Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
THA.LOC104804551 Tarenaya hassleriana HOM05D000443 ORTHO05D006935 4.1e-37 157.9 101 100.0
THA.LOC104804305 Tarenaya hassleriana HOM05D000443 ORTHO05D006935 5.9e-28 127.5 92 92.4
Lsat_1_v5_gn_8_120620 Lactuca sativa HOM05D000443 ORTHO05D006935 4.6e-25 117.9 94 75.5
Actinidia17989 Actinidia chinensis HOM05D000443 ORTHO05D006935 6.1e-25 117.5 92 85.9
Actinidia20580 Actinidia chinensis HOM05D000443 ORTHO05D006935 6.1e-25 117.5 92 85.9
HanXRQChr02g0047201 Helianthus annuus HOM05D000443 ORTHO05D006935 6.1e-25 117.5 92 85.9
Lj4g0010337 Lotus japonicus HOM05D000443 ORTHO05D006935 6.1e-25 117.5 92 82.6
Medtr8g063460 Medicago truncatula HOM05D000443 ORTHO05D006935 6.1e-25 117.5 92 78.3
Hund00097 Selenicereus undatus HOM05D000443 ORTHO05D006935 6.1e-25 117.5 92 85.9
THA.LOC104807412 Tarenaya hassleriana HOM05D000443 ORTHO05D006935 6.1e-25 117.5 92 85.9
Lsat_1_v5_gn_4_71260 Lactuca sativa HOM05D000443 ORTHO05D006935 7.9e-25 117.1 92 85.9
Dinv41862 Davidia involucrata HOM05D000443 ORTHO05D006935 1.0e-24 116.7 92 84.8
ECA234G1622 Erigeron canadensis HOM05D000443 ORTHO05D006935 1.0e-24 116.7 92 84.8
MSTRG.10170 Avicennia marina HOM05D000443 ORTHO05D006935 1.4e-24 116.3 92 84.8
Migut.G00035 Erythranthe guttata HOM05D000443 ORTHO05D006935 1.4e-24 116.3 92 84.8
Nitab4.5_0000303g0260 Nicotiana tabacum HOM05D000443 ORTHO05D001066 1.4e-24 116.3 92 84.8
Peaxi162Scf00268g00613 Petunia axillaris HOM05D000443 ORTHO05D006935 1.4e-24 116.3 92 84.8
Solyc06g065200.4 Solanum lycopersicum HOM05D000443 ORTHO05D006935 1.4e-24 116.3 92 84.8
Sopen06g023700 Solanum pennellii HOM05D000443 ORTHO05D006935 1.4e-24 116.3 92 84.8
PGSC0003DMG400026106 Solanum tuberosum HOM05D000443 ORTHO05D006935 1.4e-24 116.3 92 84.8
Glyma.08G289600 Glycine max HOM05D000443 ORTHO05D006935 1.8e-24 115.9 92 80.4
Glyma.18G134900 Glycine max HOM05D000443 ORTHO05D006935 1.8e-24 115.9 92 80.4
Os08g0511800 Oryza sativa ssp. japonica HOM05D000443 ORTHO05D006935 1.8e-24 115.9 92 84.8
Phvul.003G053800 Phaseolus vulgaris HOM05D000443 ORTHO05D006935 1.8e-24 115.9 92 80.4
VMungo0720G1325 Vigna mungo HOM05D000443 ORTHO05D006935 1.8e-24 115.9 92 80.4
CAN.G308.68 Capsicum annuum HOM05D000443 ORTHO05D006935 2.3e-24 115.5 92 84.8
Cc11_g00630 Coffea canephora HOM05D000443 ORTHO05D006935 2.3e-24 115.5 92 84.8
SalBow8G0190 Salvia bowleyana HOM05D000443 ORTHO05D006935 2.3e-24 115.5 92 77.2
arahy.Tifrunner.gnm1.ann1.8Z4KFF Arachis hypogaea HOM05D000443 ORTHO05D006935 3.0e-24 115.2 92 83.7
arahy.Tifrunner.gnm1.ann1.KHE34K Arachis hypogaea HOM05D000443 ORTHO05D006935 3.0e-24 115.2 92 83.7
arahy.Tifrunner.gnm1.ann1.R1M58Z Arachis hypogaea HOM05D000443 ORTHO05D006935 3.0e-24 115.2 92 83.7
arahy.Tifrunner.gnm1.ann1.X2RL59 Arachis hypogaea HOM05D000443 ORTHO05D006935 3.0e-24 115.2 92 83.7
