Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
THA.LOC104804500 Tarenaya hassleriana HOM05D007351 ORTHO05D009386 1.3e-114 416.4 200 100.0
Carub.0004s0533 Capsella rubella HOM05D007351 ORTHO05D009386 4.2e-94 348.2 199 84.4
CARHR115710 Cardamine hirsuta HOM05D007351 ORTHO05D009386 4.6e-93 344.7 200 84.5
Aa31sc586G10 Aethionema arabicum HOM05D007351 ORTHO05D009386 4.3e-91 338.2 198 80.8
AL4G17070 Arabidopsis lyrata HOM05D007351 ORTHO05D009386 4.3e-91 338.2 199 82.9
Thhalv10000330m.g Eutrema salsugineum HOM05D007351 ORTHO05D009386 4.3e-91 338.2 198 81.8
BcaC02g08337 Brassica carinata HOM05D007351 ORTHO05D009386 5.7e-91 337.8 201 83.6
C04p55560 Brassica napus HOM05D007351 ORTHO05D009386 5.7e-91 337.8 201 83.6
BolC4t27080H Brassica oleracea HOM05D007351 ORTHO05D009386 5.7e-91 337.8 201 83.6
BraA04t17570Z Brassica rapa HOM05D007351 ORTHO05D009386 5.7e-91 337.8 201 83.6
A04p19820 Brassica napus HOM05D007351 ORTHO05D009386 7.4e-91 337.4 201 83.6
AT2G25605 Arabidopsis thaliana HOM05D007351 ORTHO05D009386 9.7e-91 337.0 200 83.0
BcaB06g28079 Brassica carinata HOM05D007351 ORTHO05D009386 2.8e-90 335.5 201 83.6
Prupe.1G471900 Prunus persica HOM05D007351 ORTHO05D009386 5.5e-86 321.2 202 77.7
COL.COLO4_24001 Corchorus olitorius HOM05D007351 ORTHO05D009386 2.7e-85 318.9 175 86.3
Potri.006G249000 Populus trichocarpa HOM05D007351 ORTHO05D009386 3.6e-85 318.5 200 79.5
TWI34G1290 Tripterygium wilfordii HOM05D007351 ORTHO05D009386 4.6e-85 318.2 168 89.3
GSVIVG01035772001 Vitis vinifera HOM05D007351 ORTHO05D009386 6.1e-85 317.8 201 79.1
Sabra06G0194800 Salix brachista HOM05D007351 ORTHO05D009386 7.9e-85 317.4 200 80.0
Manes.16G118400 Manihot esculenta HOM05D007351 ORTHO05D009386 1.3e-84 316.6 167 89.2
Atru.chr7.2359 Acer truncatum HOM05D007351 ORTHO05D009386 1.8e-84 316.2 198 79.8
Thecc.09G147600 Theobroma cacao HOM05D007351 ORTHO05D009386 3.0e-84 315.5 196 80.1
CiPaw.08G014100 Carya illinoinensis HOM05D007351 ORTHO05D009386 3.9e-84 315.1 200 79.0
FAN24G0983 Fragaria x ananassa HOM05D007351 ORTHO05D009386 6.7e-84 314.3 198 78.3
FvH4_2g29770 Fragaria vesca HOM05D007351 ORTHO05D009386 1.1e-83 313.5 201 78.1
Nn2g11909 Nelumbo nucifera HOM05D007351 ORTHO05D009386 1.1e-83 313.5 204 77.0
MD08G1141900 Malus domestica HOM05D007351 ORTHO05D009386 1.5e-83 313.2 198 78.8
Cpa.g.sc91.32 Carica papaya HOM05D007351 ORTHO05D009386 1.9e-83 312.8 208 77.4
Eucgr.C01805 Eucalyptus grandis HOM05D007351 ORTHO05D009386 4.3e-83 311.6 204 78.4
FAN27G2935 Fragaria x ananassa HOM05D007351 ORTHO05D009386 5.7e-83 311.2 198 78.3
Ciclev10009550m.g Citrus clementina HOM05D007351 ORTHO05D009386 2.2e-82 309.3 198 76.3
TAR625G1337 Trochodendron aralioides HOM05D007351 ORTHO05D009386 2.2e-82 309.3 204 75.5
CSS0046405 Camellia sinensis var. sinensis HOM05D007351 ORTHO05D009386 2.8e-82 308.9 167 87.4
Gorai.004G110800 Gossypium raimondii HOM05D007351 ORTHO05D009386 2.8e-82 308.9 166 86.7
MBI04_g00950_MAGBIO Magnolia biondii HOM05D007351 ORTHO05D009386 2.8e-82 308.9 207 74.9
RcHm_v2.0_Chr6g0298791 Rosa chinensis HOM05D007351 ORTHO05D009386 2.8e-82 308.9 167 85.6
