Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
THA.LOC104800521 Tarenaya hassleriana HOM05D005110 ORTHO05D006074 2.6e-89 332.0 166 100.0
Carub.0004s0802 Capsella rubella HOM05D005110 ORTHO05D006074 1.4e-42 176.8 169 59.2
Thhalv10002110m.g Eutrema salsugineum HOM05D005110 ORTHO05D006074 1.4e-42 176.8 169 60.4
CARHR119990 Cardamine hirsuta HOM05D005110 ORTHO05D006074 1.8e-42 176.4 169 61.5
Sp4g10180 Schrenkiella parvula HOM05D005110 ORTHO05D006074 4.0e-42 175.3 169 58.6
AT2G27385 Arabidopsis thaliana HOM05D005110 ORTHO05D006074 6.9e-42 174.5 169 62.1
BcaB02g10088 Brassica carinata HOM05D005110 ORTHO05D006074 4.5e-41 171.8 162 62.3
AL4G21340 Arabidopsis lyrata HOM05D005110 ORTHO05D006074 7.6e-41 171.0 169 60.9
A07p18150 Brassica napus HOM05D005110 ORTHO05D006074 9.9e-41 170.6 162 61.7
C04p24220 Brassica napus HOM05D005110 ORTHO05D006074 1.3e-40 170.2 169 58.0
BolC4t23920H Brassica oleracea HOM05D005110 ORTHO05D006074 1.3e-40 170.2 169 58.0
BcaC02g10869 Brassica carinata HOM05D005110 ORTHO05D006074 3.8e-40 168.7 169 56.8
BraA07t29533Z Brassica rapa HOM05D005110 ORTHO05D006074 4.9e-40 168.3 162 61.1
Gohir.D05G082600 Gossypium hirsutum HOM05D005110 ORTHO05D006074 6.7e-37 157.9 179 50.3
Gorai.009G084200 Gossypium raimondii HOM05D005110 ORTHO05D006074 6.7e-37 157.9 179 50.3
Gohir.A05G079700 Gossypium hirsutum HOM05D005110 ORTHO05D006074 9.6e-36 154.1 180 50.6
COL.COLO4_34021 Corchorus olitorius HOM05D005110 ORTHO05D006074 2.1e-35 152.9 182 50.5
TWI79G0870 Tripterygium wilfordii HOM05D005110 ORTHO05D006074 2.1e-35 152.9 175 51.4
Duzib168G1438 Durio zibethinus HOM05D005110 ORTHO05D006074 2.4e-34 149.4 183 50.3
Manes.11G163300 Manihot esculenta HOM05D005110 ORTHO05D006074 3.1e-34 149.1 178 48.3
Atru.chr3.3190 Acer truncatum HOM05D005110 ORTHO05D006074 2.0e-33 146.4 179 50.8
Ciclev10029378m.g Citrus clementina HOM05D005110 ORTHO05D006074 2.6e-33 146.0 184 51.6
Lj3g0016581 Lotus japonicus HOM05D005110 ORTHO05D006074 1.0e-32 144.1 172 50.0
QL01p011978 Quercus lobata HOM05D005110 ORTHO05D006074 2.9e-32 142.5 161 49.7
Duzib170G1118 Durio zibethinus HOM05D005110 ORTHO05D006074 3.8e-32 142.1 183 47.5
Thecc.09G280200 Theobroma cacao HOM05D005110 ORTHO05D006074 3.8e-32 142.1 182 46.7
Duzib150G1383 Durio zibethinus HOM05D005110 ORTHO05D006074 4.9e-32 141.7 182 47.3
Dinv22825 Davidia involucrata HOM05D005110 ORTHO05D006074 8.4e-32 141.0 183 46.4
Prupe.6G134300 Prunus persica HOM05D005110 ORTHO05D006074 1.1e-31 140.6 157 51.0
Rhsim13G0112900 Rhododendron simsii HOM05D005110 ORTHO05D006074 3.2e-31 139.0 187 43.3
CiPaw.13G134200 Carya illinoinensis HOM05D005110 ORTHO05D006074 4.2e-31 138.7 184 44.0
GSVIVG01036094001 Vitis vinifera HOM05D005110 ORTHO05D006074 4.2e-31 138.7 180 48.3
Actinidia25117 Actinidia chinensis HOM05D005110 ORTHO05D006074 7.1e-31 137.9 184 45.7
CSS0022586 Camellia sinensis var. sinensis HOM05D005110 ORTHO05D006074 1.2e-30 137.1 160 50.0
Dinv42535 Davidia involucrata HOM05D005110 ORTHO05D006074 2.7e-30 136.0 160 47.5