CDE05G1952 Ceratophyllum demersum HOM05D000443 ORTHO05D006935 3.0e-24 115.2 92 83.7
unitig_62.g23670 Utricularia gibba HOM05D000443 ORTHO05D006935 3.0e-24 115.2 93 83.9
A06p34070 Brassica napus HOM05D000443 ORTHO05D006935 3.9e-24 114.8 92 84.8
BraA06t26340Z Brassica rapa HOM05D000443 ORTHO05D006935 3.9e-24 114.8 92 84.8
DCAR_003345 Daucus carota HOM05D000443 ORTHO05D006935 3.9e-24 114.8 92 82.6
FAN15G1278 Fragaria x ananassa HOM05D000443 ORTHO05D006935 3.9e-24 114.8 92 83.7
FAN24G1683 Fragaria x ananassa HOM05D000443 ORTHO05D006935 3.9e-24 114.8 92 83.7
FAN27G0741 Fragaria x ananassa HOM05D000443 ORTHO05D006935 3.9e-24 114.8 92 83.7
MD10G1142700 Malus domestica HOM05D000443 ORTHO05D006935 3.9e-24 114.8 92 83.7
RcHm_v2.0_Chr6g0281161 Rosa chinensis HOM05D000443 ORTHO05D006935 3.9e-24 114.8 92 83.7
Aa31LG8G14690 Aethionema arabicum HOM05D000443 ORTHO05D006935 5.1e-24 114.4 92 84.8
AL3G50230 Arabidopsis lyrata HOM05D000443 ORTHO05D006935 5.1e-24 114.4 92 84.8
AT2G17350 Arabidopsis thaliana HOM05D000443 ORTHO05D006935 5.1e-24 114.4 92 84.8
BcaB03g16486 Brassica carinata HOM05D000443 ORTHO05D006935 5.1e-24 114.4 92 84.8
BcaB08g34724 Brassica carinata HOM05D000443 ORTHO05D006935 5.1e-24 114.4 92 84.8
BcaC01g02933 Brassica carinata HOM05D000443 ORTHO05D006935 5.1e-24 114.4 92 84.8
BcaC06g36255 Brassica carinata HOM05D000443 ORTHO05D006935 5.1e-24 114.4 92 84.8
A07p03730 Brassica napus HOM05D000443 ORTHO05D006935 5.1e-24 114.4 92 84.8
C03p58190 Brassica napus HOM05D000443 ORTHO05D006935 5.1e-24 114.4 92 84.8
BolC3t18088H Brassica oleracea HOM05D000443 ORTHO05D006935 5.1e-24 114.4 92 84.8
BolC7t41006H Brassica oleracea HOM05D000443 ORTHO05D006935 5.1e-24 114.4 92 84.8
BraA07t28161Z Brassica rapa HOM05D000443 ORTHO05D006935 5.1e-24 114.4 92 84.8
Carub.0003s3138 Capsella rubella HOM05D000443 ORTHO05D006935 5.1e-24 114.4 92 84.8
CARHR107480 Cardamine hirsuta HOM05D000443 ORTHO05D006935 5.1e-24 114.4 92 84.8
Thhalv10022914m.g Eutrema salsugineum HOM05D000443 ORTHO05D006935 5.1e-24 114.4 92 84.8
Prupe.8G181600 Prunus persica HOM05D000443 ORTHO05D006935 5.1e-24 114.4 92 83.7
Sp3g30670 Schrenkiella parvula HOM05D000443 ORTHO05D006935 5.1e-24 114.4 92 84.8
Ah.01g010320 Amaranthus hybridus HOM05D000443 ORTHO05D006935 8.8e-24 113.6 92 83.7
ATR0605G139 Amborella trichopoda HOM05D000443 ORTHO05D006935 8.8e-24 113.6 92 82.6
Oeu022728.1 Olea europaea HOM05D000443 ORTHO05D006935 8.8e-24 113.6 92 78.3
Sc08g0002080 Simmondsia chinensis HOM05D000443 ORTHO05D006935 1.5e-23 112.8 92 82.6
HPP92_018958 Vanilla planifolia HOM05D000443 ORTHO05D006935 1.5e-23 112.8 92 83.7
MD05G1141900 Malus domestica HOM05D000443 ORTHO05D006935 2.0e-23 112.5 92 82.6
Oeu029869.1 Olea europaea HOM05D000443 ORTHO05D006935 2.0e-23 112.5 92 81.5
SGA_v2.0_scaffold157G37346 Striga asiatica HOM05D000443 ORTHO05D006935 2.0e-23 112.5 92 82.6