FAN15G3188 Fragaria x ananassa HOM05D007351 ORTHO05D009386 3.7e-82 308.5 198 77.8
Hma1.2p1_0000F.1_g000940 Hydrangea macrophylla HOM05D007351 ORTHO05D009386 4.8e-82 308.1 198 76.3
arahy.Tifrunner.gnm1.ann1.C4YKET Arachis hypogaea HOM05D007351 ORTHO05D009386 8.2e-82 307.4 168 83.9
Actinidia15698 Actinidia chinensis HOM05D007351 ORTHO05D009386 1.4e-81 306.6 198 76.8
PSO017G1621 Papaver somniferum HOM05D007351 ORTHO05D009386 1.8e-81 306.2 188 77.7
PSO170G0157 Papaver somniferum HOM05D007351 ORTHO05D009386 3.1e-81 305.4 166 84.3
Lj8A616G46 Lonicera japonica HOM05D007351 ORTHO05D009386 5.3e-81 304.7 201 75.1
EL10Ac2g02569 Beta vulgaris HOM05D007351 ORTHO05D009386 9.1e-81 303.9 182 79.1
Gohir.A08G090000 Gossypium hirsutum HOM05D007351 ORTHO05D009386 2.0e-80 302.8 165 86.1
Ca_15711_v3 Cicer arietinum L. HOM05D007351 ORTHO05D009386 4.5e-80 301.6 174 78.2
Cc11_g01660 Coffea canephora HOM05D007351 ORTHO05D009386 1.0e-79 300.4 200 74.0
HanXRQChr13g0402411 Helianthus annuus HOM05D007351 ORTHO05D009386 8.5e-79 297.4 189 75.7
Sc06g0000580 Simmondsia chinensis HOM05D007351 ORTHO05D009386 8.5e-79 297.4 167 82.6
Medtr3g107860 Medicago truncatula HOM05D007351 ORTHO05D009386 1.1e-78 297.0 169 78.7
MSTRG.11754 Avicennia marina HOM05D007351 ORTHO05D009386 1.4e-78 296.6 165 83.6
Nitab4.5_0000508g0220 Nicotiana tabacum HOM05D007351 ORTHO05D009386 1.4e-78 296.6 197 74.1
Psat5g027160 Pisum sativum HOM05D007351 ORTHO05D009386 1.4e-78 296.6 167 80.2
PGSC0003DMG400007382 Solanum tuberosum HOM05D007351 ORTHO05D009386 1.9e-78 296.2 198 72.7
Aqoxy7G02003 Aquilegia oxysepala HOM05D007351 ORTHO05D009386 3.2e-78 295.4 192 74.0
arahy.Tifrunner.gnm1.ann1.8MNE4Q Arachis hypogaea HOM05D007351 ORTHO05D009386 3.2e-78 295.4 189 75.1
Peaxi162Scf00251g01128 Petunia axillaris HOM05D007351 ORTHO05D009386 3.2e-78 295.4 168 81.5
Lj1g0014043 Lotus japonicus HOM05D007351 ORTHO05D009386 4.2e-78 295.0 166 81.9
Phvul.009G096100 Phaseolus vulgaris HOM05D007351 ORTHO05D009386 4.2e-78 295.0 167 80.8
Migut.A00300 Erythranthe guttata HOM05D007351 ORTHO05D009386 7.2e-78 294.3 195 73.8
Glyma.06G071600 Glycine max HOM05D007351 ORTHO05D009386 1.2e-77 293.5 167 80.2
SGA_v2.0_scaffold448G51771 Striga asiatica HOM05D007351 ORTHO05D009386 2.1e-77 292.7 170 80.6
Hund03010 Selenicereus undatus HOM05D007351 ORTHO05D009386 2.7e-77 292.4 167 82.0
Solyc08g067430.4 Solanum lycopersicum HOM05D007351 ORTHO05D009386 2.7e-77 292.4 198 72.2
AUR62032351 Chenopodium quinoa HOM05D007351 ORTHO05D009386 3.6e-77 292.0 211 70.1
Lalb_Chr23g0268831 Lupinus albus HOM05D007351 ORTHO05D009386 7.9e-77 290.8 202 71.3
Glyma.04G069700 Glycine max HOM05D007351 ORTHO05D009386 3.0e-76 288.9 167 79.6
TPR.G27335 Trifolium pratense HOM05D007351 ORTHO05D009386 3.0e-76 288.9 170 77.1
Rhsim07G0150700 Rhododendron simsii HOM05D007351 ORTHO05D009386 6.7e-76 287.7 210 69.0
Sed0005695 Sechium edule HOM05D007351 ORTHO05D009386 8.8e-76 287.3 167 78.4
Lsat_1_v5_gn_6_21681 Lactuca sativa HOM05D007351 ORTHO05D009386 1.5e-75 286.6 195 72.8
unitig_32.g11667 Utricularia gibba HOM05D007351 ORTHO05D009386 1.5e-75 286.6 181 77.9