Glyma.11G182100 Glycine max HOM05D005110 ORTHO05D006074 3.5e-30 135.6 173 46.2
Glyma.13G315400 Glycine max HOM05D005110 ORTHO05D006074 3.5e-30 135.6 173 50.3
Lj3g0002892 Lotus japonicus HOM05D005110 ORTHO05D006074 3.5e-30 135.6 171 48.5
QL01p011992 Quercus lobata HOM05D005110 ORTHO05D006074 4.6e-30 135.2 183 46.4
Medtr2g086680 Medicago truncatula HOM05D005110 ORTHO05D006074 6.0e-30 134.8 171 46.8
Phvul.011G095400 Phaseolus vulgaris HOM05D005110 ORTHO05D006074 6.0e-30 134.8 172 47.7
Potri.009G019300 Populus trichocarpa HOM05D005110 ORTHO05D006074 6.0e-30 134.8 157 49.7
TWI31G0848 Tripterygium wilfordii HOM05D005110 ORTHO05D006074 6.0e-30 134.8 176 48.3
Cpa.g.sc195.13 Carica papaya HOM05D005110 ORTHO05D006074 1.0e-29 134.0 172 45.9
arahy.Tifrunner.gnm1.ann1.XFIF97 Arachis hypogaea HOM05D005110 ORTHO05D006074 1.3e-29 133.7 166 49.4
Hma1.2p1_0587F.1_g184070 Hydrangea macrophylla HOM05D005110 ORTHO05D006074 1.3e-29 133.7 184 41.3
Psat7g142160 Pisum sativum HOM05D005110 ORTHO05D006074 1.3e-29 133.7 154 48.7
Hund18768 Selenicereus undatus HOM05D005110 ORTHO05D006074 1.3e-29 133.7 154 49.4
DCAR_010338 Daucus carota HOM05D005110 ORTHO05D006074 1.8e-29 133.3 182 45.6
Phvul.005G122600 Phaseolus vulgaris HOM05D005110 ORTHO05D006074 3.0e-29 132.5 172 47.7
Glyma.12G091100 Glycine max HOM05D005110 ORTHO05D006074 6.7e-29 131.3 172 47.1
VMungo1080G1295 Vigna mungo HOM05D005110 ORTHO05D006074 6.7e-29 131.3 155 48.4
Cfa009996 Carpinus fangiana HOM05D005110 ORTHO05D006074 8.7e-29 131.0 162 46.9
Eucgr.B03836 Eucalyptus grandis HOM05D005110 ORTHO05D006074 1.1e-28 130.6 194 45.4
Lalb_Chr01g0004911 Lupinus albus HOM05D005110 ORTHO05D006074 1.1e-28 130.6 174 50.0
Lalb_Chr19g0136401 Lupinus albus HOM05D005110 ORTHO05D006074 1.1e-28 130.6 165 48.5
Sopen06g030680 Solanum pennellii HOM05D005110 ORTHO05D006074 1.1e-28 130.6 169 44.4
VMungo1127G0906 Vigna mungo HOM05D005110 ORTHO05D006074 1.1e-28 130.6 174 47.1
FvH4_3g25370 Fragaria vesca HOM05D005110 ORTHO05D006074 1.5e-28 130.2 183 45.9
FAN21G3897 Fragaria x ananassa HOM05D005110 ORTHO05D006074 1.5e-28 130.2 183 45.9
TPR.G17227 Trifolium pratense HOM05D005110 ORTHO05D006074 1.5e-28 130.2 154 47.4
arahy.Tifrunner.gnm1.ann1.EYNG7S Arachis hypogaea HOM05D005110 ORTHO05D006074 1.9e-28 129.8 166 47.6
CANSAT54G0919 Cannabis sativa HOM05D005110 ORTHO05D006074 1.9e-28 129.8 170 45.3
HanXRQChr01g0024471 Helianthus annuus HOM05D005110 ORTHO05D006074 1.9e-28 129.8 177 45.8
FAN11G1413 Fragaria x ananassa HOM05D005110 ORTHO05D006074 2.5e-28 129.4 183 45.9
FAN25G3715 Fragaria x ananassa HOM05D005110 ORTHO05D006074 4.3e-28 128.6 183 45.9
MD03G1148100 Malus domestica HOM05D005110 ORTHO05D006074 4.3e-28 128.6 176 45.5
Migut.D02434 Erythranthe guttata HOM05D005110 ORTHO05D006074 7.4e-28 127.9 157 45.2
Solyc06g074260.4 Solanum lycopersicum HOM05D005110 ORTHO05D006074 7.4e-28 127.9 169 44.4
vmacro03324 Vaccinium macrocarpon HOM05D005110 ORTHO05D006074 7.4e-28 127.9 187 41.7
MD11G1167600 Malus domestica HOM05D005110 ORTHO05D006074 9.6e-28 127.5 176 46.0