CiPaw.05G094300 Carya illinoinensis HOM05D000443 ORTHO05D006935 2.5e-23 112.1 92 81.5
EL10Ac9g21552 Beta vulgaris HOM05D000443 ORTHO05D006935 4.3e-23 111.3 92 81.5
AUR62010188 Chenopodium quinoa HOM05D000443 ORTHO05D006935 4.3e-23 111.3 92 81.5
AUR62013189 Chenopodium quinoa HOM05D000443 ORTHO05D006935 4.3e-23 111.3 92 81.5
CSS0021137 Camellia sinensis var. sinensis HOM05D000443 ORTHO05D006935 7.4e-23 110.5 92 81.5
CSS0037601 Camellia sinensis var. sinensis HOM05D000443 ORTHO05D006935 7.4e-23 110.5 92 81.5
HPP92_015754 Vanilla planifolia HOM05D000443 ORTHO05D006935 9.7e-23 110.2 94 78.7
arahy.Tifrunner.gnm1.ann1.5JP8BK Arachis hypogaea HOM05D000443 ORTHO05D006935 1.7e-22 109.4 92 76.1
Pp3c6_23720 Physcomitrium patens HOM05D000443 ORTHO05D006935 1.7e-22 109.4 86 70.9
Thecc.02G147500 Theobroma cacao HOM05D000443 ORTHO05D006935 1.1e-21 106.7 92 80.4
Psat4g126920 Pisum sativum HOM05D000443 ORTHO05D006935 1.8e-21 105.9 92 72.8
Psat4g127000 Pisum sativum HOM05D000443 ORTHO05D006935 1.8e-21 105.9 92 78.3
TWI31G1377 Tripterygium wilfordii HOM05D000443 ORTHO05D006935 2.4e-21 105.5 92 79.3
COL.COLO4_03844 Corchorus olitorius HOM05D000443 ORTHO05D006935 3.1e-21 105.1 92 79.3
Gohir.D02G193500 Gossypium hirsutum HOM05D000443 ORTHO05D006935 3.1e-21 105.1 92 80.4
Gorai.005G216300 Gossypium raimondii HOM05D000443 ORTHO05D006935 3.1e-21 105.1 92 80.4
CANSAT25G1435 Cannabis sativa HOM05D000443 ORTHO05D006935 4.1e-21 104.8 92 79.3
Hma1.2p1_0271F.1_g108700 Hydrangea macrophylla HOM05D000443 ORTHO05D006935 4.1e-21 104.8 92 78.3
Manes.03G097000 Manihot esculenta HOM05D000443 ORTHO05D006935 4.1e-21 104.8 92 79.3
Manes.15G113600 Manihot esculenta HOM05D000443 ORTHO05D006935 4.1e-21 104.8 92 79.3
Nn8g40373 Nelumbo nucifera HOM05D000443 ORTHO05D006935 4.1e-21 104.8 92 79.3
PGR142G2097 Punica granatum HOM05D000443 ORTHO05D006935 4.1e-21 104.8 92 79.3
Sed0000770 Sechium edule HOM05D000443 ORTHO05D006935 4.1e-21 104.8 92 80.4
TWI79G0198 Tripterygium wilfordii HOM05D000443 ORTHO05D006935 4.1e-21 104.8 92 79.3
Zm00001eb316840 Zea mays HOM05D000443 ORTHO05D006935 4.1e-21 104.8 92 79.3
Duzib052G0133 Durio zibethinus HOM05D000443 ORTHO05D006935 5.3e-21 104.4 92 79.3
PSO541G4498 Papaver somniferum HOM05D000443 ORTHO05D006935 5.3e-21 104.4 92 78.3
PSO675G5783 Papaver somniferum HOM05D000443 ORTHO05D006935 5.3e-21 104.4 92 78.3
Potri.009G169200 Populus trichocarpa HOM05D000443 ORTHO05D006935 6.9e-21 104.0 92 78.3
ClCG02G003280 Citrullus lanatus HOM05D000443 ORTHO05D006935 9.1e-21 103.6 92 79.3
MELO3C015698.2 Cucumis melo HOM05D000443 ORTHO05D006935 9.1e-21 103.6 92 79.3
CsaV3_7G002090 Cucumis sativus L. HOM05D000037 ORTHO05D000150 9.1e-21 103.6 92 79.3
Duzib132G0906 Durio zibethinus HOM05D000443 ORTHO05D006935 9.1e-21 103.6 92 79.3
Os09g0491692 Oryza sativa ssp. japonica HOM05D000443 ORTHO05D006935 9.1e-21 103.6 92 78.3
