24 117.9 407 29.7
Potri.004G157000 Populus trichocarpa HOM05D007001 ORTHO05D005587 2.1e-23 114.8 389 29.3
Prupe.8G094200 Prunus persica HOM05D007001 ORTHO05D005587 2.1e-23 114.8 453 30.7
Lalb_Chr19g0138701 Lupinus albus HOM05D007001 ORTHO05D005587 3.6e-23 114.0 367 31.3
CARHR106560 Cardamine hirsuta HOM05D008776 ORTHO05D005587 6.1e-23 113.2 337 34.4
Glyma.11G116700 Glycine max HOM05D007001 ORTHO05D005587 2.3e-22 111.3 414 29.2
Lalb_Chr03g0025591 Lupinus albus HOM05D007001 ORTHO05D005587 4.0e-22 110.5 380 30.0
MBI10_g06730_MAGBIO Magnolia biondii HOM05D007001 ORTHO05D005587 8.9e-22 109.4 387 30.5
Nitab4.5_0000308g0260 Nicotiana tabacum HOM05D007001 ORTHO05D005587 8.9e-22 109.4 578 26.8
Cc02_g17350 Coffea canephora HOM05D007001 ORTHO05D005587 1.5e-21 108.6 376 28.7
Nitab4.5_0009972g0010 Nicotiana tabacum HOM05D007001 ORTHO05D005587 5.7e-21 106.7 572 26.4
RcHm_v2.0_Chr6g0265031 Rosa chinensis HOM05D007001 ORTHO05D005587 9.8e-21 105.9 481 28.9
BcaB03g11826 Brassica carinata HOM05D008776 ORTHO05D005587 1.3e-20 105.5 161 41.6
Glyma.12G042500 Glycine max HOM05D007001 ORTHO05D005587 1.3e-20 105.5 366 31.1
Peaxi162Scf00016g00623 Petunia axillaris HOM05D007001 ORTHO05D005587 2.9e-20 104.4 397 28.5
FvH4_2g09190 Fragaria vesca HOM05D007001 ORTHO05D005587 1.8e-19 101.7 485 27.8
AT4G34550 Arabidopsis thaliana HOM05D008776 ORTHO05D005587 4.1e-19 100.5 194 41.8
Oeu029153.2 Olea europaea HOM05D007001 ORTHO05D005587 5.4e-19 100.1 360 29.4
Lj3g0024948 Lotus japonicus HOM05D007001 ORTHO05D005587 7.0e-19 99.8 367 29.4
FAN27G0151 Fragaria x ananassa HOM05D007001 ORTHO05D005587 9.2e-19 99.4 478 26.8
FAN24G0234 Fragaria x ananassa HOM05D007001 ORTHO05D005587 1.2e-18 99.0 485 27.8
Carub.0007s0575 Capsella rubella HOM05D008776 ORTHO05D005587 1.6e-18 98.6 194 42.3
AUR62011300 Chenopodium quinoa HOM05D007001 ORTHO05D005587 2.7e-18 97.8 407 27.5
FAN15G3137 Fragaria x ananassa HOM05D007001 ORTHO05D005587 3.5e-18 97.4 482 28.0
AL7G16670 Arabidopsis lyrata HOM05D008776 ORTHO05D005587 5.9e-18 96.7 155 44.5
Oeu055597.1 Olea europaea HOM05D007001 ORTHO05D005587 5.9e-18 96.7 374 28.1
AUR62016758 Chenopodium quinoa HOM05D007001 ORTHO05D005587 7.8e-18 96.3 408 26.7
SalBow3G2815 Salvia bowleyana HOM05D007001 ORTHO05D005587 1.0e-17 95.9 347 28.5
Phvul.011G044100 Phaseolus vulgaris HOM05D007001 ORTHO05D005587 1.7e-17 95.1 363 29.5
Gohir.A12G029800 Gossypium hirsutum HOM05D007001 ORTHO05D005587 8.6e-17 92.8 165 38.2
PGSC0003DMG400000714 Solanum tuberosum HOM05D007001 ORTHO05D005587 1.9e-16 91.7 645 22.3
Aqoxy5G01586 Aquilegia oxysepala HOM05D007001 ORTHO05D005587 9.5e-16 89.4 398 26.9
MELO3C023308.2 Cucumis melo HOM05D007001 ORTHO05D005587 2.1e-15 88.2 396 28.5
ECA240G0129 Erigeron canadensis HOM05D007001 ORTHO05D005587 2.1e-15 88.2 410 25.4
Solyc01g109780.3 Solanum lycopersicum HOM05D007001 ORTHO05D005587 2.1e-15 88.2 655 22.3
Sopen01g051970 Solanum pennellii HOM05D007001 ORTHO05D005587 2.8e-15 87.8 658 21.1
C05p54830 Brassica napus HOM05D008776 ORTHO05D005587 3.6e-15 87.4 188 37.8
BcaC01g00896 Brassica carinata HOM05D008776 ORTHO05D005587 4.7e-15 87.0 205 37.1