PGSC0003DMG400005884 Solanum tuberosum HOM05D005110 ORTHO05D006074 9.6e-28 127.5 169 43.8
DCAR_012208 Daucus carota HOM05D005110 ORTHO05D006074 1.3e-27 127.1 182 43.4
Oeu035569.1 Olea europaea HOM05D005110 ORTHO05D006074 2.1e-27 126.3 178 47.2
SGA_v2.0_scaffold22G09852 Striga asiatica HOM05D005110 ORTHO05D006074 2.1e-27 126.3 180 44.4
CiPaw.14G098700 Carya illinoinensis HOM05D005110 ORTHO05D006074 2.8e-27 125.9 158 48.7
Lalb_Chr03g0028181 Lupinus albus HOM05D005110 ORTHO05D006074 2.8e-27 125.9 179 48.0
CSS0002660 Camellia sinensis var. sinensis HOM05D005110 ORTHO05D006074 3.7e-27 125.6 173 43.9
Actinidia37076 Actinidia chinensis HOM05D005110 ORTHO05D006074 4.8e-27 125.2 157 47.1
Rhsim01G0204600 Rhododendron simsii HOM05D005110 ORTHO05D006074 4.8e-27 125.2 163 46.0
Nn2g14215 Nelumbo nucifera HOM05D005110 ORTHO05D006074 8.2e-27 124.4 189 45.0
Sabra09G0012800 Salix brachista HOM05D005110 ORTHO05D006074 8.2e-27 124.4 176 45.5
MSTRG.21034 Avicennia marina HOM05D005110 ORTHO05D006074 1.1e-26 124.0 181 43.6
Psat5g259000 Pisum sativum HOM05D005110 ORTHO05D006074 1.1e-26 124.0 173 46.2
arahy.Tifrunner.gnm1.ann1.GADS7N Arachis hypogaea HOM05D005110 ORTHO05D006074 1.4e-26 123.6 172 46.5
arahy.Tifrunner.gnm1.ann1.NUG06Z Arachis hypogaea HOM05D005110 ORTHO05D006074 1.4e-26 123.6 158 48.1
AL6G33450 Arabidopsis lyrata HOM05D005110 ORTHO05D006074 3.1e-26 122.5 172 41.9
ECA248G3565 Erigeron canadensis HOM05D005110 ORTHO05D006074 6.9e-26 121.3 176 43.8
Oeu002365.1 Olea europaea HOM05D005110 ORTHO05D006074 1.2e-25 120.6 176 46.0
ClCG02G022270 Citrullus lanatus HOM05D005110 ORTHO05D006074 1.5e-25 120.2 186 43.5
CsaV3_6G038400 Cucumis sativus L. HOM05D005110 ORTHO05D006074 1.5e-25 120.2 187 42.8
Sed0010097 Sechium edule HOM05D005110 ORTHO05D006074 2.0e-25 119.8 182 42.9
AT5G22430 Arabidopsis thaliana HOM05D005110 ORTHO05D006074 2.6e-25 119.4 172 41.9
Lsat_1_v5_gn_1_59041 Lactuca sativa HOM05D005110 ORTHO05D006074 2.6e-25 119.4 164 47.6
MBI17_g32417_MAGBIO Magnolia biondii HOM05D005110 ORTHO05D006074 3.4e-25 119.0 183 43.7
Thhalv10014830m.g Eutrema salsugineum HOM05D005110 ORTHO05D006074 4.5e-25 118.6 172 41.9
Sc06g0008710 Simmondsia chinensis HOM05D005110 ORTHO05D006074 5.8e-25 118.2 162 45.1
BcaB05g22726 Brassica carinata HOM05D005110 ORTHO05D006074 1.3e-24 117.1 172 42.4
BcaB08g36432 Brassica carinata HOM05D000477 ORTHO05D006074 1.3e-24 117.1 177 42.4
BraA02t05659Z Brassica rapa HOM05D005110 ORTHO05D006074 1.3e-24 117.1 172 41.9
CAN.G919.35 Capsicum annuum HOM05D005110 ORTHO05D006074 1.3e-24 117.1 178 43.8
Cc01_g08910 Coffea canephora HOM05D005110 ORTHO05D006074 1.7e-24 116.7 182 45.6
Oeu027156.1 Olea europaea HOM05D005110 ORTHO05D006074 1.7e-24 116.7 176 45.5
BolC2t07157H Brassica oleracea HOM05D005110 ORTHO05D006074 2.2e-24 116.3 172 42.4
SalBow6G3038 Salvia bowleyana HOM05D005110 ORTHO05D006074 2.2e-24 116.3 181 41.4
Carub.0006s2017 Capsella rubella HOM05D005110 ORTHO05D006074 2.9e-24 115.9 172 41.3