Ciclev10029609m.g Citrus clementina HOM05D000443 ORTHO05D006935 1.2e-20 103.2 92 78.3
Sed0001438 Sechium edule HOM05D000443 ORTHO05D006935 2.0e-20 102.4 92 78.3
Gohir.A03G170400 Gossypium hirsutum HOM05D000443 ORTHO05D006935 3.4e-20 101.7 92 78.3
Atru.chr5.3573 Acer truncatum HOM05D000443 ORTHO05D006935 4.5e-20 101.3 92 77.2
CiPaw.06G114400 Carya illinoinensis HOM05D000443 ORTHO05D006935 4.5e-20 101.3 92 77.2
Lalb_Chr05g0227911 Lupinus albus HOM05D000443 ORTHO05D006935 4.5e-20 101.3 92 77.2
Lj9A408T89 Lonicera japonica HOM05D000443 ORTHO05D006935 5.9e-20 100.9 60 90.0
Aqoxy6G01540 Aquilegia oxysepala HOM05D000443 ORTHO05D006935 7.7e-20 100.5 92 78.3
Haze_01963 Corylus avellana HOM05D000037 ORTHO05D000150 7.7e-20 100.5 131 50.4
TAR628G1273 Trochodendron aralioides HOM05D000443 ORTHO05D006935 7.7e-20 100.5 92 77.2
Migut.G00034 Erythranthe guttata HOM05D000443 ORTHO05D006935 1.7e-19 99.4 86 66.3
QL11p056627 Quercus lobata HOM05D000443 ORTHO05D006935 1.7e-19 99.4 60 88.3
vmacro20019 Vaccinium macrocarpon HOM05D000443 ORTHO05D006935 1.7e-19 99.4 92 76.1
MD05G1142800 Malus domestica HOM05D000443 ORTHO05D006935 2.2e-19 99.0 60 88.3
Ca_14680_v3 Cicer arietinum L. HOM05D000443 ORTHO05D006935 2.9e-19 98.6 60 86.7
ATR0329G054 Amborella trichopoda HOM05D000443 ORTHO05D006935 8.5e-19 97.1 60 86.7
Sabra09G0131200 Salix brachista HOM05D000037 ORTHO05D004802 8.5e-19 97.1 90 75.6
FvH4_2g16970 Fragaria vesca HOM05D000443 ORTHO05D006935 1.4e-18 96.3 58 87.9
Pp3c16_14160 Physcomitrium patens HOM05D000443 ORTHO05D006935 1.4e-18 96.3 84 71.4
ATR0329G065 Amborella trichopoda HOM05D000443 ORTHO05D006935 4.2e-18 94.7 60 85.0
Ca_13829_v3 Cicer arietinum L. HOM05D000443 ORTHO05D006935 4.7e-17 91.3 60 81.7
AagrBONN_evm.TU.Sc2ySwM_362.658 Anthoceros agrestis HOM05D000443 ORTHO05D006935 8.8e-16 87.0 92 67.4
AagrBONN_evm.TU.Sc2ySwM_369.59 Anthoceros agrestis HOM05D000443 ORTHO05D006935 8.8e-16 87.0 92 67.4
Ah.01g017680 Amaranthus hybridus HOM05D000443 ORTHO05D006935 2.0e-15 85.9 92 69.6
TPR.G26885 Trifolium pratense HOM05D000443 ORTHO05D006935 1.1e-13 80.1 60 76.7
CBR_g20399 Chara braunii HOM05D000443 ORTHO05D006935 2.4e-13 79.0 92 57.6
Phvul.010G144400 Phaseolus vulgaris HOM05D000443 ORTHO05D006935 2.5e-10 68.9 47 76.6
SMO358G0470 Selaginella moellendorffii HOM05D000443 ORTHO05D006935 1.2e-09 66.6 92 57.6
Zm00001eb288990 Zea mays HOM05D000443 ORTHO05D006935 1.2e-09 66.6 44 79.5
ClCG02G010820 Citrullus lanatus HOM05D000443 ORTHO05D006935 2.7e-09 65.5 85 55.3
Cc09_g10900 Coffea canephora HOM05D000443 ORTHO05D006935 4.7e-09 64.7 64 79.7
GSVIVG01011124001 Vitis vinifera HOM05D000443 ORTHO05D006935 5.2e-08 61.2 64 78.1
Mapoly0106s0018 Marchantia polymorpha HOM05D000443 ORTHO05D006935 4.8e-06 54.7 93 52.7


User provided reference genes

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