MELO3C003678.2 Cucumis melo HOM05D007351 ORTHO05D009386 2.6e-75 285.8 167 77.8
ECA233G0102 Erigeron canadensis HOM05D007351 ORTHO05D009386 2.6e-75 285.8 203 69.0
CDE06G1133 Ceratophyllum demersum HOM05D007351 ORTHO05D009386 2.2e-74 282.7 169 78.7
Nitab4.5_0002339g0070 Nicotiana tabacum HOM05D007351 ORTHO05D009386 2.2e-74 282.7 202 71.3
ATR0680G179 Amborella trichopoda HOM05D007351 ORTHO05D009386 8.2e-74 280.8 170 79.4
Os05g0574700 Oryza sativa ssp. japonica HOM05D007351 ORTHO05D009386 1.4e-73 280.0 167 78.4
vmacro05202 Vaccinium macrocarpon HOM05D007351 ORTHO05D009386 2.4e-73 279.3 153 83.7
Sopen08g021360 Solanum pennellii HOM05D007351 ORTHO05D009386 1.2e-72 276.9 198 70.2
AUR62041846 Chenopodium quinoa HOM05D007351 ORTHO05D009386 9.4e-70 267.3 164 78.7
Sp4g05090 Schrenkiella parvula HOM05D007351 ORTHO05D009386 4.7e-69 265.0 137 89.8
Duzib150G1343 Durio zibethinus HOM05D007351 ORTHO05D009386 1.8e-68 263.1 167 78.4
VMungo1309G2796 Vigna mungo HOM05D007351 ORTHO05D009386 2.3e-68 262.7 178 72.5
Gohir.D08G102800 Gossypium hirsutum HOM05D007351 ORTHO05D009386 1.7e-66 256.5 141 85.8
QL12p031742 Quercus lobata HOM05D007351 ORTHO05D009386 2.2e-66 256.1 168 76.2
SEGI_27006 Sequoiadendron giganteum HOM05D007351 ORTHO05D009386 4.8e-66 255.0 169 69.8
CsaV3_3G046600 Cucumis sativus L. HOM05D007351 ORTHO05D009386 8.2e-66 254.2 141 82.3
PGR031G1798 Punica granatum HOM05D007351 ORTHO05D009386 8.2e-66 254.2 160 75.6
DCAR_003046 Daucus carota HOM05D007351 ORTHO05D009386 4.1e-65 251.9 141 85.1
CANSAT11G2455 Cannabis sativa HOM05D007351 ORTHO05D009386 1.3e-63 246.9 168 72.0
Mapoly0036s0071 Marchantia polymorpha HOM05D007351 ORTHO05D009386 2.1e-61 239.6 163 67.5
Zm00001eb344390 Zea mays HOM05D007351 ORTHO05D009386 2.1e-61 239.6 175 66.9
Pp3c17_16830 Physcomitrium patens HOM05D007351 ORTHO05D009386 5.3e-57 224.9 171 62.0
SMO269G0024 Selaginella moellendorffii HOM05D007351 ORTHO05D009386 9.1e-57 224.2 163 64.4
Oeu045191.1 Olea europaea HOM05D007351 ORTHO05D009386 2.7e-56 222.6 161 70.8
AagrBONN_evm.TU.Sc2ySwM_228.1243 Anthoceros agrestis HOM05D007351 ORTHO05D009386 2.2e-55 219.5 152 69.1
Haze_21592 Corylus avellana HOM05D007351 ORTHO05D009386 2.2e-55 219.5 111 91.9
CBR_g40414 Chara braunii HOM05D007351 ORTHO05D009386 1.7e-47 193.4 156 58.3
CANSAT54G2502 Cannabis sativa HOM05D007351 ORTHO05D009386 8.6e-47 191.0 139 67.6
Cre17.g746897 Chlamydomonas reinhardtii HOM05D007351 ORTHO05D009386 1.4e-28 130.6 140 45.0
vmacro05206 Vaccinium macrocarpon HOM05D007351 ORTHO05D009386 4.1e-17 92.4 165 37.6
Pp3c16_22900 Physcomitrium patens HOM05D033550 ORTHO05D017832 4.9e-10 68.9 133 36.1
Lsat_1_v5_gn_4_127141 Lactuca sativa HOM05D007351 ORTHO05D009386 5.4e-09 65.5 36 77.8
SMO356G0017 Selaginella moellendorffii HOM05D007351 ORTHO05D017832 1.5e-06 57.4 146 35.6
Cre16.g683300 Chlamydomonas reinhardtii HOM05D027270 ORTHO05D017832 2.5e-06 56.6 133 33.1
SEGI_25541 Sequoiadendron giganteum HOM05D007351 ORTHO05D017832 3.3e-06 56.2 131 31.3


User provided reference genes

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