Nitab4.5_0000937g0070 Nicotiana tabacum HOM05D005110 ORTHO05D006074 3.8e-24 115.5 148 45.3
PGR102G3267 Punica granatum HOM05D005110 ORTHO05D006074 5.0e-24 115.2 184 46.2
vmacro14345 Vaccinium macrocarpon HOM05D005110 ORTHO05D006074 5.0e-24 115.2 193 40.9
MELO3C014504.2 Cucumis melo HOM05D005110 ORTHO05D006074 6.5e-24 114.8 189 41.3
Nitab4.5_0005472g0010 Nicotiana tabacum HOM05D005110 ORTHO05D006074 6.5e-24 114.8 171 42.7
BNapus_Darmor_BZH_scaffold_38p00660 Brassica napus HOM05D005110 ORTHO05D006074 8.4e-24 114.4 172 40.7
Peaxi162Scf00091g00622 Petunia axillaris HOM05D005110 ORTHO05D006074 8.4e-24 114.4 174 43.7
Sp6g22820 Schrenkiella parvula HOM05D005110 ORTHO05D006074 8.4e-24 114.4 172 41.3
HanXRQChr13g0426031 Helianthus annuus HOM05D005110 ORTHO05D006074 2.5e-23 112.8 181 39.8
MSTRG.18766 Avicennia marina HOM05D005110 ORTHO05D006074 7.1e-23 111.3 176 43.2
THA.LOC104810920 Tarenaya hassleriana HOM05D005110 ORTHO05D006074 1.2e-22 110.5 173 41.6
C02p10870 Brassica napus HOM05D005110 ORTHO05D006074 1.6e-22 110.2 169 39.6
Aa31LG1G13130 Aethionema arabicum HOM05D005110 ORTHO05D006074 4.6e-22 108.6 167 41.3
CARHR191100 Cardamine hirsuta HOM05D005110 ORTHO05D006074 6.1e-22 108.2 171 39.8
Aqoxy4G02728 Aquilegia oxysepala HOM05D005110 ORTHO05D006074 8.7e-21 104.4 179 41.9
TAR369G1010 Trochodendron aralioides HOM05D005110 ORTHO05D006074 2.5e-20 102.8 127 48.0
Lj2P968T16 Lonicera japonica HOM05D005110 ORTHO05D006074 3.3e-20 102.4 121 49.6
ClCG01G012070 Citrullus lanatus HOM05D005110 ORTHO05D006074 4.3e-20 102.1 185 38.9
QL01p011973 Quercus lobata HOM05D005110 ORTHO05D006074 5.7e-20 101.7 183 39.9
CsaV3_1G015850 Cucumis sativus L. HOM05D005110 ORTHO05D006074 1.3e-19 100.5 154 42.2
TAR623G0362 Trochodendron aralioides HOM05D005110 ORTHO05D006074 6.3e-19 98.2 124 47.6
Hund20930 Selenicereus undatus HOM05D005110 ORTHO05D006074 8.2e-19 97.8 130 46.2
CsaV3_1G014930 Cucumis sativus L. HOM05D005110 ORTHO05D006074 1.1e-18 97.4 183 38.8
MELO3C004693.2 Cucumis melo HOM05D005110 ORTHO05D006074 3.1e-18 95.9 184 38.6
BcaC03g13883 Brassica carinata HOM05D005110 ORTHO05D006074 3.4e-17 92.4 144 38.2
HPP92_011908 Vanilla planifolia HOM05D005110 ORTHO05D006074 8.5e-16 87.8 115 47.0
BolC9t58287H Brassica oleracea HOM05D005110 ORTHO05D006074 4.2e-15 85.5 173 36.4
MSTRG.17701 Avicennia marina HOM05D005110 ORTHO05D006074 2.7e-14 82.8 180 39.4
C09p54160 Brassica napus HOM05D005110 ORTHO05D006074 7.9e-14 81.3 172 34.3
ATR0580G107 Amborella trichopoda HOM05D005110 ORTHO05D006074 1.1e-12 77.4 172 34.9
unitig_746.g26607 Utricularia gibba HOM05D005110 ORTHO05D006074 7.4e-12 74.7 177 36.7
Manes.04G002101 Manihot esculenta HOM05D005110 ORTHO05D006074 1.3e-11 73.9 126 40.5
HPP92_005471 Vanilla planifolia HOM05D005110 ORTHO05D006074 1.8e-10 70.1 203 29.1
A10p18400 Brassica napus HOM05D005110 ORTHO05D006074 1.0e-08 64.3 63 54.0
Haze_23356 Corylus avellana HOM05D005110 ORTHO05D006074 1.7e-08 63.5 81 45.7


User provided reference genes

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