Ca_20889_v3 Cicer arietinum L. HOM05D007001 ORTHO05D005587 4.7e-15 87.0 417 28.1
C04p04170 Brassica napus HOM05D008776 ORTHO05D005587 6.2e-15 86.7 147 41.5
BolC4t22056H Brassica oleracea HOM05D008776 ORTHO05D005587 6.2e-15 86.7 147 41.5
EL10Ac9g21706 Beta vulgaris HOM05D007001 ORTHO05D005587 1.1e-14 85.9 402 26.6
PGR042G0047 Punica granatum HOM05D007001 ORTHO05D005587 1.1e-14 85.9 377 28.9
C01p32810 Brassica napus HOM05D008776 ORTHO05D005587 1.8e-14 85.1 191 36.6
TPR.G22545 Trifolium pratense HOM05D007001 ORTHO05D005587 2.3e-14 84.7 423 27.7
BcaC05g29210 Brassica carinata HOM05D008776 ORTHO05D005587 3.1e-14 84.3 137 41.6
CsaV3_2G014890 Cucumis sativus L. HOM05D007001 ORTHO05D005587 4.0e-14 84.0 408 28.4
HanXRQChr03g0074191 Helianthus annuus HOM05D007001 ORTHO05D005587 4.0e-14 84.0 339 27.4
BcaC05g25214 Brassica carinata HOM05D008776 ORTHO05D005587 5.2e-14 83.6 183 36.6
DCAR_001566 Daucus carota HOM05D007001 ORTHO05D005587 5.2e-14 83.6 362 28.7
Medtr4g070420 Medicago truncatula HOM05D007001 ORTHO05D005587 8.9e-14 82.8 408 27.2
arahy.Tifrunner.gnm1.ann1.M1RWF9 Arachis hypogaea HOM05D007001 ORTHO05D005587 2.0e-13 81.6 392 27.3
BolC5t29828H Brassica oleracea HOM05D008776 ORTHO05D005587 3.4e-13 80.9 188 36.2
SalBow6G2324 Salvia bowleyana HOM05D007001 ORTHO05D005587 4.4e-13 80.5 426 26.5
MBI16_g08804_MAGBIO Magnolia biondii HOM05D007001 ORTHO05D005587 9.8e-13 79.3 356 27.8
arahy.Tifrunner.gnm1.ann1.I3TCZM Arachis hypogaea HOM05D007001 ORTHO05D005587 1.3e-12 79.0 440 26.1
Sed0007775 Sechium edule HOM05D007001 ORTHO05D005587 2.2e-12 78.2 431 27.4
ClCG11G004280 Citrullus lanatus HOM05D007001 ORTHO05D005587 3.7e-12 77.4 430 26.7
Psat7g184200 Pisum sativum HOM05D007001 ORTHO05D005587 1.1e-11 75.9 405 26.7
BcaC02g07919 Brassica carinata HOM05D008776 ORTHO05D005587 4.1e-11 73.9 119 39.5
Peaxi162Scf00003g01121 Petunia axillaris HOM05D007001 ORTHO05D005587 5.4e-11 73.6 304 27.0
C03p85680 Brassica napus HOM05D008776 ORTHO05D005587 7.0e-11 73.2 178 36.5
BolC3t20854H Brassica oleracea HOM05D008776 ORTHO05D005587 7.0e-11 73.2 178 36.5
Hund06244 Selenicereus undatus HOM05D007001 ORTHO05D005587 7.8e-10 69.7 394 24.6
Ah.01g019240 Amaranthus hybridus HOM05D007001 ORTHO05D005587 2.3e-09 68.2 314 28.0
BcaC09g49800 Brassica carinata HOM05D008776 ORTHO05D005587 2.3e-09 68.2 143 38.5
Sc08g0000600 Simmondsia chinensis HOM05D007001 ORTHO05D005587 3.9e-09 67.4 481 25.2
CARHR242860 Cardamine hirsuta HOM05D008776 ORTHO05D005587 1.5e-08 65.5 127 39.4
Nn1g04928 Nelumbo nucifera HOM05D007001 ORTHO05D005587 2.5e-08 64.7 124 35.5
Lalb_Chr01g0002461 Lupinus albus HOM05D007001 ORTHO05D005587 1.6e-07 62.0 220 30.0
PSO675G1875 Papaver somniferum HOM05D007001 ORTHO05D005587 1.6e-07 62.0 375 24.5
Dinv23502 Davidia involucrata HOM05D007001 ORTHO05D005587 2.8e-07 61.2 192 31.2
DCAR_028976 Daucus carota HOM05D007001 ORTHO05D005587 2.3e-06 58.2 278 27.3
C09p31770 Brassica napus HOM05D008776 ORTHO05D042895 6.8e-06 56.6 76 44.7
BolC9t56034H Brassica oleracea HOM05D008776 ORTHO05D042895 6.8e-06 56.6 76 44.7


User provided reference genes

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